def test_validate_nonempty_file_fails(self):
"""
Test: Raise IOError if file found but empty
"""
validate_nonempty_file(EMPTY_REL_PATH)
def args_runner(args):
validate_nonempty_file(args.log_file)
amplicon_analysis_timing(args.log_file, args.report_json)
return 0
def test_validate_nonempty_file(self):
"""
Test: Return abspath if file found and not empty
"""
file_path = validate_nonempty_file(DATA_REL_PATH)
self.assertEqual(file_path, DATA_ABS_PATH)
def args_runner(args):
validate_nonempty_file(args.report_csv)
amplicon_analysis_consensus(args.report_csv, args.report_json)
return 0
def args_runner(args):
validate_nonempty_file(args.log_file)
amplicon_analysis_timing(args.log_file, args.report_json)
return 0
def args_runner(args):
validate_nonempty_file(args.report_csv)
amplicon_analysis_consensus(args.report_csv, args.report_json)
return 0
def test_validate_nonempty_file_fails(self):
"""
Test: Raise IOError if file found but empty
"""
validate_nonempty_file( EMPTY_REL_PATH )
def test_validate_nonempty_file(self):
"""
Test: Return abspath if file found and not empty
"""
file_path = validate_nonempty_file( DATA_REL_PATH )
self.assertEqual( file_path, DATA_ABS_PATH )