def test_RadHydroMMS(self):
# declare symbolic variables
x, t, alpha, c, a, mu = symbols('x t alpha c a mu')
# number of refinement cycles
n_cycles = 5
# number of elements in first cycle
n_elems = 20
# We will increase sigma and nondimensional C as we decrease the mesh
# size to ensure we stay in the diffusion limit
# numeric values
gamma_value = 5./3.
cv_value = 0.14472799784454
# run for a fixed amount of time
t_end = 2.*pi
sig_s = 0.0
#Want material speeed to be a small fraction of speed of light
#and radiation to be small relative to kinetic energy
P = 0.001 # a_r T_inf^4/(rho_inf*u_inf^2)
#Arbitrary ratio of pressure to density
alpha_value = 0.5
#Arbitrary mach number well below the sound speed. The choice of gamma and
#the cv value, as well as C and P constrain all other material reference
#parameters, but we are free to choose the material velocity below the sound
#speed to ensure no shocks are formed
M = 0.9
cfl_value = 0.6 #but 2 time steps, so really like a CFL of 0.3
dt = []
dx = []
err = []
for cycle in range(n_cycles):
#Keep ratio of and sig_a*dx constant, staying in diffusion limit
C = sig_a = 100000./20*n_elems # c/a_inf
sig_t = sig_s + sig_a
a_inf = GC.SPD_OF_LGT/C
#These lines of code assume specified C_v
T_inf = a_inf**2/(gamma_value*(gamma_value-1.)*cv_value)
rho_inf = GC.RAD_CONSTANT*T_inf**4/(P*a_inf**2)
#Specify rho_inf and determine T_inf and Cv_value
rho_inf = 1.0 #If we don't choose a reference density, then the specific heat values get ridiculous
T_inf = pow(rho_inf*P*a_inf**2/GC.RAD_CONSTANT,0.25) #to set T_inf based on rho_inf,
cv_value = a_inf**2/(T_inf*gamma_value*(gamma_value-1.)) # to set c_v, if rho specified
#Specify T_inf and solve for rho_inf and C_v value
# T_inf = 1
# rho_inf = GC.RAD_CONSTANT*T_inf**4/(P*a_inf**2)
# cv_value = a_inf**2/(T_inf*gamma_value*(gamma_value-1.)) # to set c_v, if rho specified
#Same for all approachs
p_inf = rho_inf*a_inf*a_inf
print "The dimensionalization parameters are: "
print " a_inf : ", a_inf
print " T_inf : ", T_inf
print " rho_inf : ", rho_inf
print " p_inf : ", p_inf
print " C_v : ", cv_value
print " gamma : ", gamma_value
# create solution for thermodynamic state and flow field
rho = rho_inf*(2. + sin(x-t))
u = a_inf*M*0.5*(2. + cos(x-t))
p = alpha_value*p_inf*(2. + cos(x-t))
e = p/(rho*(gamma_value-1.))
E = 0.5*rho*u*u + rho*e
# create solution for radiation field based on solution for F
# that is the leading order diffusion limit solution
T = e/cv_value
Er = a*T**4
Fr = -1./(3.*sig_t)*c*diff(Er,x) + sympify('4./3.')*Er*u
#Form psi+ and psi- from Fr and Er
psip = (Er*c*mu + Fr)/(2.*mu)
psim = (Er*c*mu - Fr)/(2.*mu)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
substitutions['c'] = GC.SPD_OF_LGT
substitutions['a'] = GC.RAD_CONSTANT
substitutions['mu'] = RU.mu["+"]
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho*u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
T = T.subs(substitutions)
rho_f = lambdify((symbols('x'),symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'),symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'),symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'),symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'),symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'),symbols('t')), psip, "numpy")
T_f = lambdify((symbols('x'),symbols('t')), T, "numpy")
Er = Er.subs(substitutions)
Er = lambdify((symbols('x'),symbols('t')), Er, "numpy")
#For reference create lambda as ratio of aT^4/rho--u^2 to check
#P_f = lambda x,t: GC.RAD_CONSTANT*T_f(x,t)**4/(rho_f(x,t)*u_f(x,t)**2)
#dx = 1./100.
#x = -1.*dx
#t=0.2
#for i in range(100):
# x += dx
# print "ratio:", P_f(x,t)
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho = rho,
u = u,
E = E,
psim = psim,
psip = psip,
sigma_s_value = sig_s,
sigma_a_value = sig_a,
gamma_value = gamma_value,
cv_value = cv_value,
alpha_value = alpha_value,
display_equations = True)
# mesh
width = 2.*pi
mesh = Mesh(n_elems,width)
# compute hydro IC for the sake of computing initial time step size
hydro_IC = computeAnalyticHydroSolution(mesh,t=0.0,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# compute the initial time step size according to CFL conditon (actually
# half). We will then decrease this time step by the same factor as DX each
# cycle
if cycle == 0:
sound_speed = [sqrt(i.p * i.gamma / i.rho) + abs(i.u) for i in hydro_IC]
dt_vals = [cfl_value*(mesh.elements[i].dx)/sound_speed[i]
for i in xrange(len(hydro_IC))]
dt_value = min(min(dt_vals),0.5) #don't take too big of time step
print "initial dt_value", dt_value
#Adjust the end time to be an exact increment of dt_values
print "old t_end: ", t_end
print "new t_end: ", t_end
print "This cycle's dt value: ", dt_value
# create uniform mesh
mesh = Mesh(n_elems, width)
dt.append(dt_value)
dx.append(mesh.getElement(0).dx)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# create rad BC object
rad_BC = RadBC(mesh, 'periodic')
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,t=0.0,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# Dimensionless parameters. These are all evaluated at peaks of trig
# functions, very hard coded
print "---------------------------------------------"
print " Diffusion limit info:"
print "---------------------------------------------"
print "Size in mfp of cell", mesh.getElement(0).dx*sig_t
print "Ratio of radiation energy to kinetic", Er(0.75,0)/(rho_f(0.25,0)*u_f(0.0,0)**2), GC.RAD_CONSTANT*T_inf**4/(rho_inf*a_inf**2)
print "Ratio of speed of light to material sound speed", GC.SPD_OF_LGT/u_f(0.0,0), GC.SPD_OF_LGT/(a_inf)
print "---------------------------------------------"
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s+sig_a),
ConstantCrossSection(sig_s, sig_s+sig_a))
for i in xrange(mesh.n_elems)]
# transient options
t_start = 0.0
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
#slope limiter
limiter = 'double-minmod'
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'constant',
dt_constant = dt_value,
slope_limiter = limiter,
time_stepper = 'BDF2',
use_2_cycles = True,
t_start = t_start,
t_end = t_end,
rad_BC = rad_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
hydro_BC = hydro_BC,
mom_src = mom_src,
E_src = E_src,
rho_src = rho_src,
psim_src = psim_src,
psip_src = psip_src,
verbosity = verbosity,
rho_f =rho_f,
u_f = u_f,
E_f = E_f,
gamma_value = gamma_value,
cv_value = cv_value,
check_balance = True)
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
rad_exact = computeAnalyticRadSolution(mesh, t_end,psim=psim_f,psip=psip_f)
#Compute error
err.append(computeHydroL2Error(hydro_new, hydro_exact, rad_new, rad_exact ))
n_elems *= 2
dt_value *= 0.5
# compute convergence rates
rates_dx = computeHydroConvergenceRates(dx,err)
rates_dt = computeHydroConvergenceRates(dt,err)
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(dx,err,rates=rates_dx,
dx_desc='dx',err_desc='$L_2$')
printHydroConvergenceTable(dt,err,rates=rates_dt,
dx_desc='dt',err_desc='$L_2$')
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, x_exact=mesh.getCellCenters(),exact=hydro_exact)
#plot exact and our E_r
Er_exact_fn = 1./GC.SPD_OF_LGT*(psim + psip)
Fr_exact_fn = (psip - psim)*RU.mu["+"]
Er_exact = []
Fr_exact = []
psip_exact = []
psim_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x':xi, 't':t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
Fr_exact.append(Fr_exact_fn.subs(substitutions))
psip_exact.append(psip_f(xi,t_end))
psim_exact.append(psim_f(xi,t_end))
plotRadErg(mesh, rad_new.E, Fr_edge=rad_new.F, exact_Er=Er_exact, exact_Fr =
Fr_exact)
plotS2Erg(mesh, rad_new.psim, rad_new.psip, exact_psim=psim_exact,
exact_psip=psip_exact)
plotTemperatures(mesh, rad_new.E, hydro_states=hydro_new, print_values=True)
#Make a pickle to save the error tables
from sys import argv
pickname = "results/testRadHydroDiffMMS.pickle"
if len(argv) > 2:
if argv[1] == "-o":
pickname = argv[2].strip()
#Create dictionary of all the data
big_dic = {"dx": dx}
big_dic["dt"] = dt
big_dic["Errors"] = err
pickle.dump( big_dic, open( pickname, "w") )
def test_HydroMMS(self):
# slope limiter: choices are:
# none step minmod double-minmod superbee minbee vanleer
slope_limiter = 'none'
# number of elements in first cycle
n_elems = 50
# number of refinement cycles
n_cycles = 1
# end time
t_end = 0.1
# choice of solutions for hydro
hydro_case = "linear" # constant linear exponential
# declare symbolic variables
x, t, alpha = symbols('x t alpha')
# create solution for thermodynamic state and flow field
if hydro_case == "constant":
rho = sympify('4.0')
u = sympify('1.2')
E = sympify('10.0')
elif hydro_case == "linear":
rho = 1 + x - t
u = sympify('1')
E = 5 + 5 * (x - 0.5)**2
elif hydro_case == "exponential":
rho = exp(x + t) + 5
u = exp(-x) * sin(t) - 1
E = 10 * exp(x + t)
else:
raise NotImplementedError("Invalid hydro test case")
# create solution for radiation field
psim = sympify('0')
psip = sympify('0')
# numeric values
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 1.0
sig_a = 0.0
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsHydroOnly(
rho=rho,
u=u,
E=E,
gamma_value=gamma_value,
cv_value=cv_value,
alpha_value=alpha_value,
display_equations=False)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho * u
E = E.subs(substitutions)
rho_f = lambdify((symbols('x'), symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'), symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'), symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'), symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'), symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'), symbols('t')), psip, "numpy")
# spatial and temporal domains
width = 1.0
# initialize lists for mesh size and L1 error for each cycle
max_dx = list()
err = list()
# loop over refinement cycles
for cycle in xrange(n_cycles):
if __name__ == '__main__':
print("\nCycle %d of %d: n_elems = %d" %
(cycle + 1, n_cycles, n_elems))
# create uniform mesh
mesh = Mesh(n_elems, width)
# append max dx for this cycle to list
max_dx.append(mesh.max_dx)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
#Make rad BC object with vacuum for hydro only
rad_BC = RadBC(mesh, "vacuum")
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,
t=0.0,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='dirichlet',
mesh=mesh,
rho_BC=rho_f,
mom_BC=mom_f,
erg_BC=E_f)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s + sig_a),
ConstantCrossSection(sig_s, sig_s + sig_a))
for i in xrange(mesh.n_elems)]
# if run standalone, then be verbose
if __name__ == '__main__':
if n_cycles == 1:
verbosity = 2
else:
verbosity = 1
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh=mesh,
problem_type='rad_hydro',
dt_option='CFL',
CFL=0.5,
slope_limiter=slope_limiter,
time_stepper='BDF2',
use_2_cycles=True,
t_start=0.0,
t_end=t_end,
rad_BC=rad_BC,
hydro_BC=hydro_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
mom_src=mom_src,
E_src=E_src,
psim_src=psim_src,
psip_src=psip_src,
rho_src=rho_src,
verbosity=verbosity,
check_balance=False,
rho_f=rho_f,
u_f=u_f,
E_f=E_f,
gamma_value=gamma_value,
cv_value=cv_value)
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# compute error
err.append(computeHydroL2Error(hydro_new, hydro_exact))
# double number of elements for next cycle
n_elems *= 2
# compute convergence rates
rates = computeHydroConvergenceRates(max_dx, err)
# print convergence table and plot
if __name__ == '__main__':
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(max_dx,
err,
rates=rates,
dx_desc='dx',
err_desc='L2')
# plot hydro solution
plotHydroSolutions(mesh,
hydro_new,
x_exact=mesh.getCellCenters(),
exact=hydro_exact)
def test_RadHydroMMS(self):
# declare symbolic variables
x, t, alpha, c = symbols('x t alpha c')
# numeric values
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 1.0
sig_a = 1.0
# create solution for thermodynamic state and flow field
# rho = sympify('4.0')
# u = sympify('1.0')
# E = sympify('10.0')
rho = 2. + sin(2*pi*x+t)
u = 2. + cos(2*pi*x-t)
p = 2. + cos(2*pi*x+t)
e = p/(rho*(gamma_value-1.))
E = 0.5*rho*u*u + rho*e
# create solution for radiation field
rad_scale = 50*c
psim = rad_scale*(2*t*sin(pi*(1-x))+2+0.1*t)
psip = rad_scale*(t*sin(pi*x)+2+0.1*t)
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho = rho,
u = u,
E = E,
psim = psim,
psip = psip,
sigma_s_value = sig_s,
sigma_a_value = sig_a,
gamma_value = gamma_value,
cv_value = cv_value,
alpha_value = alpha_value,
display_equations = True)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
substitutions['c'] = GC.SPD_OF_LGT
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho*u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
rho_f = lambdify((symbols('x'),symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'),symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'),symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'),symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'),symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'),symbols('t')), psip, "numpy")
# create uniform mesh
n_elems = 50
width = 1.0
mesh = Mesh(n_elems, width)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# create rad BC object
rad_BC = RadBC(mesh, 'dirichlet',psip_BC=psip_f,psim_BC=psim_f)
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,t=0.0,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s+sig_a),
ConstantCrossSection(sig_s, sig_s+sig_a))
for i in xrange(mesh.n_elems)]
# transient options
t_start = 0.0
# t_end = 0.005
t_end = 0.02
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
#slope limiter
limiter = 'none'
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'CFL',
CFL = 0.5,
# dt_option = 'constant',
# dt_constant = 0.0002,
slope_limiter = limiter,
time_stepper = 'BDF2',
use_2_cycles = True,
t_start = t_start,
t_end = t_end,
rad_BC = rad_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
hydro_BC = hydro_BC,
mom_src = mom_src,
E_src = E_src,
rho_src = rho_src,
psim_src = psim_src,
psip_src = psip_src,
verbosity = verbosity,
rho_f =rho_f,
u_f = u_f,
E_f = E_f,
gamma_value = gamma_value,
cv_value = cv_value,
check_balance = True)
# plot
if __name__ == '__main__':
# plot radiation solution
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, x_exact=mesh.getCellCenters(),exact=hydro_exact)
#plot exact and our E_r
Er_exact_fn = 1./GC.SPD_OF_LGT*(psim + psip)
Er_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x':xi, 't':t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
plotRadErg(mesh, rad_new.E, exact_Er=Er_exact)
def test_HydroMMS(self):
# slope limiter: choices are:
# none step minmod double-minmod superbee minbee vanleer
slope_limiter = 'none'
# number of elements in first cycle
n_elems = 50
# number of refinement cycles
n_cycles = 1
# end time
t_end = 0.1
# choice of solutions for hydro
hydro_case = "linear" # constant linear exponential
# declare symbolic variables
x, t, alpha = symbols('x t alpha')
# create solution for thermodynamic state and flow field
if hydro_case == "constant":
rho = sympify('4.0')
u = sympify('1.2')
E = sympify('10.0')
elif hydro_case == "linear":
rho = 1 + x - t
u = sympify('1')
E = 5 + 5*(x - 0.5)**2
elif hydro_case == "exponential":
rho = exp(x+t)+5
u = exp(-x)*sin(t) - 1
E = 10*exp(x+t)
else:
raise NotImplementedError("Invalid hydro test case")
# create solution for radiation field
psim = sympify('0')
psip = sympify('0')
# numeric values
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 1.0
sig_a = 0.0
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsHydroOnly(
rho = rho,
u = u,
E = E,
gamma_value = gamma_value,
cv_value = cv_value,
alpha_value = alpha_value,
display_equations = False)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho*u
E = E.subs(substitutions)
rho_f = lambdify((symbols('x'),symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'),symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'),symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'),symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'),symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'),symbols('t')), psip, "numpy")
# spatial and temporal domains
width = 1.0
# initialize lists for mesh size and L1 error for each cycle
max_dx = list()
err = list()
# loop over refinement cycles
for cycle in xrange(n_cycles):
if __name__ == '__main__':
print("\nCycle %d of %d: n_elems = %d" % (cycle+1,n_cycles,n_elems))
# create uniform mesh
mesh = Mesh(n_elems, width)
# append max dx for this cycle to list
max_dx.append(mesh.max_dx)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
#Make rad BC object with vacuum for hydro only
rad_BC = RadBC(mesh, "vacuum")
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh, t=0.0,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='dirichlet', mesh=mesh, rho_BC=rho_f,
mom_BC=mom_f, erg_BC=E_f)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s+sig_a),
ConstantCrossSection(sig_s, sig_s+sig_a))
for i in xrange(mesh.n_elems)]
# if run standalone, then be verbose
if __name__ == '__main__':
if n_cycles == 1:
verbosity = 2
else:
verbosity = 1
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'CFL',
CFL = 0.5,
slope_limiter = slope_limiter,
time_stepper = 'BDF2',
use_2_cycles = True,
t_start = 0.0,
t_end = t_end,
rad_BC = rad_BC,
hydro_BC = hydro_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
mom_src = mom_src,
E_src = E_src,
psim_src = psim_src,
psip_src = psip_src,
rho_src = rho_src,
verbosity = verbosity,
check_balance = False,
rho_f = rho_f,
u_f = u_f,
E_f = E_f,
gamma_value = gamma_value,
cv_value = cv_value )
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# compute error
err.append(computeHydroL2Error(hydro_new, hydro_exact))
# double number of elements for next cycle
n_elems *= 2
# compute convergence rates
rates = computeHydroConvergenceRates(max_dx,err)
# print convergence table and plot
if __name__ == '__main__':
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(max_dx,err,rates=rates,
dx_desc='dx',err_desc='L2')
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, x_exact=mesh.getCellCenters(),
exact=hydro_exact)
def solveHydroProblem():
# option to print solution
print_solution = False
#-------------------------------------------------------------------------------
# Construct initial hydro states, probably create an initializer class
#-------------------------------------------------------------------------------
width = 1.0
t_end = 0.05
t = 0.0
cfl = 0.5
n = 500
#Left and right BC and initial values
gamma = 1.4 #gas constant
p_left = 1.0
u_left = .750
rho_left = 1.
p_right = 0.1
u_right = 0.0
rho_right = 0.125
#made up spec heat
spec_heat = 1.0
#Create a mesh, currently hardcoded
mesh = Mesh(n, width)
dx = mesh.getElement(0).dx
if n % 2 != 0: #simple error raise, % has lots of diff meanings in python
raise ValueError("Must be even number of cells")
i_left = int(0.3*n)
i_right = int(0.7*n)
#Create cell centered variables
states_a = [HydroState(u=u_left,p=p_left,gamma=gamma,rho=rho_left,
spec_heat=spec_heat) for i in range(i_left)]
states_a = states_a + [HydroState(u=u_right,p=p_right,gamma=gamma,
spec_heat=spec_heat,rho=rho_right) for i in range(i_right)]
# initialize BC object
bc = HydroBC(bc_type='reflective', mesh=mesh)
#-----------------------------------------------------------------
# Solve Problem
#----------------------------------------------------------------
#loop over time steps
time_index = 0
while (t < t_end):
# increment time index
time_index += 1
#Compute a new time step size based on CFL
c = [sqrt(i.p*i.gamma/i.rho)+abs(i.u) for i in states_a]
dt_vals = [cfl*(mesh.elements[i].dx)/c[i] for i in range(len(c))]
dt = min(dt_vals)
t += dt
#shorten last step to be exact
if (t > t_end):
t -= dt
dt = t_end - t + 0.000000001
t += dt
print("Time step %d: t = %f -> %f" % (time_index,t-dt,t))
# update boundary values
bc.update(states=states_a, t=t-dt)
# compute slopes
slopes = HydroSlopes(states_a, bc=bc)
#Solve predictor step
states_a = hydroPredictor(mesh, states_a, slopes, dt)
# update boundary values
bc.update(states=states_a, t=t-0.5*dt)
#Solve corrector step
states_a = hydroCorrector(mesh, states_a, dt, bc=bc)
# plot solution
plotHydroSolutions(mesh,states=states_a)
# print solution
if print_solution:
for state in states_a:
print state
def test_RadHydroMMS(self):
# declare symbolic variables
x, t, alpha, c, a, mu = symbols('x t alpha c a mu')
# number of refinement cycles
n_cycles = 5
# number of elements in first cycle
n_elems = 20
# We will increase sigma and nondimensional C as we decrease the mesh
# size to ensure we stay in the diffusion limit
# numeric values
gamma_value = 5. / 3.
cv_value = 0.14472799784454
# run for a fixed amount of time
t_end = 2. * pi
sig_s = 0.0
#Want material speeed to be a small fraction of speed of light
#and radiation to be small relative to kinetic energy
P = 0.001 # a_r T_inf^4/(rho_inf*u_inf^2)
#Arbitrary ratio of pressure to density
alpha_value = 0.5
#Arbitrary mach number well below the sound speed. The choice of gamma and
#the cv value, as well as C and P constrain all other material reference
#parameters, but we are free to choose the material velocity below the sound
#speed to ensure no shocks are formed
M = 0.9
cfl_value = 0.6 #but 2 time steps, so really like a CFL of 0.3
dt = []
dx = []
err = []
for cycle in range(n_cycles):
#Keep ratio of and sig_a*dx constant, staying in diffusion limit
C = sig_a = 100000. / 20 * n_elems # c/a_inf
sig_t = sig_s + sig_a
a_inf = GC.SPD_OF_LGT / C
#These lines of code assume specified C_v
T_inf = a_inf**2 / (gamma_value * (gamma_value - 1.) * cv_value)
rho_inf = GC.RAD_CONSTANT * T_inf**4 / (P * a_inf**2)
#Specify rho_inf and determine T_inf and Cv_value
rho_inf = 1.0 #If we don't choose a reference density, then the specific heat values get ridiculous
T_inf = pow(rho_inf * P * a_inf**2 / GC.RAD_CONSTANT,
0.25) #to set T_inf based on rho_inf,
cv_value = a_inf**2 / (T_inf * gamma_value * (gamma_value - 1.)
) # to set c_v, if rho specified
#Specify T_inf and solve for rho_inf and C_v value
# T_inf = 1
# rho_inf = GC.RAD_CONSTANT*T_inf**4/(P*a_inf**2)
# cv_value = a_inf**2/(T_inf*gamma_value*(gamma_value-1.)) # to set c_v, if rho specified
#Same for all approachs
p_inf = rho_inf * a_inf * a_inf
print "The dimensionalization parameters are: "
print " a_inf : ", a_inf
print " T_inf : ", T_inf
print " rho_inf : ", rho_inf
print " p_inf : ", p_inf
print " C_v : ", cv_value
print " gamma : ", gamma_value
# create solution for thermodynamic state and flow field
rho = rho_inf * (2. + sin(x - t))
u = a_inf * M * 0.5 * (2. + cos(x - t))
p = alpha_value * p_inf * (2. + cos(x - t))
e = p / (rho * (gamma_value - 1.))
E = 0.5 * rho * u * u + rho * e
# create solution for radiation field based on solution for F
# that is the leading order diffusion limit solution
T = e / cv_value
Er = a * T**4
Fr = -1. / (3. * sig_t) * c * diff(Er,
x) + sympify('4./3.') * Er * u
#Form psi+ and psi- from Fr and Er
psip = (Er * c * mu + Fr) / (2. * mu)
psim = (Er * c * mu - Fr) / (2. * mu)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
substitutions['c'] = GC.SPD_OF_LGT
substitutions['a'] = GC.RAD_CONSTANT
substitutions['mu'] = RU.mu["+"]
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho * u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
T = T.subs(substitutions)
rho_f = lambdify((symbols('x'), symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'), symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'), symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'), symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'), symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'), symbols('t')), psip, "numpy")
T_f = lambdify((symbols('x'), symbols('t')), T, "numpy")
Er = Er.subs(substitutions)
Er = lambdify((symbols('x'), symbols('t')), Er, "numpy")
#For reference create lambda as ratio of aT^4/rho--u^2 to check
#P_f = lambda x,t: GC.RAD_CONSTANT*T_f(x,t)**4/(rho_f(x,t)*u_f(x,t)**2)
#dx = 1./100.
#x = -1.*dx
#t=0.2
#for i in range(100):
# x += dx
# print "ratio:", P_f(x,t)
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho=rho,
u=u,
E=E,
psim=psim,
psip=psip,
sigma_s_value=sig_s,
sigma_a_value=sig_a,
gamma_value=gamma_value,
cv_value=cv_value,
alpha_value=alpha_value,
display_equations=True)
# mesh
width = 2. * pi
mesh = Mesh(n_elems, width)
# compute hydro IC for the sake of computing initial time step size
hydro_IC = computeAnalyticHydroSolution(mesh,
t=0.0,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# compute the initial time step size according to CFL conditon (actually
# half). We will then decrease this time step by the same factor as DX each
# cycle
if cycle == 0:
sound_speed = [
sqrt(i.p * i.gamma / i.rho) + abs(i.u) for i in hydro_IC
]
dt_vals = [
cfl_value * (mesh.elements[i].dx) / sound_speed[i]
for i in xrange(len(hydro_IC))
]
dt_value = min(min(dt_vals),
0.5) #don't take too big of time step
print "initial dt_value", dt_value
#Adjust the end time to be an exact increment of dt_values
print "old t_end: ", t_end
print "new t_end: ", t_end
print "This cycle's dt value: ", dt_value
# create uniform mesh
mesh = Mesh(n_elems, width)
dt.append(dt_value)
dx.append(mesh.getElement(0).dx)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# create rad BC object
rad_BC = RadBC(mesh, 'periodic')
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,
t=0.0,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# Dimensionless parameters. These are all evaluated at peaks of trig
# functions, very hard coded
print "---------------------------------------------"
print " Diffusion limit info:"
print "---------------------------------------------"
print "Size in mfp of cell", mesh.getElement(0).dx * sig_t
print "Ratio of radiation energy to kinetic", Er(0.75, 0) / (rho_f(
0.25, 0) * u_f(0.0, 0)**2), GC.RAD_CONSTANT * T_inf**4 / (
rho_inf * a_inf**2)
print "Ratio of speed of light to material sound speed", GC.SPD_OF_LGT / u_f(
0.0, 0), GC.SPD_OF_LGT / (a_inf)
print "---------------------------------------------"
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s + sig_a),
ConstantCrossSection(sig_s, sig_s + sig_a))
for i in xrange(mesh.n_elems)]
# transient options
t_start = 0.0
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
#slope limiter
limiter = 'double-minmod'
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh=mesh,
problem_type='rad_hydro',
dt_option='constant',
dt_constant=dt_value,
slope_limiter=limiter,
time_stepper='BDF2',
use_2_cycles=True,
t_start=t_start,
t_end=t_end,
rad_BC=rad_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
hydro_BC=hydro_BC,
mom_src=mom_src,
E_src=E_src,
rho_src=rho_src,
psim_src=psim_src,
psip_src=psip_src,
verbosity=verbosity,
rho_f=rho_f,
u_f=u_f,
E_f=E_f,
gamma_value=gamma_value,
cv_value=cv_value,
check_balance=True)
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
rad_exact = computeAnalyticRadSolution(mesh,
t_end,
psim=psim_f,
psip=psip_f)
#Compute error
err.append(
computeHydroL2Error(hydro_new, hydro_exact, rad_new,
rad_exact))
n_elems *= 2
dt_value *= 0.5
# compute convergence rates
rates_dx = computeHydroConvergenceRates(dx, err)
rates_dt = computeHydroConvergenceRates(dt, err)
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(dx,
err,
rates=rates_dx,
dx_desc='dx',
err_desc='$L_2$')
printHydroConvergenceTable(dt,
err,
rates=rates_dt,
dx_desc='dt',
err_desc='$L_2$')
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# plot hydro solution
plotHydroSolutions(mesh,
hydro_new,
x_exact=mesh.getCellCenters(),
exact=hydro_exact)
#plot exact and our E_r
Er_exact_fn = 1. / GC.SPD_OF_LGT * (psim + psip)
Fr_exact_fn = (psip - psim) * RU.mu["+"]
Er_exact = []
Fr_exact = []
psip_exact = []
psim_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x': xi, 't': t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
Fr_exact.append(Fr_exact_fn.subs(substitutions))
psip_exact.append(psip_f(xi, t_end))
psim_exact.append(psim_f(xi, t_end))
plotRadErg(mesh,
rad_new.E,
Fr_edge=rad_new.F,
exact_Er=Er_exact,
exact_Fr=Fr_exact)
plotS2Erg(mesh,
rad_new.psim,
rad_new.psip,
exact_psim=psim_exact,
exact_psip=psip_exact)
plotTemperatures(mesh,
rad_new.E,
hydro_states=hydro_new,
print_values=True)
#Make a pickle to save the error tables
from sys import argv
pickname = "results/testRadHydroDiffMMS.pickle"
if len(argv) > 2:
if argv[1] == "-o":
pickname = argv[2].strip()
#Create dictionary of all the data
big_dic = {"dx": dx}
big_dic["dt"] = dt
big_dic["Errors"] = err
pickle.dump(big_dic, open(pickname, "w"))
def test_RadHydroMMS(self):
# declare symbolic variables
x, t, alpha, c = symbols('x t alpha c')
#Cycles for time convergence
n_cycles = 3
# numeric values
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 1.0
sig_a = 1.0
sig_t = sig_s + sig_a
# create solution for thermodynamic state and flow field
rho = 2. + sin(2 * pi * x - t)
u = 2. + cos(2 * pi * x - t)
p = 0.5 * (2. + cos(2 * pi * x - t))
e = p / (rho * (gamma_value - 1.))
E = 0.5 * rho * u * u + rho * e
rho = sympify('2') * sin(t / 4.) + 2.
u = sympify('3') * sin(t / 4.) + 3.
E = sympify('10') * sin(t / 4.) + 10.
# create solution for radiation field based on solution for F
# that is the leading order diffusion limit solution
a = GC.RAD_CONSTANT
c = GC.SPD_OF_LGT
mu = RU.mu["+"]
#Equilibrium diffusion solution
Er = (2. + cos(2 * pi * x - t))
Fr = (2. + cos(2 * pi * x - t)) * c
psip = (Er * c * mu + Fr) / (2. * mu)
psim = (Er * c * mu - Fr) / (2. * mu)
psip = sympify('10') * c + 1 * sin(t / 4.)
psim = sympify('10') * c + 1 * cos(t / 4.)
#Form psi+ and psi- from Fr and Er
#psip = sympify('5.')*c
#psim = sympify('5.')*c
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho=rho,
u=u,
E=E,
psim=psim,
psip=psip,
sigma_s_value=sig_s,
sigma_a_value=sig_a,
gamma_value=gamma_value,
cv_value=cv_value,
alpha_value=alpha_value,
display_equations=True)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
substitutions['c'] = GC.SPD_OF_LGT
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho * u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
rho_f = lambdify((symbols('x'), symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'), symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'), symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'), symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'), symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'), symbols('t')), psip, "numpy")
dt_value = 0.0001
dt = []
err = []
#Loop over cycles for time convergence
for cycle in range(n_cycles):
# create uniform mesh
n_elems = 50
width = 1.0
mesh = Mesh(n_elems, width)
#Store
dt.append(dt_value)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# create rad BC object
rad_BC = RadBC(mesh, 'periodic')
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,
t=0.0,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s + sig_a),
ConstantCrossSection(sig_s, sig_s + sig_a))
for i in xrange(mesh.n_elems)]
# transient options
t_start = 0.0
t_end = 0.001
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
#slope limiter
limiter = 'none'
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh=mesh,
problem_type='rad_hydro',
dt_option='constant',
dt_constant=dt_value,
slope_limiter=limiter,
use_2_cycles=True,
t_start=t_start,
t_end=t_end,
rad_BC=rad_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
hydro_BC=hydro_BC,
mom_src=mom_src,
E_src=E_src,
rho_src=rho_src,
psim_src=psim_src,
psip_src=psip_src,
verbosity=verbosity,
rho_f=rho_f,
u_f=u_f,
E_f=E_f,
gamma_value=gamma_value,
cv_value=cv_value,
check_balance=True)
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
#Compute error
err.append(computeHydroL2Error(hydro_new, hydro_exact))
dt_value /= 2.
# compute convergence rates
rates = computeHydroConvergenceRates(dt, err)
# plot
if __name__ == '__main__':
# plot radiation solution
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(dt,
err,
rates=rates,
dx_desc='dt',
err_desc='L2')
# plot hydro solution
plotHydroSolutions(mesh,
hydro_new,
x_exact=mesh.getCellCenters(),
exact=hydro_exact)
#plot exact and our E_r
Er_exact_fn = 1. / GC.SPD_OF_LGT * (psim + psip)
Fr_exact_fn = (psip - psim) * RU.mu["+"]
Er_exact = []
Fr_exact = []
psip_exact = []
psim_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x': xi, 't': t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
Fr_exact.append(Fr_exact_fn.subs(substitutions))
psip_exact.append(psip_f(xi, t_end))
psim_exact.append(psim_f(xi, t_end))
plotRadErg(mesh,
rad_new.E,
Fr_edge=rad_new.F,
exact_Er=Er_exact,
exact_Fr=Fr_exact)
plotRadErg(mesh,
rad_new.psim,
rad_new.psip,
exact_Er=psip_exact,
exact_Fr=psim_exact)
def test_RadHydroShock(self):
# test case
test_case = "marcho3" # mach1.2 mach2 mach50
# create uniform mesh
n_elems = 1000
width = 0.04
x_start = -0.02
mesh_center = x_start + 0.5*width
mesh = Mesh(n_elems, width, x_start=x_start)
# slope limiter
slope_limiter = "double-minmod"
# gamma constant
gam = 5.0/3.0
# material 1 and 2 properties: Table 6.1
sig_a1 = 390.71164263502122
sig_s1 = 853.14410158161809 -sig_a1
c_v1 = 0.12348
sig_a2 = sig_a1
sig_s2 = sig_s1
c_v2 = c_v1
if not (test_case == "mach2" or test_case == "marcho3"):
raise NotImplementedError("All but mach2 and marcho3 shock may have wrong input"\
"values. Need to check Jarrod Ewards thesis, starting with Table 6.1")
if test_case == "mach1.2": # Mach 1.2 problem: Table 6.2
# material 1 IC
rho1 = 1.0
E1 = 2.2226400000000000e-02
u1 = 1.4055888445772469e-01
e1 = E1/rho1 - 0.5*u1*u1
Erad_left = 1.372E-06
# material 2 IC
rho2 = 1.2973213452231311
E2 = 2.6753570531538713e-002
u2 = 1.0834546504247138e-001
e2 = E2/rho2 - 0.5*u2*u2
Erad_right = 2.7955320762182542e-06
# final time
t_end = 0.5
# temperature plot filename
test_filename = "radshock_mach1.2.pdf"
# temperature plot exact solution filename
exact_solution_filename = "mach1.2_exact_solution.csv"
elif test_case == "mach2": # Mach 2 problem: Table 6.3
# material 1 IC
rho1 = 1.0
E1 = 3.9788000000000004e-002
u1 = 2.3426480742954117e-001
e1 = E1/rho1 - 0.5*u1*u1
T1 = e1/c_v1
Erad_left = 1.372E-06
# material 2 IC
rho2 = 2.2860748989303659e+000
E2 = 7.0649692950433357e-002
u2 = 1.0247468599526272e-001
e2 = E2/rho2 - 0.5*u2*u2
T2 = e2/c_v2
Erad_right = 2.5560936967521927e-005
print "rho", rho1, rho2
print "vel", u1, u2
print "Temperature", T1, T2
print "momentum", rho1*u1, rho2*u2
print "E",E1, E2
print "E_r",Erad_left, Erad_right
print sig_a1, sig_s1
# final time
t_end = 1.0
# temperature plot output filename
test_filename = "radshock_mach2.pdf"
# temperature plot exact solution filename
exact_solution_filename = "marcho2_exact_solution.csv"
elif test_case == "mach50": # Mach 50 problem: Table 6.4
raise NotImplementedError("Mach 50 test requires negativity monitoring," \
+ "which is not yet implemented.")
# material 1 IC
rho1 = 1.0
E1 = 1.7162348000000001e+001
u1 = 5.8566201857385289e+000
e1 = E1/rho1 - 0.5*u1*u1
Erad_left = 1.372E-06
# material 2 IC
rho2 = 6.5189217901173153e+000
E2 = 9.5144308747326214e+000
u2 = 8.9840319830453630e-001
e2 = E2/rho2 - 0.5*u2*u2
Erad_right = 7.3372623010289956e+001
# final time
t_end = 1.5
# temperature plot filename
test_filename = "radshock_mach50.pdf"
# temperature plot exact solution filename
exact_solution_filename = "mach50_exact_solution.csv"
elif test_case == "marcho2":
# material 1 IC
rho1 = 1.0
u1 = 0.23426480742954117
T1 = 1.219999999999999973e-01
e1 = T1*c_v2
E1 = 0.5*rho1*u1*u1 + e1*rho1
Erad_left = 3.039477120074432e-06
# material 2 IC
rho2 = 2.286074898930029242
u2 = 0.10247468599526272
T2 = 2.534635394302977573e-01
e2 = T2*c_v2
E2 = 0.5*rho2*u2*u2 + e2*rho2
Erad_right = 5.662673693907908e-05
print "rho", rho1, rho2
print "vel", u1, u2
print "Temperature", T1, T2
print "momentum", rho1*u1, rho2*u2
print "E",E1, E2
print "E_r",Erad_left, Erad_right
# final time
t_end = 0.10
# temperature plot filename
test_filename = "radshock_mach50.pdf"
# temperature plot exact solution filename
exact_solution_filename = "marcho2_exact_solution.csv"
elif test_case == "marcho1.05":
# material 1 IC
rho1 = 1.0
u1 = 0.1228902
T1 = 0.1
e1 = T1*c_v2
E1 = 0.5*rho1*u1*u1 + e1*rho1
Erad_left = 1.372E-06
# material 2 IC
rho2 = 1.0749588
u2 = rho1*u1/rho2
T2 = 0.1049454
e2 = T2*c_v2
E2 = 0.5*rho2*u2*u2 + e2*rho2
Erad_right = 1.664211799256650E-06
print "rho", rho1, rho2
print "vel", u1, u2
print "Temperature", T1, T2
print "momentum", rho1*u1, rho2*u2
print "E",E1, E2
print "E_r",Erad_left, Erad_right
# final time
t_end = 1.0
# temperature plot filename
test_filename = "radshock_mach50.pdf"
# temperature plot exact solution filename
exact_solution_filename = "marcho1.05_exact_solution.csv"
exact_solution_filename = None
elif test_case == "marcho3":
#new c_v and pure absorber cross sections
c_v1 = 0.221804
c_v2 = c_v1
sig_a1 = 577.3502692
sig_s1 = 0.
sig_a2 = sig_a1
sig_s2 = sig_s1
# material 1 IC
rho1 = 1.0
mom1 = 0.5192549757
u1 = mom1/rho1
T1 = 0.1215601363
e1 = T1*c_v1
E1 = 0.5*rho1*u1*u1 + e1*rho1
Erad_left = 2.995841442e-06
# material 2 IC
rho2 = 3.002167609
u2 = rho1*u1/rho2
T2 = 0.4451426103
e2 = T2*c_v2
E2 = 0.5*rho2*u2*u2 + e2*rho2
Erad_right = 0.0005387047241
print "rho", rho1, rho2
print "vel", u1, u2
print "Temperature", T1, T2
print "momentum", rho1*u1, rho2*u2
print "E",E1, E2
print "E_r",Erad_left, Erad_right
# final time
t_end = 1.0
# temperature plot filename
test_filename = "radshock_marcho3.pdf"
# temperature plot exact solution filename
exact_solution_filename = None
else:
raise NotImplementedError("Invalid test case")
# compute radiation BC; assumes BC is independent of time
c = GC.SPD_OF_LGT
psi_left = 0.5*c*Erad_left
psi_right = 0.5*c*Erad_right
#Create BC object
rad_BC = RadBC(mesh, "dirichlet", psi_left=psi_left, psi_right=psi_right)
# construct cross sections and hydro IC
cross_sects = list()
hydro_IC = list()
psi_IC = list()
for i in range(mesh.n_elems):
if mesh.getElement(i).x_cent < mesh_center: # material 1
cross_sects.append( (ConstantCrossSection(sig_s1, sig_s1+sig_a1),
ConstantCrossSection(sig_s1, sig_s1+sig_a1)) )
hydro_IC.append(
HydroState(u=u1,rho=rho1,e=e1,spec_heat=c_v1,gamma=gam))
psi_IC += [psi_left for dof in range(4)]
else: # material 2
cross_sects.append((ConstantCrossSection(sig_s2, sig_a2+sig_s2),
ConstantCrossSection(sig_s2, sig_a2+sig_s2)))
hydro_IC.append(
HydroState(u=u2,rho=rho2,e=e2,spec_heat=c_v2,gamma=gam))
psi_IC += [psi_right for dof in range(4)]
#Smooth out the middle solution optionally, shouldnt need this
n_smoothed = 0
state_l = hydro_IC[0]
state_r = hydro_IC[-1]
rho_l = state_l.rho
rho_r = state_r.rho
drho = rho_r - rho_l
u_l = state_l.u
u_r = state_r.u
du = u_r - u_l
e_l = state_l.e
e_r = state_r.e
de = e_r-e_l
print "p", state_l.p, state_r.p
print "mach number", state_l.u/state_l.getSoundSpeed(), state_r.u/state_r.getSoundSpeed()
#Scale
idx = 0
if n_smoothed > 0:
for i in range(mesh.n_elems/2-n_smoothed/2-1,mesh.n_elems/2+n_smoothed/2):
rho = rho_l + drho*idx/n_smoothed
u = rho_l*u_l/rho
e = e_l + de*idx/n_smoothed
idx+=1
E = 0.5*rho*u*u + rho*e
hydro_IC[i].updateState(rho, rho*u, E)
# plot hydro initial conditions
plotHydroSolutions(mesh, hydro_IC)
rad_IC = Radiation(psi_IC)
# create hydro BC
hydro_BC = HydroBC(bc_type='fixed', mesh=mesh, state_L = state_l,
state_R = state_r)
hydro_BC = HydroBC(mesh=mesh,bc_type='reflective')
# transient options
t_start = 0.0
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'CFL',
CFL = 0.6,
use_2_cycles = True,
t_start = t_start,
t_end = t_end,
rad_BC = rad_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
hydro_BC = hydro_BC,
verbosity = verbosity,
slope_limiter = slope_limiter,
check_balance=False)
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = None
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, exact=hydro_exact)
# plot material and radiation temperatures
plotTemperatures(mesh, rad_new.E, hydro_states=hydro_new, print_values=True,
save=True, filename=test_filename,
exact_solution_filename=exact_solution_filename)
# plot angular fluxes
plotS2Erg(mesh, rad_new.psim, rad_new.psip)
def test_RadHydroMMS(self):
# declare symbolic variables
x, t, A, B, C, c, cv, gamma, mu, alpha = \
symbols('x t A B C c cv gamma mu alpha')
#These constants, as well as cross sections and C_v, rho_ref
#will set the material
#and radiation to be small relative to kinetic energy
Ctilde = 100.
P = 0.1
#Arbitrary mach number well below the sound speed. The choice of gamma and
#the cv value, as well as C and P constrain all other material reference
#parameters, but we are free to choose the material velocity below the sound
#speed to ensure no shocks are formed
M = 0.9
cfl_value = 0.6 #but 2 time steps, so really like a CFL of 0.3
width = 2.0 * math.pi
# numeric values
gamma_value = 5. / 3.
cv_value = 0.14472799784454
# number of refinement cycles
n_cycles = 5
# number of elements in first cycle
n_elems = 40
# transient options
t_start = 0.0
t_end = 2.0 * math.pi / Ctilde
# numeric values
A_value = 1.0
B_value = 1.0
C_value = 1.0
alpha_value = 0.5
gamma_value = 5.0 / 3.0
sig_s_value = 0.0
sig_a_value = 1.0
# numeric values
a_inf = GC.SPD_OF_LGT / Ctilde
#T_inf = a_inf**2/(gamma_value*(gamma_value - 1.)*cv_value)
#rho_inf = GC.RAD_CONSTANT*T_inf**4/(P*a_inf**2)
rho_inf = 1.0
T_inf = pow(rho_inf * P * a_inf**2 / GC.RAD_CONSTANT,
0.25) #to set T_inf based on rho_inf,
cv_value = a_inf**2 / (T_inf * gamma_value * (gamma_value - 1.)
) # to set c_v, if rho specified
p_inf = rho_inf * a_inf * a_inf
Er_inf = GC.RAD_CONSTANT * T_inf**4
# MMS solutions
rho = rho_inf * A * (sin(B * x - C * t) + 2.)
u = M * a_inf * 1. / (A * (sin(B * x - C * t) + 2.))
p = p_inf * A * alpha * (sin(B * x - C * t) + 2.)
Er = alpha * (sin(B * x - Ctilde * C * t) + 2.) * Er_inf
Fr = alpha * (sin(B * x - Ctilde * C * t) + 2.) * c * Er_inf
#Er = 0.5*(sin(2*pi*x - 10.*t) + 2.)/c
#Fr = 0.5*(sin(2*pi*x - 10.*t) + 2.)
e = p / (rho * (gamma_value - 1.))
E = 0.5 * rho * u * u + rho * e
print "The dimensionalization parameters are: "
print " a_inf : ", a_inf
print " T_inf : ", T_inf
print " rho_inf : ", rho_inf
print " p_inf : ", p_inf
# derived solutions
T = e / cv_value
E = rho * (u * u / 2 + e)
psip = (Er * c + Fr / mu) / 2
psim = (Er * c - Fr / mu) / 2
# create list of substitutions
substitutions = dict()
substitutions['A'] = A_value
substitutions['B'] = B_value
substitutions['C'] = C_value
substitutions['c'] = GC.SPD_OF_LGT
substitutions['cv'] = cv_value
substitutions['gamma'] = gamma_value
substitutions['mu'] = RU.mu["+"]
substitutions['alpha'] = alpha_value
# make substitutions
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho * u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho=rho,
u=u,
E=E,
psim=psim,
psip=psip,
sigma_s_value=sig_s_value,
sigma_a_value=sig_a_value,
gamma_value=gamma_value,
cv_value=cv_value,
alpha_value=alpha_value,
display_equations=True)
# create functions for exact solutions
rho_f = lambdify((symbols('x'), symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'), symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'), symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'), symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'), symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'), symbols('t')), psip, "numpy")
dt = []
dx = []
err = []
for cycle in range(n_cycles):
# create uniform mesh
mesh = Mesh(n_elems, width)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# create rad BC object
rad_BC = RadBC(mesh, 'periodic')
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,
t=0.0,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s_value,
sig_s_value + sig_a_value),
ConstantCrossSection(sig_s_value,
sig_s_value + sig_a_value))
for i in xrange(mesh.n_elems)]
# compute the initial time step size according to CFL conditon (actually
# half). We will then decrease this time step by the same factor as DX each
# cycle
if cycle == 0:
sound_speed = [
sqrt(i.p * i.gamma / i.rho) + abs(i.u) for i in hydro_IC
]
dt_vals = [
cfl_value * (mesh.elements[i].dx) / sound_speed[i]
for i in xrange(len(hydro_IC))
]
dt_value = min(dt_vals)
print "dt_value for hydro: ", dt_value
#Make sure not taking too large of step for radiation time scale
period = 2. * math.pi / Ctilde
dt_value = min(dt_value, period / 8.)
print "initial dt_value", dt_value
#Adjust the end time to be an exact increment of dt_values
print "t_end: ", t_end
print "This cycle's dt value: ", dt_value
dt.append(dt_value)
dx.append(mesh.getElement(0).dx)
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
#slope limiter
limiter = 'double-minmod'
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh=mesh,
problem_type='rad_hydro',
dt_option='constant',
dt_constant=dt_value,
slope_limiter=limiter,
time_stepper='BDF2',
use_2_cycles=True,
t_start=t_start,
t_end=t_end,
rad_BC=rad_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
hydro_BC=hydro_BC,
mom_src=mom_src,
E_src=E_src,
rho_src=rho_src,
psim_src=psim_src,
psip_src=psip_src,
verbosity=verbosity,
rho_f=rho_f,
u_f=u_f,
E_f=E_f,
gamma_value=gamma_value,
cv_value=cv_value,
check_balance=False)
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
rad_exact = computeAnalyticRadSolution(mesh,
t_end,
psim=psim_f,
psip=psip_f)
#Compute error
err.append(
computeHydroL2Error(hydro_new, hydro_exact, rad_new,
rad_exact))
n_elems *= 2
dt_value *= 0.5
# compute convergence rates
rates_dx = computeHydroConvergenceRates(dx, err)
rates_dt = computeHydroConvergenceRates(dt, err)
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(dx,
err,
rates=rates_dx,
dx_desc='dx',
err_desc='$L_2$')
printHydroConvergenceTable(dt,
err,
rates=rates_dt,
dx_desc='dt',
err_desc='$L_2$')
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# plot hydro solution
plotHydroSolutions(mesh,
hydro_new,
x_exact=mesh.getCellCenters(),
exact=hydro_exact)
#plot exact and our E_r
Er_exact_fn = 1. / GC.SPD_OF_LGT * (psim + psip)
Fr_exact_fn = (psip - psim) * RU.mu["+"]
Er_exact = []
Fr_exact = []
psip_exact = []
psim_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x': xi, 't': t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
Fr_exact.append(Fr_exact_fn.subs(substitutions))
psip_exact.append(psip_f(xi, t_end))
psim_exact.append(psim_f(xi, t_end))
plotRadErg(mesh,
rad_new.E,
Fr_edge=rad_new.F,
exact_Er=Er_exact,
exact_Fr=Fr_exact)
plotS2Erg(mesh,
rad_new.psim,
rad_new.psip,
exact_psim=psim_exact,
exact_psip=psip_exact)
plotTemperatures(mesh,
rad_new.E,
hydro_states=hydro_new,
print_values=True)
#Make a pickle to save the error tables
from sys import argv
pickname = "results/testRadHydroStreamingMMSC100.pickle"
if len(argv) > 2:
if argv[1] == "-o":
pickname = argv[2].strip()
#Create dictionary of all the data
big_dic = {"dx": dx}
big_dic["dt"] = dt
big_dic["Errors"] = err
pickle.dump(big_dic, open(pickname, "w"))
def test_RadHydroMMS(self):
# slope limiter: choices are:
# none step minmod double-minmod superbee minbee vanleer
slope_limiter = 'none'
# number of elements
n_elems = 50
# end time
t_end = 0.1
# choice of solutions for hydro
hydro_case = "linear" # constant linear exponential
# choice of solutions for radiation
rad_case = "zero" # zero constant sin
# declare symbolic variables
x, t, alpha, c = symbols('x t alpha c')
# create solution for thermodynamic state and flow field
if hydro_case == "constant":
rho = sympify('4.0')
u = sympify('1.2')
E = sympify('10.0')
elif hydro_case == "linear":
rho = 1 + x - t
u = sympify('1')
E = 5 + 5*(x - 0.5)**2
elif hydro_case == "exponential":
rho = exp(x+t)+5
u = exp(-x)*sin(t) - 1
E = 10*exp(x+t)
else:
raise NotImplementedError("Invalid hydro test case")
# create solution for radiation field
if rad_case == "zero":
psim = sympify('0')
psip = sympify('0')
elif rad_case == "constant":
psim = 50*c
psip = 50*c
elif rad_case == "sin":
rad_scale = 50*c
psim = rad_scale*2*t*sin(pi*(1-x))+10*c
psip = rad_scale*t*sin(pi*x)+10*c
else:
raise NotImplementedError("Invalid radiation test case")
# numeric values
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 1.0
sig_a = 1.0
#sig_a = 0.0
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho = rho,
u = u,
E = E,
psim = psim,
psip = psip,
sigma_s_value = sig_s,
sigma_a_value = sig_a,
gamma_value = gamma_value,
cv_value = cv_value,
alpha_value = alpha_value,
display_equations = False)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
substitutions['c'] = GC.SPD_OF_LGT
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho*u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
rho_f = lambdify((symbols('x'),symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'),symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'),symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'),symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'),symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'),symbols('t')), psip, "numpy")
# create uniform mesh
width = 1.0
mesh = Mesh(n_elems, width)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# compute radiation BC; assumes BC is independent of time
psi_left = psip_f(x=0.0, t=0.0)
psi_right = psim_f(x=width, t=0.0)
#Create Radiation BC object
rad_BC = RadBC(mesh, "dirichlet", psi_left=psi_left, psi_right=psi_right)
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,t=0.0,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='dirichlet', mesh=mesh, rho_BC=rho_f,
mom_BC=mom_f, erg_BC=E_f)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s+sig_a),
ConstantCrossSection(sig_s, sig_s+sig_a))
for i in xrange(mesh.n_elems)]
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'CFL',
#dt_option = 'constant',
CFL = 0.5,
#dt_constant = 0.002,
slope_limiter = slope_limiter,
time_stepper = 'BDF2',
use_2_cycles = True,
t_start = 0.0,
t_end = t_end,
rad_BC = rad_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
hydro_BC = hydro_BC,
mom_src = mom_src,
E_src = E_src,
rho_src = rho_src,
psim_src = psim_src,
psip_src = psip_src,
verbosity = verbosity,
check_balance = False)
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, x_exact=mesh.getCellCenters(),
exact=hydro_exact)
# compute exact radiation energy
Er_exact_fn = 1./GC.SPD_OF_LGT*(psim + psip)
Er_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x':xi, 't':t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
# plot radiation energy
plotRadErg(mesh, rad_new.E, exact_Er=Er_exact)
def test_HydroMMS(self):
# number of elements in first cycle
n_elems = 25
# number of refinement cycles
n_cycles = 4
# spatial and temporal domains
width = 1.0
t_start = 0.0
t_end = 0.02
# declare symbolic variables
x, t, alpha = symbols('x t alpha')
# physics parameters (floats, not sympy)
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 0.0
sig_a = 0.0
# create solution for thermodynamic state and flow field
# rho = sympify('4')
# u = sympify('1.3')
# E = sympify('10')
rho = 2. + sin(2*pi*x)
u = 2. + cos(2*pi*x)
p = 2. + cos(2*pi*x)
e = p/(rho*(gamma_value-1.))
E = 0.5*rho*u*u + rho*e
# create solution for radiation field
psim = sympify('0')
psip = sympify('0')
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsHydroOnly(
rho = rho,
u = u,
E = E,
gamma_value = gamma_value,
cv_value = cv_value,
alpha_value = alpha_value,
display_equations = True)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho*u
E = E.subs(substitutions)
rho_f = lambdify((symbols('x'),symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'),symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'),symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'),symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'),symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'),symbols('t')), psip, "numpy")
# compute radiation BC; assumes BC is independent of time
psi_left = psip_f(x=0.0, t=0.0)
psi_right = psim_f(x=width, t=0.0)
# initialize lists for mesh size and L1 error for each cycle
max_dx = list()
err = list()
# loop over refinement cycles
for cycle in xrange(n_cycles):
if __name__ == '__main__':
print("\nCycle %d of %d: n_elems = %d" % (cycle+1,n_cycles,n_elems))
# create uniform mesh
mesh = Mesh(n_elems, width)
# append max dx for this cycle to list
max_dx.append(mesh.max_dx)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh, t=0.0,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s+sig_a),
ConstantCrossSection(sig_s, sig_s+sig_a))
for i in xrange(mesh.n_elems)]
# slope limiter option
slope_limiter = "none"
# if run standalone, then be verbose
if __name__ == '__main__':
if n_cycles == 1:
verbosity = 2
else:
verbosity = 1
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'CFL',
CFL = 0.5,
slope_limiter = slope_limiter,
time_stepper = 'BDF2',
use_2_cycles = True,
t_start = t_start,
t_end = t_end,
psi_left = psi_left,
psi_right = psi_right,
hydro_BC = hydro_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
mom_src = mom_src,
E_src = E_src,
psim_src = psim_src,
psip_src = psip_src,
rho_src = rho_src,
verbosity = verbosity,
check_balance = True,
rho_f =rho_f,
u_f = u_f,
E_f = E_f,
gamma_value = gamma_value,
cv_value = cv_value )
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# compute error
err.append(computeHydroL2Error(hydro_new, hydro_exact))
# double number of elements for next cycle
n_elems *= 2
# compute convergence rates
rates = computeHydroConvergenceRates(max_dx,err)
# print convergence table and plot
if __name__ == '__main__':
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(max_dx,err,rates=rates,
dx_desc='dx',err_desc='L2')
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, x_exact=mesh.getCellCenters(),
exact=hydro_exact)
def test_HydroMMS(self):
# number of elements in first cycle
n_elems = 25
# number of refinement cycles
n_cycles = 4
# spatial and temporal domains
width = 1.0
t_start = 0.0
t_end = 0.02
# declare symbolic variables
x, t, alpha = symbols('x t alpha')
# physics parameters (floats, not sympy)
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 0.0
sig_a = 0.0
# create solution for thermodynamic state and flow field
# rho = sympify('4')
# u = sympify('1.3')
# E = sympify('10')
rho = 2. + sin(2 * pi * x)
u = 2. + cos(2 * pi * x)
p = 2. + cos(2 * pi * x)
e = p / (rho * (gamma_value - 1.))
E = 0.5 * rho * u * u + rho * e
# create solution for radiation field
psim = sympify('0')
psip = sympify('0')
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsHydroOnly(
rho=rho,
u=u,
E=E,
gamma_value=gamma_value,
cv_value=cv_value,
alpha_value=alpha_value,
display_equations=True)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho * u
E = E.subs(substitutions)
rho_f = lambdify((symbols('x'), symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'), symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'), symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'), symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'), symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'), symbols('t')), psip, "numpy")
# compute radiation BC; assumes BC is independent of time
psi_left = psip_f(x=0.0, t=0.0)
psi_right = psim_f(x=width, t=0.0)
# initialize lists for mesh size and L1 error for each cycle
max_dx = list()
err = list()
# loop over refinement cycles
for cycle in xrange(n_cycles):
if __name__ == '__main__':
print("\nCycle %d of %d: n_elems = %d" %
(cycle + 1, n_cycles, n_elems))
# create uniform mesh
mesh = Mesh(n_elems, width)
# append max dx for this cycle to list
max_dx.append(mesh.max_dx)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,
t=0.0,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s + sig_a),
ConstantCrossSection(sig_s, sig_s + sig_a))
for i in xrange(mesh.n_elems)]
# slope limiter option
slope_limiter = "none"
# if run standalone, then be verbose
if __name__ == '__main__':
if n_cycles == 1:
verbosity = 2
else:
verbosity = 1
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh=mesh,
problem_type='rad_hydro',
dt_option='CFL',
CFL=0.5,
slope_limiter=slope_limiter,
time_stepper='BDF2',
use_2_cycles=True,
t_start=t_start,
t_end=t_end,
psi_left=psi_left,
psi_right=psi_right,
hydro_BC=hydro_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
mom_src=mom_src,
E_src=E_src,
psim_src=psim_src,
psip_src=psip_src,
rho_src=rho_src,
verbosity=verbosity,
check_balance=True,
rho_f=rho_f,
u_f=u_f,
E_f=E_f,
gamma_value=gamma_value,
cv_value=cv_value)
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# compute error
err.append(computeHydroL2Error(hydro_new, hydro_exact))
# double number of elements for next cycle
n_elems *= 2
# compute convergence rates
rates = computeHydroConvergenceRates(max_dx, err)
# print convergence table and plot
if __name__ == '__main__':
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(max_dx,
err,
rates=rates,
dx_desc='dx',
err_desc='L2')
# plot hydro solution
plotHydroSolutions(mesh,
hydro_new,
x_exact=mesh.getCellCenters(),
exact=hydro_exact)
def test_Hydro(self):
# create mesh
n_elems = 100
width = 1.0
mesh = Mesh(n_elems,width)
x_diaphragm = 0.3
# time step size and transient start and end times
CFL = 0.5
t_start = 0.0
t_end = 0.2
# slope limiter
slope_limiter = "vanleer"
# constant properties
sig_s = 1.0 # arbitrary
sig_a = 0.0 # set to zero to ensure no emission
sig_t = sig_s + sig_a
c_v = 3.0 # arbitrary
gam = 1.4
# hydro IC values for left half of domain
rhoL = 1.0
uL = 0.75
pL = 1.0
# hydro IC values for right half of domain
rhoR = 0.125
uR = 0.0
pR = 0.1
# compute left and right internal energies
eL = pL/(rhoL*(gam - 1.0))
eR = pR/(rhoR*(gam - 1.0))
# construct cross sections and hydro IC
cross_sects = list()
hydro_IC = list()
for i in range(mesh.n_elems):
# cross section is constant
cross_sects.append( (ConstantCrossSection(sig_s, sig_t),
ConstantCrossSection(sig_s, sig_t)) )
# IC for left half of domain
if mesh.getElement(i).x_cent < x_diaphragm:
hydro_IC.append(
HydroState(u=uL,rho=rhoL,e=eL,gamma=gam,spec_heat=c_v) )
# IC for right half of domain
else:
hydro_IC.append(
HydroState(u=uR,rho=rhoR,e=eR,gamma=gam,spec_heat=c_v) )
# create hydro BC
hydro_BC = HydroBC(bc_type='reflective', mesh=mesh)
# initialize radiation to zero solution to give pure hydrodynamics
rad_IC = Radiation([0.0 for i in range(n_elems*4)])
psi_left = 0.0
psi_right = 0.0
rad_BC = RadBC(mesh, "dirichlet", psi_left=psi_left, psi_right=psi_right)
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
# run transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
time_stepper = 'BE',
problem_type = 'rad_hydro',
dt_option = 'CFL',
CFL = 0.5,
use_2_cycles = True,
t_start = t_start,
t_end = t_end,
rad_BC = rad_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
hydro_BC = hydro_BC,
slope_limiter = slope_limiter,
verbosity = verbosity,
check_balance= True)
# plot solutions if run standalone
if __name__ == "__main__":
# get exact solutions
#get the exact values
f = open('exact_testHydro.txt', 'r')
x_e = []
u_e = []
p_e = []
rho_e = []
e_e = []
for line in f:
if len(line.split())==1:
t = line.split()
else:
data = line.split()
x_e.append(float(data[0]))
u_e.append(float(data[1]))
p_e.append(float(data[2]))
rho_e.append(float(data[4]))
e_e.append(float(data[3]))
hydro_exact = []
for i in range(len(x_e)):
hydro_exact.append(HydroState(u=u_e[i],rho=rho_e[i],e=e_e[i],gamma=gam,spec_heat=c_v) )
plotHydroSolutions(mesh, hydro_new,x_exact=x_e,exact=hydro_exact)
def test_RadHydroMMS(self):
# declare symbolic variables
x, t, alpha, c = symbols('x t alpha c')
# numeric values
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 1.0
sig_a = 1.0
# create solution for thermodynamic state and flow field
# rho = sympify('4.0')
# u = sympify('1.0')
# E = sympify('10.0')
rho = 2. + sin(2 * pi * x + t)
u = 2. + cos(2 * pi * x - t)
p = 2. + cos(2 * pi * x + t)
e = p / (rho * (gamma_value - 1.))
E = 0.5 * rho * u * u + rho * e
# create solution for radiation field
rad_scale = 50 * c
psim = rad_scale * (2 * t * sin(pi * (1 - x)) + 2 + 0.1 * t)
psip = rad_scale * (t * sin(pi * x) + 2 + 0.1 * t)
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho=rho,
u=u,
E=E,
psim=psim,
psip=psip,
sigma_s_value=sig_s,
sigma_a_value=sig_a,
gamma_value=gamma_value,
cv_value=cv_value,
alpha_value=alpha_value,
display_equations=True)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
substitutions['c'] = GC.SPD_OF_LGT
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho * u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
rho_f = lambdify((symbols('x'), symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'), symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'), symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'), symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'), symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'), symbols('t')), psip, "numpy")
# create uniform mesh
n_elems = 50
width = 1.0
mesh = Mesh(n_elems, width)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# create rad BC object
rad_BC = RadBC(mesh, 'dirichlet', psip_BC=psip_f, psim_BC=psim_f)
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,
t=0.0,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s + sig_a),
ConstantCrossSection(sig_s, sig_s + sig_a))
for i in xrange(mesh.n_elems)]
# transient options
t_start = 0.0
# t_end = 0.005
t_end = 0.02
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
#slope limiter
limiter = 'none'
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh=mesh,
problem_type='rad_hydro',
dt_option='CFL',
CFL=0.5,
# dt_option = 'constant',
# dt_constant = 0.0002,
slope_limiter=limiter,
time_stepper='BDF2',
use_2_cycles=True,
t_start=t_start,
t_end=t_end,
rad_BC=rad_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
hydro_BC=hydro_BC,
mom_src=mom_src,
E_src=E_src,
rho_src=rho_src,
psim_src=psim_src,
psip_src=psip_src,
verbosity=verbosity,
rho_f=rho_f,
u_f=u_f,
E_f=E_f,
gamma_value=gamma_value,
cv_value=cv_value,
check_balance=True)
# plot
if __name__ == '__main__':
# plot radiation solution
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# plot hydro solution
plotHydroSolutions(mesh,
hydro_new,
x_exact=mesh.getCellCenters(),
exact=hydro_exact)
#plot exact and our E_r
Er_exact_fn = 1. / GC.SPD_OF_LGT * (psim + psip)
Er_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x': xi, 't': t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
plotRadErg(mesh, rad_new.E, exact_Er=Er_exact)
def test_RadHydroShock(self):
# test case
test_case = "marcho3" # mach1.2 mach2 mach50
# create uniform mesh
n_elems = 1000
width = 0.04
x_start = -0.02
mesh_center = x_start + 0.5 * width
mesh = Mesh(n_elems, width, x_start=x_start)
# slope limiter
slope_limiter = "double-minmod"
# gamma constant
gam = 5.0 / 3.0
# material 1 and 2 properties: Table 6.1
sig_a1 = 390.71164263502122
sig_s1 = 853.14410158161809 - sig_a1
c_v1 = 0.12348
sig_a2 = sig_a1
sig_s2 = sig_s1
c_v2 = c_v1
if not (test_case == "mach2" or test_case == "marcho3"):
raise NotImplementedError("All but mach2 and marcho3 shock may have wrong input"\
"values. Need to check Jarrod Ewards thesis, starting with Table 6.1")
if test_case == "mach1.2": # Mach 1.2 problem: Table 6.2
# material 1 IC
rho1 = 1.0
E1 = 2.2226400000000000e-02
u1 = 1.4055888445772469e-01
e1 = E1 / rho1 - 0.5 * u1 * u1
Erad_left = 1.372E-06
# material 2 IC
rho2 = 1.2973213452231311
E2 = 2.6753570531538713e-002
u2 = 1.0834546504247138e-001
e2 = E2 / rho2 - 0.5 * u2 * u2
Erad_right = 2.7955320762182542e-06
# final time
t_end = 0.5
# temperature plot filename
test_filename = "radshock_mach1.2.pdf"
# temperature plot exact solution filename
exact_solution_filename = "mach1.2_exact_solution.csv"
elif test_case == "mach2": # Mach 2 problem: Table 6.3
# material 1 IC
rho1 = 1.0
E1 = 3.9788000000000004e-002
u1 = 2.3426480742954117e-001
e1 = E1 / rho1 - 0.5 * u1 * u1
T1 = e1 / c_v1
Erad_left = 1.372E-06
# material 2 IC
rho2 = 2.2860748989303659e+000
E2 = 7.0649692950433357e-002
u2 = 1.0247468599526272e-001
e2 = E2 / rho2 - 0.5 * u2 * u2
T2 = e2 / c_v2
Erad_right = 2.5560936967521927e-005
print "rho", rho1, rho2
print "vel", u1, u2
print "Temperature", T1, T2
print "momentum", rho1 * u1, rho2 * u2
print "E", E1, E2
print "E_r", Erad_left, Erad_right
print sig_a1, sig_s1
# final time
t_end = 1.0
# temperature plot output filename
test_filename = "radshock_mach2.pdf"
# temperature plot exact solution filename
exact_solution_filename = "marcho2_exact_solution.csv"
elif test_case == "mach50": # Mach 50 problem: Table 6.4
raise NotImplementedError("Mach 50 test requires negativity monitoring," \
+ "which is not yet implemented.")
# material 1 IC
rho1 = 1.0
E1 = 1.7162348000000001e+001
u1 = 5.8566201857385289e+000
e1 = E1 / rho1 - 0.5 * u1 * u1
Erad_left = 1.372E-06
# material 2 IC
rho2 = 6.5189217901173153e+000
E2 = 9.5144308747326214e+000
u2 = 8.9840319830453630e-001
e2 = E2 / rho2 - 0.5 * u2 * u2
Erad_right = 7.3372623010289956e+001
# final time
t_end = 1.5
# temperature plot filename
test_filename = "radshock_mach50.pdf"
# temperature plot exact solution filename
exact_solution_filename = "mach50_exact_solution.csv"
elif test_case == "marcho2":
# material 1 IC
rho1 = 1.0
u1 = 0.23426480742954117
T1 = 1.219999999999999973e-01
e1 = T1 * c_v2
E1 = 0.5 * rho1 * u1 * u1 + e1 * rho1
Erad_left = 3.039477120074432e-06
# material 2 IC
rho2 = 2.286074898930029242
u2 = 0.10247468599526272
T2 = 2.534635394302977573e-01
e2 = T2 * c_v2
E2 = 0.5 * rho2 * u2 * u2 + e2 * rho2
Erad_right = 5.662673693907908e-05
print "rho", rho1, rho2
print "vel", u1, u2
print "Temperature", T1, T2
print "momentum", rho1 * u1, rho2 * u2
print "E", E1, E2
print "E_r", Erad_left, Erad_right
# final time
t_end = 0.10
# temperature plot filename
test_filename = "radshock_mach50.pdf"
# temperature plot exact solution filename
exact_solution_filename = "marcho2_exact_solution.csv"
elif test_case == "marcho1.05":
# material 1 IC
rho1 = 1.0
u1 = 0.1228902
T1 = 0.1
e1 = T1 * c_v2
E1 = 0.5 * rho1 * u1 * u1 + e1 * rho1
Erad_left = 1.372E-06
# material 2 IC
rho2 = 1.0749588
u2 = rho1 * u1 / rho2
T2 = 0.1049454
e2 = T2 * c_v2
E2 = 0.5 * rho2 * u2 * u2 + e2 * rho2
Erad_right = 1.664211799256650E-06
print "rho", rho1, rho2
print "vel", u1, u2
print "Temperature", T1, T2
print "momentum", rho1 * u1, rho2 * u2
print "E", E1, E2
print "E_r", Erad_left, Erad_right
# final time
t_end = 1.0
# temperature plot filename
test_filename = "radshock_mach50.pdf"
# temperature plot exact solution filename
exact_solution_filename = "marcho1.05_exact_solution.csv"
exact_solution_filename = None
elif test_case == "marcho3":
#new c_v and pure absorber cross sections
c_v1 = 0.221804
c_v2 = c_v1
sig_a1 = 577.3502692
sig_s1 = 0.
sig_a2 = sig_a1
sig_s2 = sig_s1
# material 1 IC
rho1 = 1.0
mom1 = 0.5192549757
u1 = mom1 / rho1
T1 = 0.1215601363
e1 = T1 * c_v1
E1 = 0.5 * rho1 * u1 * u1 + e1 * rho1
Erad_left = 2.995841442e-06
# material 2 IC
rho2 = 3.002167609
u2 = rho1 * u1 / rho2
T2 = 0.4451426103
e2 = T2 * c_v2
E2 = 0.5 * rho2 * u2 * u2 + e2 * rho2
Erad_right = 0.0005387047241
print "rho", rho1, rho2
print "vel", u1, u2
print "Temperature", T1, T2
print "momentum", rho1 * u1, rho2 * u2
print "E", E1, E2
print "E_r", Erad_left, Erad_right
# final time
t_end = 1.0
# temperature plot filename
test_filename = "radshock_marcho3.pdf"
# temperature plot exact solution filename
exact_solution_filename = None
else:
raise NotImplementedError("Invalid test case")
# compute radiation BC; assumes BC is independent of time
c = GC.SPD_OF_LGT
psi_left = 0.5 * c * Erad_left
psi_right = 0.5 * c * Erad_right
#Create BC object
rad_BC = RadBC(mesh,
"dirichlet",
psi_left=psi_left,
psi_right=psi_right)
# construct cross sections and hydro IC
cross_sects = list()
hydro_IC = list()
psi_IC = list()
for i in range(mesh.n_elems):
if mesh.getElement(i).x_cent < mesh_center: # material 1
cross_sects.append(
(ConstantCrossSection(sig_s1, sig_s1 + sig_a1),
ConstantCrossSection(sig_s1, sig_s1 + sig_a1)))
hydro_IC.append(
HydroState(u=u1, rho=rho1, e=e1, spec_heat=c_v1,
gamma=gam))
psi_IC += [psi_left for dof in range(4)]
else: # material 2
cross_sects.append(
(ConstantCrossSection(sig_s2, sig_a2 + sig_s2),
ConstantCrossSection(sig_s2, sig_a2 + sig_s2)))
hydro_IC.append(
HydroState(u=u2, rho=rho2, e=e2, spec_heat=c_v2,
gamma=gam))
psi_IC += [psi_right for dof in range(4)]
#Smooth out the middle solution optionally, shouldnt need this
n_smoothed = 0
state_l = hydro_IC[0]
state_r = hydro_IC[-1]
rho_l = state_l.rho
rho_r = state_r.rho
drho = rho_r - rho_l
u_l = state_l.u
u_r = state_r.u
du = u_r - u_l
e_l = state_l.e
e_r = state_r.e
de = e_r - e_l
print "p", state_l.p, state_r.p
print "mach number", state_l.u / state_l.getSoundSpeed(
), state_r.u / state_r.getSoundSpeed()
#Scale
idx = 0
if n_smoothed > 0:
for i in range(mesh.n_elems / 2 - n_smoothed / 2 - 1,
mesh.n_elems / 2 + n_smoothed / 2):
rho = rho_l + drho * idx / n_smoothed
u = rho_l * u_l / rho
e = e_l + de * idx / n_smoothed
idx += 1
E = 0.5 * rho * u * u + rho * e
hydro_IC[i].updateState(rho, rho * u, E)
# plot hydro initial conditions
plotHydroSolutions(mesh, hydro_IC)
rad_IC = Radiation(psi_IC)
# create hydro BC
hydro_BC = HydroBC(bc_type='fixed',
mesh=mesh,
state_L=state_l,
state_R=state_r)
hydro_BC = HydroBC(mesh=mesh, bc_type='reflective')
# transient options
t_start = 0.0
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(mesh=mesh,
problem_type='rad_hydro',
dt_option='CFL',
CFL=0.6,
use_2_cycles=True,
t_start=t_start,
t_end=t_end,
rad_BC=rad_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
hydro_BC=hydro_BC,
verbosity=verbosity,
slope_limiter=slope_limiter,
check_balance=False)
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = None
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, exact=hydro_exact)
# plot material and radiation temperatures
plotTemperatures(mesh,
rad_new.E,
hydro_states=hydro_new,
print_values=True,
save=True,
filename=test_filename,
exact_solution_filename=exact_solution_filename)
# plot angular fluxes
plotS2Erg(mesh, rad_new.psim, rad_new.psip)
def test_RadHydroMMS(self):
# slope limiter: choices are:
# none step minmod double-minmod superbee minbee vanleer
slope_limiter = 'none'
# number of elements
n_elems = 50
# end time
t_end = 0.1
# choice of solutions for hydro
hydro_case = "linear" # constant linear exponential
# choice of solutions for radiation
rad_case = "zero" # zero constant sin
# declare symbolic variables
x, t, alpha, c = symbols('x t alpha c')
# create solution for thermodynamic state and flow field
if hydro_case == "constant":
rho = sympify('4.0')
u = sympify('1.2')
E = sympify('10.0')
elif hydro_case == "linear":
rho = 1 + x - t
u = sympify('1')
E = 5 + 5 * (x - 0.5)**2
elif hydro_case == "exponential":
rho = exp(x + t) + 5
u = exp(-x) * sin(t) - 1
E = 10 * exp(x + t)
else:
raise NotImplementedError("Invalid hydro test case")
# create solution for radiation field
if rad_case == "zero":
psim = sympify('0')
psip = sympify('0')
elif rad_case == "constant":
psim = 50 * c
psip = 50 * c
elif rad_case == "sin":
rad_scale = 50 * c
psim = rad_scale * 2 * t * sin(pi * (1 - x)) + 10 * c
psip = rad_scale * t * sin(pi * x) + 10 * c
else:
raise NotImplementedError("Invalid radiation test case")
# numeric values
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 1.0
sig_a = 1.0
#sig_a = 0.0
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho=rho,
u=u,
E=E,
psim=psim,
psip=psip,
sigma_s_value=sig_s,
sigma_a_value=sig_a,
gamma_value=gamma_value,
cv_value=cv_value,
alpha_value=alpha_value,
display_equations=False)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
substitutions['c'] = GC.SPD_OF_LGT
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho * u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
rho_f = lambdify((symbols('x'), symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'), symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'), symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'), symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'), symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'), symbols('t')), psip, "numpy")
# create uniform mesh
width = 1.0
mesh = Mesh(n_elems, width)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# compute radiation BC; assumes BC is independent of time
psi_left = psip_f(x=0.0, t=0.0)
psi_right = psim_f(x=width, t=0.0)
#Create Radiation BC object
rad_BC = RadBC(mesh,
"dirichlet",
psi_left=psi_left,
psi_right=psi_right)
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,
t=0.0,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='dirichlet',
mesh=mesh,
rho_BC=rho_f,
mom_BC=mom_f,
erg_BC=E_f)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s + sig_a),
ConstantCrossSection(sig_s, sig_s + sig_a))
for i in xrange(mesh.n_elems)]
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh=mesh,
problem_type='rad_hydro',
dt_option='CFL',
#dt_option = 'constant',
CFL=0.5,
#dt_constant = 0.002,
slope_limiter=slope_limiter,
time_stepper='BDF2',
use_2_cycles=True,
t_start=0.0,
t_end=t_end,
rad_BC=rad_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
hydro_BC=hydro_BC,
mom_src=mom_src,
E_src=E_src,
rho_src=rho_src,
psim_src=psim_src,
psip_src=psip_src,
verbosity=verbosity,
check_balance=False)
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh,
t=t_end,
rho=rho_f,
u=u_f,
E=E_f,
cv=cv_value,
gamma=gamma_value)
# plot hydro solution
plotHydroSolutions(mesh,
hydro_new,
x_exact=mesh.getCellCenters(),
exact=hydro_exact)
# compute exact radiation energy
Er_exact_fn = 1. / GC.SPD_OF_LGT * (psim + psip)
Er_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x': xi, 't': t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
# plot radiation energy
plotRadErg(mesh, rad_new.E, exact_Er=Er_exact)
def test_RadHydroMMS(self):
# declare symbolic variables
x, t, alpha, c = symbols('x t alpha c')
#Cycles for time convergence
n_cycles = 3
# numeric values
alpha_value = 0.01
cv_value = 1.0
gamma_value = 1.4
sig_s = 1.0
sig_a = 1.0
sig_t = sig_s + sig_a
# create solution for thermodynamic state and flow field
rho = 2. + sin(2*pi*x-t)
u = 2. + cos(2*pi*x-t)
p = 0.5*(2. + cos(2*pi*x-t))
e = p/(rho*(gamma_value-1.))
E = 0.5*rho*u*u + rho*e
rho = sympify('2')*sin(t/4.)+2.
u = sympify('3')*sin(t/4.)+3.
E = sympify('10')*sin(t/4.)+10.
# create solution for radiation field based on solution for F
# that is the leading order diffusion limit solution
a = GC.RAD_CONSTANT
c = GC.SPD_OF_LGT
mu = RU.mu["+"]
#Equilibrium diffusion solution
Er = (2.+cos(2*pi*x-t))
Fr = (2.+cos(2*pi*x-t))*c
psip = (Er*c*mu + Fr)/(2.*mu)
psim = (Er*c*mu - Fr)/(2.*mu)
psip = sympify('10')*c+1*sin(t/4.)
psim = sympify('10')*c+1*cos(t/4.)
#Form psi+ and psi- from Fr and Er
#psip = sympify('5.')*c
#psim = sympify('5.')*c
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho = rho,
u = u,
E = E,
psim = psim,
psip = psip,
sigma_s_value = sig_s,
sigma_a_value = sig_a,
gamma_value = gamma_value,
cv_value = cv_value,
alpha_value = alpha_value,
display_equations = True)
# create functions for exact solutions
substitutions = dict()
substitutions['alpha'] = alpha_value
substitutions['c'] = GC.SPD_OF_LGT
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho*u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
rho_f = lambdify((symbols('x'),symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'),symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'),symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'),symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'),symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'),symbols('t')), psip, "numpy")
dt_value = 0.0001
dt = []
err = []
#Loop over cycles for time convergence
for cycle in range(n_cycles):
# create uniform mesh
n_elems = 50
width = 1.0
mesh = Mesh(n_elems, width)
#Store
dt.append(dt_value)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# create rad BC object
rad_BC = RadBC(mesh, 'periodic')
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,t=0.0,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s, sig_s+sig_a),
ConstantCrossSection(sig_s, sig_s+sig_a))
for i in xrange(mesh.n_elems)]
# transient options
t_start = 0.0
t_end = 0.001
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
#slope limiter
limiter = 'none'
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'constant',
dt_constant = dt_value,
slope_limiter = limiter,
use_2_cycles = True,
t_start = t_start,
t_end = t_end,
rad_BC = rad_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
hydro_BC = hydro_BC,
mom_src = mom_src,
E_src = E_src,
rho_src = rho_src,
psim_src = psim_src,
psip_src = psip_src,
verbosity = verbosity,
rho_f =rho_f,
u_f = u_f,
E_f = E_f,
gamma_value = gamma_value,
cv_value = cv_value,
check_balance = True)
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
#Compute error
err.append(computeHydroL2Error(hydro_new, hydro_exact))
dt_value /= 2.
# compute convergence rates
rates = computeHydroConvergenceRates(dt,err)
# plot
if __name__ == '__main__':
# plot radiation solution
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(dt,err,rates=rates,
dx_desc='dt',err_desc='L2')
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, x_exact=mesh.getCellCenters(),
exact=hydro_exact)
#plot exact and our E_r
Er_exact_fn = 1./GC.SPD_OF_LGT*(psim + psip)
Fr_exact_fn = (psip - psim)*RU.mu["+"]
Er_exact = []
Fr_exact = []
psip_exact = []
psim_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x':xi, 't':t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
Fr_exact.append(Fr_exact_fn.subs(substitutions))
psip_exact.append(psip_f(xi,t_end))
psim_exact.append(psim_f(xi,t_end))
plotRadErg(mesh, rad_new.E, Fr_edge=rad_new.F, exact_Er=Er_exact, exact_Fr =
Fr_exact)
plotRadErg(mesh, rad_new.psim, rad_new.psip, exact_Er=psip_exact,
exact_Fr=psim_exact)
def test_RadHydroMMS(self):
# declare symbolic variables
x, t, A, B, C, c, cv, gamma, mu, alpha = \
symbols('x t A B C c cv gamma mu alpha')
#These constants, as well as cross sections and C_v, rho_ref
#will set the material
#and radiation to be small relative to kinetic energy
Ctilde = 100.
P = 0.1
#Arbitrary mach number well below the sound speed. The choice of gamma and
#the cv value, as well as C and P constrain all other material reference
#parameters, but we are free to choose the material velocity below the sound
#speed to ensure no shocks are formed
M = 0.9
cfl_value = 0.6 #but 2 time steps, so really like a CFL of 0.3
width = 2.0*math.pi
# numeric values
gamma_value = 5./3.
cv_value = 0.14472799784454
# number of refinement cycles
n_cycles = 5
# number of elements in first cycle
n_elems = 40
# transient options
t_start = 0.0
t_end = 2.0*math.pi/Ctilde
# numeric values
A_value = 1.0
B_value = 1.0
C_value = 1.0
alpha_value = 0.5
gamma_value = 5.0/3.0
sig_s_value = 0.0
sig_a_value = 1.0
# numeric values
a_inf = GC.SPD_OF_LGT/Ctilde
#T_inf = a_inf**2/(gamma_value*(gamma_value - 1.)*cv_value)
#rho_inf = GC.RAD_CONSTANT*T_inf**4/(P*a_inf**2)
rho_inf = 1.0
T_inf = pow(rho_inf*P*a_inf**2/GC.RAD_CONSTANT,0.25) #to set T_inf based on rho_inf,
cv_value = a_inf**2/(T_inf*gamma_value*(gamma_value-1.)) # to set c_v, if rho specified
p_inf = rho_inf*a_inf*a_inf
Er_inf = GC.RAD_CONSTANT*T_inf**4
# MMS solutions
rho = rho_inf*A*(sin(B*x-C*t)+2.)
u = M*a_inf*1./(A*(sin(B*x-C*t)+2.))
p = p_inf*A*alpha*(sin(B*x-C*t)+2.)
Er = alpha*(sin(B*x-Ctilde*C*t)+2.)*Er_inf
Fr = alpha*(sin(B*x-Ctilde*C*t)+2.)*c*Er_inf
#Er = 0.5*(sin(2*pi*x - 10.*t) + 2.)/c
#Fr = 0.5*(sin(2*pi*x - 10.*t) + 2.)
e = p/(rho*(gamma_value-1.))
E = 0.5*rho*u*u + rho*e
print "The dimensionalization parameters are: "
print " a_inf : ", a_inf
print " T_inf : ", T_inf
print " rho_inf : ", rho_inf
print " p_inf : ", p_inf
# derived solutions
T = e/cv_value
E = rho*(u*u/2 + e)
psip = (Er*c + Fr/mu)/2
psim = (Er*c - Fr/mu)/2
# create list of substitutions
substitutions = dict()
substitutions['A'] = A_value
substitutions['B'] = B_value
substitutions['C'] = C_value
substitutions['c'] = GC.SPD_OF_LGT
substitutions['cv'] = cv_value
substitutions['gamma'] = gamma_value
substitutions['mu'] = RU.mu["+"]
substitutions['alpha'] = alpha_value
# make substitutions
rho = rho.subs(substitutions)
u = u.subs(substitutions)
mom = rho*u
E = E.subs(substitutions)
psim = psim.subs(substitutions)
psip = psip.subs(substitutions)
# create MMS source functions
rho_src, mom_src, E_src, psim_src, psip_src = createMMSSourceFunctionsRadHydro(
rho = rho,
u = u,
E = E,
psim = psim,
psip = psip,
sigma_s_value = sig_s_value,
sigma_a_value = sig_a_value,
gamma_value = gamma_value,
cv_value = cv_value,
alpha_value = alpha_value,
display_equations = True)
# create functions for exact solutions
rho_f = lambdify((symbols('x'),symbols('t')), rho, "numpy")
u_f = lambdify((symbols('x'),symbols('t')), u, "numpy")
mom_f = lambdify((symbols('x'),symbols('t')), mom, "numpy")
E_f = lambdify((symbols('x'),symbols('t')), E, "numpy")
psim_f = lambdify((symbols('x'),symbols('t')), psim, "numpy")
psip_f = lambdify((symbols('x'),symbols('t')), psip, "numpy")
dt = []
dx = []
err = []
for cycle in range(n_cycles):
# create uniform mesh
mesh = Mesh(n_elems, width)
# compute radiation IC
psi_IC = computeRadiationVector(psim_f, psip_f, mesh, t=0.0)
rad_IC = Radiation(psi_IC)
# create rad BC object
rad_BC = RadBC(mesh, 'periodic')
# compute hydro IC
hydro_IC = computeAnalyticHydroSolution(mesh,t=0.0,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# create hydro BC
hydro_BC = HydroBC(bc_type='periodic', mesh=mesh)
# create cross sections
cross_sects = [(ConstantCrossSection(sig_s_value, sig_s_value+sig_a_value),
ConstantCrossSection(sig_s_value, sig_s_value+sig_a_value))
for i in xrange(mesh.n_elems)]
# compute the initial time step size according to CFL conditon (actually
# half). We will then decrease this time step by the same factor as DX each
# cycle
if cycle == 0:
sound_speed = [sqrt(i.p * i.gamma / i.rho) + abs(i.u) for i in hydro_IC]
dt_vals = [cfl_value*(mesh.elements[i].dx)/sound_speed[i]
for i in xrange(len(hydro_IC))]
dt_value = min(dt_vals)
print "dt_value for hydro: ", dt_value
#Make sure not taking too large of step for radiation time scale
period = 2.*math.pi/Ctilde
dt_value = min(dt_value, period/8.)
print "initial dt_value", dt_value
#Adjust the end time to be an exact increment of dt_values
print "t_end: ", t_end
print "This cycle's dt value: ", dt_value
dt.append(dt_value)
dx.append(mesh.getElement(0).dx)
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
#slope limiter
limiter = 'double-minmod'
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'constant',
dt_constant = dt_value,
slope_limiter = limiter,
time_stepper = 'BDF2',
use_2_cycles = True,
t_start = t_start,
t_end = t_end,
rad_BC = rad_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
hydro_BC = hydro_BC,
mom_src = mom_src,
E_src = E_src,
rho_src = rho_src,
psim_src = psim_src,
psip_src = psip_src,
verbosity = verbosity,
rho_f = rho_f,
u_f = u_f,
E_f = E_f,
gamma_value = gamma_value,
cv_value = cv_value,
check_balance = False)
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
rad_exact = computeAnalyticRadSolution(mesh, t_end,psim=psim_f,psip=psip_f)
#Compute error
err.append(computeHydroL2Error(hydro_new, hydro_exact, rad_new, rad_exact ))
n_elems *= 2
dt_value *= 0.5
# compute convergence rates
rates_dx = computeHydroConvergenceRates(dx,err)
rates_dt = computeHydroConvergenceRates(dt,err)
# print convergence table
if n_cycles > 1:
printHydroConvergenceTable(dx,err,rates=rates_dx,
dx_desc='dx',err_desc='$L_2$')
printHydroConvergenceTable(dt,err,rates=rates_dt,
dx_desc='dt',err_desc='$L_2$')
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = computeAnalyticHydroSolution(mesh, t=t_end,
rho=rho_f, u=u_f, E=E_f, cv=cv_value, gamma=gamma_value)
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, x_exact=mesh.getCellCenters(),exact=hydro_exact)
#plot exact and our E_r
Er_exact_fn = 1./GC.SPD_OF_LGT*(psim + psip)
Fr_exact_fn = (psip - psim)*RU.mu["+"]
Er_exact = []
Fr_exact = []
psip_exact = []
psim_exact = []
x = mesh.getCellCenters()
for xi in x:
substitutions = {'x':xi, 't':t_end}
Er_exact.append(Er_exact_fn.subs(substitutions))
Fr_exact.append(Fr_exact_fn.subs(substitutions))
psip_exact.append(psip_f(xi,t_end))
psim_exact.append(psim_f(xi,t_end))
plotRadErg(mesh, rad_new.E, Fr_edge=rad_new.F, exact_Er=Er_exact, exact_Fr =
Fr_exact)
plotS2Erg(mesh, rad_new.psim, rad_new.psip, exact_psim=psim_exact,
exact_psip=psip_exact)
plotTemperatures(mesh, rad_new.E, hydro_states=hydro_new, print_values=True)
#Make a pickle to save the error tables
from sys import argv
pickname = "results/testRadHydroStreamingMMSC100.pickle"
if len(argv) > 2:
if argv[1] == "-o":
pickname = argv[2].strip()
#Create dictionary of all the data
big_dic = {"dx": dx}
big_dic["dt"] = dt
big_dic["Errors"] = err
pickle.dump( big_dic, open( pickname, "w") )
def test_RadHydroShock(self):
# create uniform mesh
n_elems = 500
width = 0.04
x_start = -0.02
mesh_center = x_start + 0.5 * width
mesh = Mesh(n_elems, width, x_start=x_start)
# slope limiter
slope_limiter = "double-minmod"
# gamma constant
gam = 5.0 / 3.0
# material 1 and 2 properties;
T_ref = 0.1 #keV reference unshocked, upstream, ambient, equilibrium
sig_a1 = 577.35
sig_s1 = 0.0
c_v1 = 0.14472799784454
sig_a2 = sig_a1
sig_s2 = sig_s1
c_v2 = c_v1
#Read in Jim's nondimensional results to set preshock and postshock dimensional
mach_number = "1.2" #Choices are 2.0, 1.2, 3.0, 5.0
filename = 'analytic_shock_solutions/data_for_M%s.pickle' % mach_number
f = open(filename, 'r')
data = pickle.load(f)
f.close()
#compute scalings based on an assumed density and reference temperature
dp = getDimensParams(T_ref=T_ref, rho_ref=1.0, C_v=c_v1, gamma=gam)
print data
#Scale non-dimensional values into dimensional results
rho1 = data['Density'][0] * dp['rho']
u1 = data['Speed'][0] * dp['a'] #velocity times reference sound speed
Erad1 = data['Er'][0] * dp['Er']
T1 = data['Tm'][0] * dp["Tm"]
e1 = T1 * c_v1
E1 = rho1 * (e1 + 0.5 * u1 * u1)
# material 2 IC
rho2 = data['Density'][-1] * dp['rho']
u2 = data['Speed'][-1] * dp['a'] #velocity times reference sound speed
Erad2 = data['Er'][-1] * dp['Er']
T2 = data['Tm'][-1] * T_ref
e2 = T2 * c_v2
E2 = rho2 * (e2 + 0.5 * u2 * u2)
print r"$\rho$ & %0.8e & %0.8e & g cm$^{-3}$ \\" % (rho1, rho2)
print r"$u$ & %0.8e & %0.8e & cm sh$^{-1}$ \\" % (u1, u2)
print r"$T$ & %0.8e & %0.8e & keV \\" % (T1, T2)
print r"$E$ & %0.8e & %0.8e & Jks cm$^{-3}$\\" % (E1, E2)
print r"$E_r$ & %0.8e & %0.8e & Jks cm$^{-3}$ \\" % (Erad1, Erad2)
print r"$F_r$ & %0.8e & %0.8e & Jks cm$^{-2}$ s$^{-1}$ \\" % (0.0, 0.0)
print r"vel", u1, "&", u2
print "Temperature", T1, "&", T2
print "momentum", rho1 * u1, "&", rho2 * u2
print "E", E1, "&", E2
print "E_r", Erad1, "&", Erad2
print sig_a1, sig_s1
exit()
# material 1 IC
# final time
t_end = 0.8
# temperature plot filename
test_filename = "radshock_mach_" + re.search(
"M(\d\.\d)", filename).group(1) + ".pdf"
# compute radiation BC; assumes BC is independent of time
c = GC.SPD_OF_LGT
psi_left = 0.5 * c * Erad1
psi_right = 0.5 * c * Erad2
#Create BC object
rad_BC = RadBC(mesh,
"dirichlet",
psi_left=psi_left,
psi_right=psi_right)
# construct cross sections and hydro IC
cross_sects = list()
hydro_IC = list()
psi_IC = list()
for i in range(mesh.n_elems):
if mesh.getElement(i).x_cent < mesh_center: # material 1
cross_sects.append(
(ConstantCrossSection(sig_s1, sig_s1 + sig_a1),
ConstantCrossSection(sig_s1, sig_s1 + sig_a1)))
hydro_IC.append(
HydroState(u=u1, rho=rho1, e=e1, spec_heat=c_v1,
gamma=gam))
psi_IC += [psi_left for dof in range(4)]
else: # material 2
cross_sects.append(
(ConstantCrossSection(sig_s2, sig_a2 + sig_s2),
ConstantCrossSection(sig_s2, sig_a2 + sig_s2)))
hydro_IC.append(
HydroState(u=u2, rho=rho2, e=e2, spec_heat=c_v2,
gamma=gam))
psi_IC += [psi_right for dof in range(4)]
#Convert pickle data to dimensional form
data['Density'] *= dp['rho']
data['Speed'] *= dp['a']
data['Er'] *= dp['Er']
data['Tm'] *= dp['Tm']
x_anal = data['x']
#If desired initialize the solutions to analytic result (ish)
analytic_IC = False
if analytic_IC:
hydro_IC = list()
psi_IC = list()
for i in range(mesh.n_elems):
#Determine which analytic x is closest to cell center
xcent = mesh.getElement(i).x_cent
min_dist = 9001.
idx = -1
for j in range(len(x_anal)):
if abs(xcent - x_anal[j]) < min_dist:
min_dist = abs(xcent - x_anal[j])
idx = j
#Create state based on these values, noting that the pickle has already
#been dimensionalized
rho1 = data['Density'][idx]
u1 = data['Speed'][idx] #velocity times reference sound speed
Erad1 = data['Er'][idx]
T1 = data['Tm'][idx]
e1 = T1 * c_v1
E1 = rho1 * (e1 + 0.5 * u1 * u1)
psi_left = 0.5 * c * Erad1
hydro_IC.append(
HydroState(u=u1, rho=rho1, e=e1, spec_heat=c_v1,
gamma=gam))
psi_IC += [psi_left for dof in range(4)]
#Smooth out the middle solution optionally, shouldnt need this
n_smoothed = 0
state_l = hydro_IC[0]
state_r = hydro_IC[-1]
rho_l = state_l.rho
rho_r = state_r.rho
drho = rho_r - rho_l
u_l = state_l.u
u_r = state_r.u
du = u_r - u_l
e_l = state_l.e
e_r = state_r.e
de = e_r - e_l
print "p", state_l.p, state_r.p
print "mach number", state_l.u / state_l.getSoundSpeed(
), state_r.u / state_r.getSoundSpeed()
#Scale
idx = 0
if n_smoothed > 0:
for i in range(mesh.n_elems / 2 - n_smoothed / 2 - 1,
mesh.n_elems / 2 + n_smoothed / 2):
rho = rho_l + drho * idx / n_smoothed
u = rho_l * u_l / rho
e = e_l + de * idx / n_smoothed
idx += 1
E = 0.5 * rho * u * u + rho * e
hydro_IC[i].updateState(rho, rho * u, E)
# plot hydro initial conditions
plotHydroSolutions(mesh, hydro_IC)
rad_IC = Radiation(psi_IC)
# create hydro BC
hydro_BC = HydroBC(bc_type='fixed',
mesh=mesh,
state_L=state_l,
state_R=state_r)
#Forcing to reflective? Maybe this is the problem
hydro_BC = HydroBC(mesh=mesh, bc_type='reflective')
# transient options
t_start = 0.0
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(mesh=mesh,
problem_type='rad_hydro',
dt_option='CFL',
CFL=0.6,
use_2_cycles=True,
t_start=t_start,
t_end=t_end,
rad_BC=rad_BC,
cross_sects=cross_sects,
rad_IC=rad_IC,
hydro_IC=hydro_IC,
hydro_BC=hydro_BC,
verbosity=verbosity,
slope_limiter=slope_limiter,
check_balance=False)
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = None
# plot hydro solution
plotHydroSolutions(mesh,
hydro_new,
exact=hydro_exact,
pickle_dic=data)
# plot material and radiation temperatures
Tr_exact, Tm_exact = plotTemperatures(mesh,
rad_new.E,
hydro_states=hydro_new,
print_values=True,
save=True,
filename=test_filename,
pickle_dic=data)
# plot angular fluxes
plotS2Erg(mesh, rad_new.psim, rad_new.psip)
#Make a pickle to save the error tables
pickname = "results/testJimsShock_M%s_%ielems.pickle" % (
mach_number, n_elems)
#Create dictionary of all the data
big_dic = {}
big_dic["hydro"] = hydro_new
big_dic["hydro_exact"] = hydro_exact
big_dic["rad"] = rad_new
big_dic["Tr_exact"] = Tr_exact
big_dic["Tm_exact"] = Tm_exact
pickle.dump(big_dic, open(pickname, "w"))
def test_RadHydroShock(self):
# create uniform mesh
n_elems = 500
width = 0.04
x_start = -0.02
mesh_center = x_start + 0.5*width
mesh = Mesh(n_elems, width, x_start=x_start)
# slope limiter
slope_limiter = "double-minmod"
# gamma constant
gam = 5.0/3.0
# material 1 and 2 properties;
T_ref = 0.1 #keV reference unshocked, upstream, ambient, equilibrium
sig_a1 = 577.35
sig_s1 = 0.0
c_v1 = 0.14472799784454
sig_a2 = sig_a1
sig_s2 = sig_s1
c_v2 = c_v1
#Read in Jim's nondimensional results to set preshock and postshock dimensional
mach_number = "1.2" #Choices are 2.0, 1.2, 3.0, 5.0
filename = 'analytic_shock_solutions/data_for_M%s.pickle' % mach_number
f = open(filename,'r')
data = pickle.load(f)
f.close()
#compute scalings based on an assumed density and reference temperature
dp =getDimensParams(T_ref=T_ref, rho_ref=1.0, C_v=c_v1, gamma=gam)
print data
#Scale non-dimensional values into dimensional results
rho1 = data['Density'][0]*dp['rho']
u1 = data['Speed'][0]*dp['a'] #velocity times reference sound speed
Erad1 = data['Er'][0]*dp['Er']
T1 = data['Tm'][0]*dp["Tm"]
e1 = T1*c_v1
E1 = rho1*(e1 + 0.5*u1*u1)
# material 2 IC
rho2 = data['Density'][-1]*dp['rho']
u2 = data['Speed'][-1]*dp['a'] #velocity times reference sound speed
Erad2 = data['Er'][-1]*dp['Er']
T2 = data['Tm'][-1]*T_ref
e2 = T2*c_v2
E2 = rho2*(e2 + 0.5*u2*u2)
print r"$\rho$ & %0.8e & %0.8e & g cm$^{-3}$ \\" % (rho1, rho2)
print r"$u$ & %0.8e & %0.8e & cm sh$^{-1}$ \\" % (u1, u2)
print r"$T$ & %0.8e & %0.8e & keV \\" % (T1,T2)
print r"$E$ & %0.8e & %0.8e & Jks cm$^{-3}$\\" % (E1,E2)
print r"$E_r$ & %0.8e & %0.8e & Jks cm$^{-3}$ \\" % (Erad1, Erad2)
print r"$F_r$ & %0.8e & %0.8e & Jks cm$^{-2}$ s$^{-1}$ \\" %(0.0,0.0)
print r"vel", u1, "&", u2
print "Temperature", T1,"&", T2
print "momentum", rho1*u1,"&", rho2*u2
print "E",E1,"&", E2
print "E_r",Erad1, "&", Erad2
print sig_a1, sig_s1
exit()
# material 1 IC
# final time
t_end = 0.8
# temperature plot filename
test_filename = "radshock_mach_"+re.search("M(\d\.\d)",filename).group(1)+".pdf"
# compute radiation BC; assumes BC is independent of time
c = GC.SPD_OF_LGT
psi_left = 0.5*c*Erad1
psi_right = 0.5*c*Erad2
#Create BC object
rad_BC = RadBC(mesh, "dirichlet", psi_left=psi_left, psi_right=psi_right)
# construct cross sections and hydro IC
cross_sects = list()
hydro_IC = list()
psi_IC = list()
for i in range(mesh.n_elems):
if mesh.getElement(i).x_cent < mesh_center: # material 1
cross_sects.append( (ConstantCrossSection(sig_s1, sig_s1+sig_a1),
ConstantCrossSection(sig_s1, sig_s1+sig_a1)) )
hydro_IC.append(
HydroState(u=u1,rho=rho1,e=e1,spec_heat=c_v1,gamma=gam))
psi_IC += [psi_left for dof in range(4)]
else: # material 2
cross_sects.append((ConstantCrossSection(sig_s2, sig_a2+sig_s2),
ConstantCrossSection(sig_s2, sig_a2+sig_s2)))
hydro_IC.append(
HydroState(u=u2,rho=rho2,e=e2,spec_heat=c_v2,gamma=gam))
psi_IC += [psi_right for dof in range(4)]
#Convert pickle data to dimensional form
data['Density'] *= dp['rho']
data['Speed'] *= dp['a']
data['Er'] *= dp['Er']
data['Tm'] *= dp['Tm']
x_anal = data['x']
#If desired initialize the solutions to analytic result (ish)
analytic_IC = False
if analytic_IC:
hydro_IC = list()
psi_IC = list()
for i in range(mesh.n_elems):
#Determine which analytic x is closest to cell center
xcent = mesh.getElement(i).x_cent
min_dist = 9001.
idx = -1
for j in range(len(x_anal)):
if abs(xcent - x_anal[j]) < min_dist:
min_dist = abs(xcent - x_anal[j])
idx = j
#Create state based on these values, noting that the pickle has already
#been dimensionalized
rho1 = data['Density'][idx]
u1 = data['Speed'][idx] #velocity times reference sound speed
Erad1 = data['Er'][idx]
T1 = data['Tm'][idx]
e1 = T1*c_v1
E1 = rho1*(e1 + 0.5*u1*u1)
psi_left = 0.5*c*Erad1
hydro_IC.append(
HydroState(u=u1,rho=rho1,e=e1,spec_heat=c_v1,gamma=gam))
psi_IC += [psi_left for dof in range(4)]
#Smooth out the middle solution optionally, shouldnt need this
n_smoothed = 0
state_l = hydro_IC[0]
state_r = hydro_IC[-1]
rho_l = state_l.rho
rho_r = state_r.rho
drho = rho_r - rho_l
u_l = state_l.u
u_r = state_r.u
du = u_r - u_l
e_l = state_l.e
e_r = state_r.e
de = e_r-e_l
print "p", state_l.p, state_r.p
print "mach number", state_l.u/state_l.getSoundSpeed(), state_r.u/state_r.getSoundSpeed()
#Scale
idx = 0
if n_smoothed > 0:
for i in range(mesh.n_elems/2-n_smoothed/2-1,mesh.n_elems/2+n_smoothed/2):
rho = rho_l + drho*idx/n_smoothed
u = rho_l*u_l/rho
e = e_l + de*idx/n_smoothed
idx+=1
E = 0.5*rho*u*u + rho*e
hydro_IC[i].updateState(rho, rho*u, E)
# plot hydro initial conditions
plotHydroSolutions(mesh, hydro_IC)
rad_IC = Radiation(psi_IC)
# create hydro BC
hydro_BC = HydroBC(bc_type='fixed', mesh=mesh, state_L = state_l,
state_R = state_r)
#Forcing to reflective? Maybe this is the problem
hydro_BC = HydroBC(mesh=mesh,bc_type='reflective')
# transient options
t_start = 0.0
# if run standalone, then be verbose
if __name__ == '__main__':
verbosity = 2
else:
verbosity = 0
# run the rad-hydro transient
rad_new, hydro_new = runNonlinearTransient(
mesh = mesh,
problem_type = 'rad_hydro',
dt_option = 'CFL',
CFL = 0.6,
use_2_cycles = True,
t_start = t_start,
t_end = t_end,
rad_BC = rad_BC,
cross_sects = cross_sects,
rad_IC = rad_IC,
hydro_IC = hydro_IC,
hydro_BC = hydro_BC,
verbosity = verbosity,
slope_limiter = slope_limiter,
check_balance=False)
# plot
if __name__ == '__main__':
# compute exact hydro solution
hydro_exact = None
# plot hydro solution
plotHydroSolutions(mesh, hydro_new, exact=hydro_exact, pickle_dic=data)
# plot material and radiation temperatures
Tr_exact, Tm_exact = plotTemperatures(mesh, rad_new.E, hydro_states=hydro_new, print_values=True,
save=True, filename=test_filename,
pickle_dic=data)
# plot angular fluxes
plotS2Erg(mesh, rad_new.psim, rad_new.psip)
#Make a pickle to save the error tables
pickname = "results/testJimsShock_M%s_%ielems.pickle" % (mach_number,n_elems)
#Create dictionary of all the data
big_dic = { }
big_dic["hydro"] = hydro_new
big_dic["hydro_exact"] = hydro_exact
big_dic["rad"] = rad_new
big_dic["Tr_exact"] = Tr_exact
big_dic["Tm_exact"] = Tm_exact
pickle.dump( big_dic, open( pickname, "w") )