def setUp(self):
"""
"""
self.npd_as_list = [
models.NodalPlane(0.5, 0., 90., 0.),
models.NodalPlane(0.5, 90., 90., 180.)
]
self.npd_as_pmf = PMF([(0.5, NodalPlane(0., 90., 0.)),
(0.5, NodalPlane(90., 90., 180.))])
self.npd_as_pmf_bad = PMF([(0.5, None),
(0.5, NodalPlane(90., 90., 180.))])
def test_raises_useful_error(self):
# Test that the source id and name are included with conversion errors,
# to help the users deal with problems in their source models.
area_geom = nrml_models.AreaGeometry(
wkt='POLYGON((0.0 0.0, 1.0 0.0, 0.0 0.0 ))',
upper_seismo_depth=0.0,
lower_seismo_depth=10.0,
)
area_mfd = nrml_models.IncrementalMFD(
min_mag=6.55,
bin_width=0.1,
occur_rates=[
0.0010614989, 8.8291627E-4, 7.3437777E-4, 6.108288E-4,
5.080653E-4
],
)
area_npd = [
nrml_models.NodalPlane(probability=decimal.Decimal("0.3"),
strike=0.0,
dip=90.0,
rake=0.0),
nrml_models.NodalPlane(probability=decimal.Decimal("0.7"),
strike=90.0,
dip=45.0,
rake=90.0),
]
area_hdd = [
nrml_models.HypocentralDepth(probability=decimal.Decimal("0.5"),
depth=4.0),
nrml_models.HypocentralDepth(probability=decimal.Decimal("0.5"),
depth=8.0),
]
area_src = nrml_models.AreaSource(
id='1',
name='Quito',
trt='Active Shallow Crust',
geometry=area_geom,
mag_scale_rel='PeerMSR',
rupt_aspect_ratio=1.5,
mfd=area_mfd,
nodal_plane_dist=area_npd,
hypo_depth_dist=area_hdd,
)
with self.assertRaises(Exception) as ar:
source_input.nrml_to_hazardlib(area_src, MESH_SPACING, BIN_WIDTH,
AREA_SRC_DISC)
expected_error = (
"The following error has occurred with source id='1', "
"name='Quito': Could not create geometry because of errors while "
"reading input.")
self.assertEqual(expected_error, ar.exception.message)
def render_npd(nodal_plane_dist, use_default=False):
'''
Checks to see if nodal plane distribution exists and renders to
an instances of the class openquake.nrmllib.models.NodalPlane
:param nodal_plane_dist:
Nodal plane distribution of a source as either an instance of
:class: openquake.nrmllib.models.NodalPlane or
:class: openquake.hazardlib.pmf.PMF
:param bool use_default:
Boolean flag to opt to use defaults (True) or not. If set to False
then ValueError will be raised if information is missing
:returns:
List of instances of openquake.nrmllib.models.NodalPlane
'''
if isinstance(nodal_plane_dist, list):
for npd in nodal_plane_dist:
assert isinstance(npd, models.NodalPlane)
return nodal_plane_dist
elif isinstance(nodal_plane_dist, PMF):
# Create an instance of openquak.nrmllib.models.NodalPlane
prob_sum = Decimal('0.0')
output_npd = []
for (prob, value) in nodal_plane_dist.data:
prob_sum += Decimal(str(prob))
if not isinstance(value, NodalPlane):
raise ValueError('Nodal Planes incorrectly formatted!')
output_npd.append(
models.NodalPlane(Decimal(str(prob)),
strike=value.strike,
dip=value.dip,
rake=value.rake))
if not prob_sum == Decimal('1.0'):
raise ValueError('Nodal Plane probabilities do not sum to 1.0')
return output_npd
else:
if use_default:
# Use a default nodal plane with strike 0, dip 90 and rake 0.
return [
models.NodalPlane(Decimal('1.0'), strike=0., dip=90., rake=0.)
]
else:
raise ValueError('Nodal Plane distribution not defined')
def write_to_nrml(self,
output_filename,
mmin,
upper_depth=0.,
lower_depth=50.,
source_model_name="POINT SOURCE MODEL",
trt=DEFAULT_TRT,
msr=DEFAULT_MSR,
aspect=ASPECT_RATIO,
hdd=None):
"""
Converts the smoothed seismicity data to a set of oq-nrml point
sources and writes to the output file
"""
writer = SourceModelXMLWriter(output_filename)
source_model = models.SourceModel(source_model_name)
source_model.sources = []
print 'Building source model ...'
for iloc, row in enumerate(self.data):
# Geometry
#trt =(row[18])
geom = models.PointGeometry(
"POINT (%9.4f %9.4f)" % (row[0], row[1]), upper_depth,
lower_depth)
if hdd:
src_hdd = []
#each tuple with probality and depth
for d in hdd:
src_hdd.append(models.HypocentralDepth(d[1], d[0]))
else:
src_hdd = [models.HypocentralDepth(Decimal("1.0"), row[2])]
npd = [models.NodalPlane(1, 0, 90, 0)]
#if row[5]==1:
# npd = [models.NodalPlane(row[6], row[7], row[9], row[8])]
#elif row[5] ==2:
# npd = [models.NodalPlane(row[6], row[7], row[9], row[8]), models.NodalPlane(row[10], row[11], row[13], row[12])]
#else:
# npd = [models.NodalPlane(row[6], row[7], row[9], row[8]), models.NodalPlane(row[10], row[11], row[13], row[12]), models.NodalPlane(row[14], row[15], row[17], row[16])]
source_model.sources.append(
models.PointSource(str(iloc), "PNT_%s" % str(iloc), trt,
geom, msr, aspect,
self.get_mfd(iloc, row,
mmin), npd, src_hdd))
print 'done!'
print 'Writing to file ...'
writer.serialize(source_model)
print 'done!'
def setUp(self):
self.area_source_attrib = dict(
id='1',
name='source A',
trt='Active Shallow Crust',
geometry=nrml_models.AreaGeometry(
upper_seismo_depth=10,
lower_seismo_depth=20,
wkt=('POLYGON((1.0 1.0, 1.0 -1.0, -1.0 -1.0, -1.0 1.0, '
'1.0 1.0))'),
),
mag_scale_rel='WC1994',
rupt_aspect_ratio=1.0,
mfd=None,
nodal_plane_dist=[
nrml_models.NodalPlane(probability=1.0,
strike=0.0,
dip=90.0,
rake=0.0)
],
hypo_depth_dist=[
nrml_models.HypocentralDepth(probability=1.0, depth=10.0)
],
)
self.expected = []
lons = [
-0.100677001712, 0.798645996576, -0.100591068089, 0.798817863822
]
lats = [
0.100830691185, 0.100830691185, -0.798490914733, -0.798490914733
]
for i, (lon, lat) in enumerate(zip(lons, lats)):
point_attrib = self.area_source_attrib.copy()
del point_attrib['geometry']
point_attrib['id'] = '1-%s' % i
point_attrib['name'] = 'source A-%s' % i
pt_source = nrml_models.PointSource(**point_attrib)
pt_source.geometry = nrml_models.PointGeometry(
upper_seismo_depth=10,
lower_seismo_depth=20,
wkt='POINT(%s %s)' % (lon, lat),
)
self.expected.append(pt_source)
def _parse_nodal_plane_dist(cls, src_elem):
"""
:param src_elem:
:class:`lxml.etree._Element` instance representing a source.
:returns:
`list` of :class:`openquake.nrmllib.models.NodalPlane` objects.
"""
npd = []
for elem in _xpath(src_elem, './/nrml:nodalPlane'):
nplane = models.NodalPlane()
nplane.probability = decimal.Decimal(elem.get('probability'))
nplane.strike = float(elem.get('strike'))
nplane.dip = float(elem.get('dip'))
nplane.rake = float(elem.get('rake'))
npd.append(nplane)
return npd
def _parse_nodal_plane_dist(cls, src_elem):
"""
:param src_elem:
:class:`lxml.etree._Element` instance representing a source.
:returns:
`list` of :class:`openquake.nrmllib.models.NodalPlane` objects.
"""
npd = []
value_set = False
for elem in _xpath(src_elem, './/nrml:nodalPlane'):
nplane = models.NodalPlane()
if elem.get('probability'):
nplane.probability = decimal.Decimal(elem.get('probability'))
for attribute in ['strike', 'dip', 'rake']:
if elem.get(attribute):
setattr(nplane, attribute, float(elem.get(attribute)))
value_set = True
npd.append(nplane)
if value_set:
return npd
else:
return None
"""
import argparse
import numpy as np
from decimal import Decimal
from openquake.nrmllib import models
from openquake.nrmllib.hazard.writers import SourceModelXMLWriter
DEFAULT_MSR = "WC1994"
DEFAULT_TRT = "Active Shallow Crust"
ASPECT_RATIO = 1
MIN_MAGNITUDE = 4
DEFAULT_RAKE = 0.
#Probability, Strike, Dip, Rake
NODAL_PLANES = [
models.NodalPlane(Decimal("0.25"), 0., 90., DEFAULT_RAKE),
models.NodalPlane(Decimal("0.25"), 45., 90., DEFAULT_RAKE),
models.NodalPlane(Decimal("0.25"), 90., 90., DEFAULT_RAKE),
models.NodalPlane(Decimal("0.25"), 135., 90., DEFAULT_RAKE)
]
class SmoothedSeismicity2Nrml(object):
"""
Converts hmtk smoothed seismicity output to OQ Point Source Model
"""
def __init__(self, input_filename, bvalue=None, mmax=None):
"""
"""
self.data = np.genfromtxt(input_filename,
delimiter=',',
def _expected_source_model(cls):
# Area:
area_geom = models.AreaGeometry(
wkt=('POLYGON((-122.5 37.5, -121.5 37.5, -121.5 38.5, -122.5 38.5,'
' -122.5 37.5))'),
upper_seismo_depth=0.0,
lower_seismo_depth=10.0,
)
area_mfd = models.IncrementalMFD(
min_mag=6.55,
bin_width=0.1,
occur_rates=[
0.0010614989, 8.8291627E-4, 7.3437777E-4, 6.108288E-4,
5.080653E-4
],
)
area_npd = [
models.NodalPlane(probability=decimal.Decimal("0.3"),
strike=0.0,
dip=90.0,
rake=0.0),
models.NodalPlane(probability=decimal.Decimal("0.7"),
strike=90.0,
dip=45.0,
rake=90.0),
]
area_hdd = [
models.HypocentralDepth(probability=decimal.Decimal("0.5"),
depth=4.0),
models.HypocentralDepth(probability=decimal.Decimal("0.5"),
depth=8.0),
]
area_src = models.AreaSource(
id='1',
name='Quito',
trt='Active Shallow Crust',
geometry=area_geom,
mag_scale_rel='PeerMSR',
rupt_aspect_ratio=1.5,
mfd=area_mfd,
nodal_plane_dist=area_npd,
hypo_depth_dist=area_hdd,
)
# Point:
point_geom = models.PointGeometry(
wkt='POINT(-122.0 38.0)',
upper_seismo_depth=0.0,
lower_seismo_depth=10.0,
)
point_mfd = models.TGRMFD(
a_val=-3.5,
b_val=1.0,
min_mag=5.0,
max_mag=6.5,
)
point_npd = [
models.NodalPlane(probability=decimal.Decimal("0.3"),
strike=0.0,
dip=90.0,
rake=0.0),
models.NodalPlane(probability=decimal.Decimal("0.7"),
strike=90.0,
dip=45.0,
rake=90.0),
]
point_hdd = [
models.HypocentralDepth(probability=decimal.Decimal("0.5"),
depth=4.0),
models.HypocentralDepth(probability=decimal.Decimal("0.5"),
depth=8.0),
]
point_src = models.PointSource(
id='2',
name='point',
trt='Stable Continental Crust',
geometry=point_geom,
mag_scale_rel='WC1994',
rupt_aspect_ratio=0.5,
mfd=point_mfd,
nodal_plane_dist=point_npd,
hypo_depth_dist=point_hdd,
)
# Simple:
simple_geom = models.SimpleFaultGeometry(
wkt='LINESTRING(-121.82290 37.73010, -122.03880 37.87710)',
dip=45.0,
upper_seismo_depth=10.0,
lower_seismo_depth=20.0,
)
simple_mfd = models.IncrementalMFD(
min_mag=5.0,
bin_width=0.1,
occur_rates=[
0.0010614989, 8.8291627E-4, 7.3437777E-4, 6.108288E-4,
5.080653E-4
],
)
simple_src = models.SimpleFaultSource(
id='3',
name='Mount Diablo Thrust',
trt='Active Shallow Crust',
geometry=simple_geom,
mag_scale_rel='WC1994',
rupt_aspect_ratio=1.5,
mfd=simple_mfd,
rake=30.0,
)
# Complex:
complex_geom = models.ComplexFaultGeometry(
top_edge_wkt=('LINESTRING(-124.704 40.363 0.5493260E+01, '
'-124.977 41.214 0.4988560E+01, '
'-125.140 42.096 0.4897340E+01)'),
bottom_edge_wkt=('LINESTRING(-123.829 40.347 0.2038490E+02, '
'-124.137 41.218 0.1741390E+02, '
'-124.252 42.115 0.1752740E+02)'),
int_edges=[
('LINESTRING(-124.704 40.363 0.5593260E+01, '
'-124.977 41.214 0.5088560E+01, '
'-125.140 42.096 0.4997340E+01)'),
('LINESTRING(-124.704 40.363 0.5693260E+01, '
'-124.977 41.214 0.5188560E+01, '
'-125.140 42.096 0.5097340E+01)'),
])
complex_mfd = models.TGRMFD(a_val=-3.5,
b_val=1.0,
min_mag=5.0,
max_mag=6.5)
complex_src = models.ComplexFaultSource(
id='4',
name='Cascadia Megathrust',
trt='Subduction Interface',
geometry=complex_geom,
mag_scale_rel='WC1994',
rupt_aspect_ratio=2.0,
mfd=complex_mfd,
rake=30.0,
)
# 3 Characteristic Sources:
char_src_simple = models.CharacteristicSource(
id='5',
name='characteristic source, simple fault',
trt='Volcanic',
mfd=models.TGRMFD(a_val=-3.5, b_val=1.0, min_mag=5.0, max_mag=6.5),
rake=30.0,
surface=simple_geom)
char_src_complex = models.CharacteristicSource(
id='6',
name='characteristic source, complex fault',
trt='Volcanic',
mfd=models.IncrementalMFD(
min_mag=5.0,
bin_width=0.1,
occur_rates=[
0.0010614989, 8.8291627E-4, 7.3437777E-4, 6.108288E-4,
5.080653E-4
],
),
rake=60.0,
surface=complex_geom)
char_src_multi = models.CharacteristicSource(
id='7',
name='characteristic source, multi surface',
trt='Volcanic',
mfd=models.TGRMFD(a_val=-3.6, b_val=1.0, min_mag=5.2, max_mag=6.4),
rake=90.0)
psurface_1 = models.PlanarSurface(
strike=0.0,
dip=90.0,
top_left=models.Point(longitude=-1.0, latitude=1.0, depth=21.0),
top_right=models.Point(longitude=1.0, latitude=1.0, depth=21.0),
bottom_left=models.Point(longitude=-1.0, latitude=-1.0,
depth=59.0),
bottom_right=models.Point(longitude=1.0, latitude=-1.0,
depth=59.0),
)
psurface_2 = models.PlanarSurface(
strike=20.0,
dip=45.0,
top_left=models.Point(longitude=1.0, latitude=1.0, depth=20.0),
top_right=models.Point(longitude=3.0, latitude=1.0, depth=20.0),
bottom_left=models.Point(longitude=1.0, latitude=-1.0, depth=80.0),
bottom_right=models.Point(longitude=3.0, latitude=-1.0,
depth=80.0),
)
char_src_multi.surface = [psurface_1, psurface_2]
source_model = models.SourceModel()
source_model.name = 'Some Source Model'
# Generator:
source_model.sources = (x for x in [
area_src, point_src, simple_src, complex_src, char_src_simple,
char_src_complex, char_src_multi
])
return source_model
trt = "stable crust",
geometry = geo.Polygon([geo.Point(-58.73, -10.33),
geo.Point(-58.74, -13.54),
geo.Point(-55.94, -13.59),
geo.Point(-56.58, -10.31),
geo.Point(-58.73, -10.33)]),
upper_depth = "0",
lower_depth = "30",
mag_scale_rel = "WC1994", # default
rupt_aspect_ratio = 1,
mfd = models.TGRMFD(min_mag=3.0,
max_mag=7.0,
b_val=0.847,
a_val=0.737),
nodal_plane_dist = models.NodalPlane(Decimal('1.0'),
strike=0.,
dip=90.,
rake=0.),
hypo_depth_dist = None)
#a.create_oqnrml_source
s = source_model.mtkSourceModel(identifier="09",
name = "sources model name",
sources = [a])
s.serialise_to_nrml(filename = "s03.xml",
use_defaults = True)
#