def test_cit_magic_with_file(self):
options = {}
options['input_dir_path'] = os.path.join(WD, 'data_files',
'Measurement_Import',
'CIT_magic', 'PI47')
options['magfile'] = 'PI47-.sam'
program_ran, outfile = cit_magic.main(False, **options)
self.assertTrue(program_ran)
expected_file = os.path.join('.', 'magic_measurements.txt')
self.assertEqual(outfile, expected_file)
def test_cit_magic_fail_option4(self):
options = {}
options['input_dir_path'] = os.path.join(WD, 'data_files',
'Measurement_Import',
'CIT_magic', 'PI47')
options['magfile'] = 'PI47-.sam'
options['samp_con'] = '4'
program_ran, error_message = cit_magic.main(False, **options)
self.assertFalse(program_ran)
self.assertEqual(error_message, "naming convention option [4] must be in form 4-Z where Z is an integer")
def test_cit_magic_with_file(self):
options = {}
options['input_dir_path'] = os.path.join(WD, 'data_files',
'Measurement_Import',
'CIT_magic', 'PI47')
options['magfile'] = 'PI47-.sam'
program_ran, outfile = cit_magic.main(False, **options)
self.assertTrue(program_ran)
expected_file = os.path.join('.', 'magic_measurements.txt')
self.assertEqual(outfile, expected_file)
def test_cit_magic_succeed_option4(self):
options = {}
options['input_dir_path'] = os.path.join(WD, 'data_files',
'convert_2_magic',
'cit_magic', 'PI47')
options['magfile'] = 'PI47-.sam'
options['samp_con'] = '4-3'
program_ran, outfile = cit_magic.main(False, **options)
self.assertTrue(program_ran)
expected_file = os.path.join('.', 'magic_measurements.txt')
self.assertEqual(outfile, expected_file)
def test_cit_magic_succeed_option4(self):
options = {}
options['input_dir_path'] = os.path.join(WD, 'data_files',
'convert_2_magic',
'cit_magic', 'PI47')
options['magfile'] = 'PI47-.sam'
options['samp_con'] = '4-3'
program_ran, outfile = cit_magic.main(False, **options)
self.assertTrue(program_ran)
expected_file = os.path.join('.', 'magic_measurements.txt')
self.assertEqual(outfile, expected_file)
def test_cit_magic_fail_option4(self):
options = {}
options['input_dir_path'] = os.path.join(WD, 'data_files',
'Measurement_Import',
'CIT_magic', 'PI47')
options['magfile'] = 'PI47-.sam'
options['samp_con'] = '4'
program_ran, error_message = cit_magic.main(False, **options)
self.assertFalse(program_ran)
self.assertEqual(
error_message,
"naming convention option [4] must be in form 4-Z where Z is an integer"
)
def test_cit_magic_with_other_data(self):
options = {}
options['input_dir_path'] = os.path.join(WD, 'data_files',
'Measurement_Import',
'CIT_magic', 'PI47')
options['magfile'] = 'PI47-.sam'
options['samp_con'] = '1'
options['methods'] = ['SO-SM:SO-MAG']
options['locname'] = 'location'
options['avg'] = 1
options['specnum'] = 2
program_ran, outfile = cit_magic.main(False, **options)
self.assertTrue(program_ran)
expected_file = os.path.join('.', 'magic_measurements.txt')
self.assertEqual(outfile, expected_file)
def test_cit_magic_with_other_data(self):
options = {}
options['input_dir_path'] = os.path.join(WD, 'data_files',
'Measurement_Import',
'CIT_magic', 'PI47')
options['magfile'] = 'PI47-.sam'
options['samp_con'] = '1'
options['methods'] = ['SO-SM:SO-MAG']
options['locname'] = 'location'
options['avg'] = 1
options['specnum'] = 2
program_ran, outfile = cit_magic.main(False, **options)
self.assertTrue(program_ran)
expected_file = os.path.join('.', 'magic_measurements.txt')
self.assertEqual(outfile, expected_file)
def test_cit_with_no_files(self):
program_ran, error_message = cit_magic.main(False)
self.assertFalse(program_ran)
self.assertEqual(error_message, 'bad sam file name')
def test_cit_with_no_files(self):
program_ran, error_message = cit_magic.main(False)
self.assertFalse(program_ran)
self.assertEqual(error_message, 'bad sam file name')
