def InitSpecCheck(self):
"""make an interactive grid in which users can edit specimen names
as well as which sample a specimen belongs to"""
self.panel = wx.Panel(self, style=wx.SIMPLE_BORDER)
#import wx.lib.scrolledpanel as libpanel # does not work well
#self.panel = libpanel.ScrolledPanel(self, style=wx.SIMPLE_BORDER)
text = """Step 1:
Check that all specimens belong to the correct sample
(if sample name is simply wrong, that will be fixed in step 2)"""
label = wx.StaticText(self.panel, label=text)
self.grid_builder = grid_frame.GridBuilder(self.er_magic_data, 'specimen',
self.er_magic_data.headers, self.panel,
'sample')
self.spec_grid = self.grid_builder.make_grid(incl_pmag=False)
self.grid = self.spec_grid
self.spec_grid.InitUI()
self.grid_builder.add_data_to_grid(self.spec_grid, 'specimen', incl_pmag=False)
samples = self.er_magic_data.make_name_list(self.er_magic_data.samples)
self.drop_down_menu = drop_down_menus.Menus("specimen", self, self.spec_grid, samples)
#### Create Buttons ####
hbox_one = wx.BoxSizer(wx.HORIZONTAL)
self.addSampleButton = wx.Button(self.panel, label="Add a new sample")
self.samples = [name for name in self.er_magic_data.samples]
self.Bind(wx.EVT_BUTTON, self.on_addSampleButton, self.addSampleButton)
self.helpButton = wx.Button(self.panel, label="Help")
self.Bind(wx.EVT_BUTTON, lambda event: self.on_helpButton(event, "ErMagicSpecimenHelp.html"), self.helpButton)
hbox_one.Add(self.addSampleButton, flag=wx.ALIGN_LEFT|wx.RIGHT, border=10)
hbox_one.Add(self.helpButton)
#
hboxok = wx.BoxSizer(wx.HORIZONTAL)
self.saveButton = wx.Button(self.panel, id=-1, label='Save')
self.Bind(wx.EVT_BUTTON, lambda event: self.on_saveButton(event, self.spec_grid), self.saveButton)
self.cancelButton = wx.Button(self.panel, wx.ID_CANCEL, '&Cancel')
self.Bind(wx.EVT_BUTTON, self.on_cancelButton, self.cancelButton)
self.continueButton = wx.Button(self.panel, id=-1, label='Save and continue')
self.Bind(wx.EVT_BUTTON, lambda event: self.on_continueButton(event, self.spec_grid, next_dia=self.InitSampCheck), self.continueButton)
hboxok.Add(self.saveButton, flag=wx.ALIGN_LEFT|wx.RIGHT, border=10)
hboxok.Add(self.cancelButton, flag=wx.ALIGN_LEFT|wx.RIGHT, border=10)
hboxok.Add(self.continueButton, flag=wx.ALIGN_LEFT)
#
hboxgrid = pw.hbox_grid(self.panel, self.onDeleteRow, 'specimen', self.grid)
self.deleteRowButton = hboxgrid.deleteRowButton
self.panel.Bind(wx.grid.EVT_GRID_LABEL_LEFT_CLICK, self.onLeftClickLabel, self.grid)
### Create Containers ###
vbox = wx.BoxSizer(wx.VERTICAL)
vbox.AddSpacer(10)
vbox.Add(label, flag=wx.ALIGN_CENTER|wx.TOP|wx.BOTTOM, border=10)
vbox.Add(hbox_one, flag=wx.TOP|wx.LEFT|wx.BOTTOM, border=10)
vbox.Add(hboxok, flag=wx.BOTTOM|wx.LEFT, border=10)
vbox.Add(hboxgrid, flag=wx.BOTTOM|wx.LEFT, border=10)
vbox.Add(self.spec_grid, flag=wx.ALL, border=10)#|wx.EXPAND, border=30)
vbox.AddSpacer(20)
hbox_all = wx.BoxSizer(wx.HORIZONTAL)
hbox_all.AddSpacer(20)
hbox_all.AddSpacer(vbox)
hbox_all.AddSpacer(20)
self.panel.SetSizer(hbox_all)
#self.panel.SetScrollbars(20, 20, 50, 50)
hbox_all.Fit(self)
self.Centre()
self.Show()
self.Hide()
self.Show()
def InitSiteCheck(self):
"""make an interactive grid in which users can edit site names
as well as which location a site belongs to"""
self.panel = wx.Panel(self, style=wx.SIMPLE_BORDER)
text = """Step 3:
Check that all sites are correctly named, and that they belong to the correct location.
Fill in the additional columns with controlled vocabularies.
The columns for class, lithology, and type can take multiple values in the form of a colon-delimited list.
You may use the drop-down menus to add as many values as needed in these columns.
(see the help button for more details)
note: Changes to site_class, site_lithology, or site_type will overwrite er_samples.txt
However, you will be able to edit sample_class, sample_lithology, and sample_type in step 4
**Denotes controlled vocabulary"""
label = wx.StaticText(self.panel, label=text)
#self.Data_hierarchy = self.ErMagic.Data_hierarchy
self.sites = sorted(self.er_magic_data.make_name_list(self.er_magic_data.sites))
#for val in ['er_citation_names', 'er_location_name', 'er_site_name', 'site_class', 'site_lithology', 'site_type', 'site_definition', 'site_lat', 'site_lon']: #
# try:
# self.er_magic_data.headers['site']['er'][0].remove(val)
# except ValueError:
# pass
self.grid_builder = grid_frame.GridBuilder(self.er_magic_data, 'site',
self.er_magic_data.headers, self.panel,
'location')
self.site_grid = self.grid_builder.make_grid(incl_pmag=False)
self.site_grid.InitUI()
self.grid_builder.add_data_to_grid(self.site_grid, 'site', incl_pmag=False)
self.grid = self.site_grid
# populate site_definition as 's' by default if no value is provided (indicates that site is single, not composite)
rows = self.site_grid.GetNumberRows()
col = 6
for row in range(rows):
cell = self.site_grid.GetCellValue(row, col)
if not cell:
self.site_grid.SetCellValue(row, col, 's')
# initialize all needed drop-down menus
locations = sorted(self.er_magic_data.make_name_list(self.er_magic_data.locations))
self.drop_down_menu = drop_down_menus.Menus("site", self, self.site_grid, locations)
### Create Buttons ###
hbox_one = wx.BoxSizer(wx.HORIZONTAL)
self.addLocButton = wx.Button(self.panel, label="Add a new location")
self.Bind(wx.EVT_BUTTON, self.on_addLocButton, self.addLocButton)
hbox_one.Add(self.addLocButton, flag=wx.RIGHT, border=10)
self.helpButton = wx.Button(self.panel, label="Help")
self.Bind(wx.EVT_BUTTON, lambda event: self.on_helpButton(event, "ErMagicSiteHelp.html"), self.helpButton)
hbox_one.Add(self.helpButton)
hboxok = wx.BoxSizer(wx.HORIZONTAL)
self.saveButton = wx.Button(self.panel, id=-1, label='Save')
self.Bind(wx.EVT_BUTTON, lambda event: self.on_saveButton(event, self.site_grid), self.saveButton)
self.cancelButton = wx.Button(self.panel, wx.ID_CANCEL, '&Cancel')
self.Bind(wx.EVT_BUTTON, self.on_cancelButton, self.cancelButton)
self.continueButton = wx.Button(self.panel, id=-1, label='Save and continue')
self.Bind(wx.EVT_BUTTON, lambda event: self.on_continueButton(event, self.site_grid, next_dia=self.InitSampCheck), self.continueButton)
self.backButton = wx.Button(self.panel, wx.ID_ANY, "&Back")
previous_dia = self.InitSampCheck
self.Bind(wx.EVT_BUTTON, lambda event: self.on_backButton(event, previous_dia=previous_dia), self.backButton)
hboxok.Add(self.saveButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.cancelButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.continueButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.backButton)
#
hboxgrid = pw.hbox_grid(self.panel, self.onDeleteRow, 'site', self.grid)
self.deleteRowButton = hboxgrid.deleteRowButton
self.Bind(wx.grid.EVT_GRID_LABEL_LEFT_CLICK, self.onLeftClickLabel, self.grid)
### Make Containers ###
vbox = wx.BoxSizer(wx.VERTICAL)
vbox.Add(label, flag=wx.ALIGN_CENTER|wx.BOTTOM|wx.TOP, border=20)
vbox.Add(hbox_one, flag=wx.BOTTOM|wx.LEFT, border=10)
vbox.Add(hboxok, flag=wx.BOTTOM|wx.LEFT, border=10)
vbox.Add(hboxgrid, flag=wx.BOTTOM|wx.LEFT, border=10)
vbox.Add(self.site_grid, flag=wx.ALL|wx.EXPAND, border=10) # EXPAND ??
vbox.AddSpacer(20)
hbox_all = wx.BoxSizer(wx.HORIZONTAL)
hbox_all.AddSpacer(20)
hbox_all.AddSpacer(vbox)
hbox_all.AddSpacer(20)
self.panel.SetSizer(hbox_all)
#if sys.platform in ['win32', 'win64']:
# self.panel.SetScrollbars(20, 20, 50, 50)
hbox_all.Fit(self)
self.Centre()
self.Show()
# this combination prevents a display error that (without the fix) only resolves on manually resizing the window
self.site_grid.ForceRefresh()
self.panel.Refresh()
self.Hide()
self.Show()
def InitLocCheck(self):
"""make an interactive grid in which users can edit specimen names
as well as which sample a specimen belongs to"""
self.panel = wx.Panel(self, style=wx.SIMPLE_BORDER)
text = """Step 5:
Check that locations are correctly named.
Fill in any blank cells using controlled vocabularies.
(See Help button for details)
** Denotes controlled vocabulary"""
label = wx.StaticText(self.panel, label=text)
#self.Data_hierarchy = self.ErMagic.Data_hierarchy
self.locations = self.er_magic_data.locations
#
if not self.er_magic_data.locations:
msg = "You have no data in er_locations, so we are skipping step 5.\n Note that location names must be entered at the measurements level,so you may need to re-import your data, or you can add a location in step 3"
dlg = wx.MessageDialog(None, caption="Message:", message=msg, style=wx.OK|wx.ICON_INFORMATION)
dlg.ShowModal()
dlg.Destroy()
self.panel.Destroy()
self.InitAgeCheck()
return
self.grid_builder = grid_frame.GridBuilder(self.er_magic_data, 'location',
self.er_magic_data.headers, self.panel)
self.loc_grid = self.grid_builder.make_grid(incl_pmag=False)
self.loc_grid.InitUI()
self.grid_builder.add_data_to_grid(self.loc_grid, 'location', incl_pmag=False)
self.grid = self.loc_grid
# initialize all needed drop-down menus
self.drop_down_menu = drop_down_menus.Menus("location", self, self.loc_grid, None)
# need to find max/min lat/lon here IF they were added in the previous grid
sites = self.er_magic_data.sites
location_lat_lon = self.er_magic_data.get_min_max_lat_lon(self.er_magic_data.locations)
col_names = ('location_begin_lat', 'location_end_lat', 'location_begin_lon', 'location_end_lon')
col_inds = [self.grid.col_labels.index(name) for name in col_names]
col_info = zip(col_names, col_inds)
for loc in self.er_magic_data.locations:
row_ind = self.grid.row_labels.index(loc.name)
for col_name, col_ind in col_info:
info = location_lat_lon[loc.name][col_name]
self.grid.SetCellValue(row_ind, col_ind, str(info))
### Create Buttons ###
hbox_one = wx.BoxSizer(wx.HORIZONTAL)
self.helpButton = wx.Button(self.panel, label="Help")
self.Bind(wx.EVT_BUTTON, lambda event: self.on_helpButton(event, "ErMagicLocationHelp.html"), self.helpButton)
hbox_one.Add(self.helpButton)
hboxok = wx.BoxSizer(wx.HORIZONTAL)
self.saveButton = wx.Button(self.panel, id=-1, label='Save')
self.Bind(wx.EVT_BUTTON, lambda event: self.on_saveButton(event, self.loc_grid), self.saveButton)
self.cancelButton = wx.Button(self.panel, wx.ID_CANCEL, '&Cancel')
self.Bind(wx.EVT_BUTTON, self.on_cancelButton, self.cancelButton)
self.continueButton = wx.Button(self.panel, id=-1, label='Save and continue')
self.Bind(wx.EVT_BUTTON, lambda event: self.on_continueButton(event, self.loc_grid, next_dia=self.InitAgeCheck), self.continueButton)
self.backButton = wx.Button(self.panel, wx.ID_ANY, "&Back")
previous_dia = self.InitSampCheck
self.Bind(wx.EVT_BUTTON, lambda event: self.on_backButton(event, previous_dia, current_dia=self.InitLocCheck), self.backButton)
hboxok.Add(self.saveButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.cancelButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.continueButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.backButton)
#
hboxgrid = pw.hbox_grid(self.panel, self.onDeleteRow, 'location', self.grid)
self.deleteRowButton = hboxgrid.deleteRowButton
self.Bind(wx.grid.EVT_GRID_LABEL_LEFT_CLICK, self.onLeftClickLabel, self.grid)
### Make Containers ###
vbox = wx.BoxSizer(wx.VERTICAL)
vbox.Add(label, flag=wx.ALIGN_CENTER|wx.TOP|wx.BOTTOM, border=20)
vbox.Add(hbox_one, flag=wx.BOTTOM|wx.ALIGN_LEFT, border=10)
vbox.Add(hboxok, flag=wx.BOTTOM|wx.ALIGN_LEFT, border=10)
vbox.Add(hboxgrid, flag=wx.BOTTOM|wx.ALIGN_LEFT, border=10)
vbox.Add(self.loc_grid, flag=wx.TOP|wx.BOTTOM, border=10)
vbox.AddSpacer(20)
hbox_all = wx.BoxSizer(wx.HORIZONTAL)
hbox_all.AddSpacer(20)
hbox_all.AddSpacer(vbox)
hbox_all.AddSpacer(20)
self.panel.SetSizer(hbox_all)
#if sys.platform in ['win32', 'win64']:
# self.panel.SetScrollbars(20, 20, 50, 50)
hbox_all.Fit(self)
self.Centre()
self.Show()
self.Hide()
self.Show()
def InitSampCheck(self):
"""make an interactive grid in which users can edit sample names
as well as which site a sample belongs to"""
self.sample_window += 1
self.panel = wx.Panel(self, style=wx.SIMPLE_BORDER)
if self.sample_window == 1:
text = """Step 2:
Check that all samples are correctly named,
and that they belong to the correct site
(if site name is simply wrong, that will be fixed in step 3)"""
step_label = wx.StaticText(self.panel, label=text)#, size=(900, 100))
else:
text = """Step 4:
Some of the data from the er_sites table has propogated into er_samples.
Check that these data are correct, and fill in missing cells using controlled vocabularies.
The columns for class, lithology, and type can take multiple values in the form of a colon-delimited list.
You may use the drop-down menus to add as many values as needed in these columns.
(see Help button for more details)\n\n** Denotes controlled vocabulary"""
step_label = wx.StaticText(self.panel, label=text)#, size=(900, 100))
if self.sample_window == 1:
# provide no extra headers
headers = {'sample': {'er': [[], [], []],
'pmag': [[], [], []]}}
self.grid_builder = grid_frame.GridBuilder(self.er_magic_data, 'sample',
headers, self.panel,
'site')
if self.sample_window > 1:
self.grid_builder = grid_frame.GridBuilder(self.er_magic_data, 'sample',
self.er_magic_data.headers, self.panel,
'site')
self.samp_grid = self.grid_builder.make_grid(incl_pmag=False)
self.samp_grid.InitUI()
self.grid_builder.add_data_to_grid(self.samp_grid, 'sample', incl_pmag=False)
self.grid = self.samp_grid
sites = sorted(self.er_magic_data.make_name_list(self.er_magic_data.sites))
self.drop_down_menu = drop_down_menus.Menus("sample", self, self.samp_grid, sites) # initialize all needed drop-down menus
### Create Buttons ###
hbox_one = wx.BoxSizer(wx.HORIZONTAL)
self.addSiteButton = wx.Button(self.panel, label="Add a new site")
self.Bind(wx.EVT_BUTTON, self.on_addSiteButton, self.addSiteButton)
hbox_one.Add(self.addSiteButton, flag=wx.RIGHT, border=10)
if self.sample_window == 1:
html_help = "ErMagicSampleHelp1.html"
if self.sample_window > 1:
html_help = "ErMagicSampleHelp.html"
self.helpButton = wx.Button(self.panel, label="Help")
self.Bind(wx.EVT_BUTTON, lambda event: self.on_helpButton(event, html_help), self.helpButton)
hbox_one.Add(self.helpButton)
hboxok = wx.BoxSizer(wx.HORIZONTAL)
self.saveButton = wx.Button(self.panel, id=-1, label='Save')
self.Bind(wx.EVT_BUTTON, lambda event: self.on_saveButton(event, self.samp_grid), self.saveButton)
self.cancelButton = wx.Button(self.panel, wx.ID_CANCEL, '&Cancel')
self.Bind(wx.EVT_BUTTON, self.on_cancelButton, self.cancelButton)
self.continueButton = wx.Button(self.panel, id=-1, label='Save and continue')
next_dia = self.InitSiteCheck if self.sample_window < 2 else self.InitLocCheck
self.Bind(wx.EVT_BUTTON, lambda event: self.on_continueButton(event, self.samp_grid, next_dia=next_dia), self.continueButton)
self.backButton = wx.Button(self.panel, wx.ID_ANY, "&Back")
previous_dia = self.InitSpecCheck if self.sample_window < 2 else self.InitSiteCheck
self.Bind(wx.EVT_BUTTON, lambda event: self.on_backButton(event, previous_dia=previous_dia), self.backButton)
hboxok.Add(self.saveButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.cancelButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.continueButton, flag=wx.RIGHT, border=10)
hboxok.Add(self.backButton)
hboxgrid = pw.hbox_grid(self.panel, self.onDeleteRow, 'sample', self.grid)
self.deleteRowButton = hboxgrid.deleteRowButton
self.Bind(wx.grid.EVT_GRID_LABEL_LEFT_CLICK, self.onLeftClickLabel, self.grid)
### Make Containers ###
vbox = wx.BoxSizer(wx.VERTICAL)
vbox.Add(step_label, flag=wx.ALIGN_LEFT|wx.TOP|wx.BOTTOM, border=20)
vbox.Add(hbox_one, flag=wx.BOTTOM|wx.LEFT, border=10)
vbox.Add(hboxok, flag=wx.BOTTOM|wx.LEFT, border=10)
vbox.Add(hboxgrid, flag=wx.BOTTOM|wx.LEFT, border=10)
vbox.Add(self.samp_grid, flag=wx.ALL, border=10) # using wx.EXPAND or not does not affect re-size problem
vbox.AddSpacer(20)
hbox_all = wx.BoxSizer(wx.HORIZONTAL)
hbox_all.AddSpacer(20)
hbox_all.AddSpacer(vbox)
hbox_all.AddSpacer(20)
self.panel.SetSizer(hbox_all)
#if sys.platform in ['win32', 'win64']:
# self.panel.SetScrollbars(20, 20, 50, 50)
hbox_all.Fit(self)
self.Centre()
self.Show()
## this combination may prevent a display error that (without the fix) only resolves on manually resizing the window
self.panel.Refresh()
self.samp_grid.ForceRefresh()
self.panel.Refresh()
self.Refresh()
# this prevents display errors
self.Hide()
self.Show()
