def test_complete_compound_entry(self):
c = kegg.CompoundEntry({
'entry': ['C00001 Compound'],
'name': ['H2O;', 'Water'],
'reaction': ['R00001 R00002', 'R00003'],
'enzyme': ['1.2.3.4 2.3.4.5', '7.6.50.4 2.1.-,-'],
'formula': ['H2O'],
'exact_mass': ['18.01'],
'mol_weight': ['18.01'],
'pathway': ['map00001 First pathway', 'map00002 Second pathway'],
'dblinks': ['CAS: 12345', 'ChEBI: B2345'],
'comment': ['This information is purely for testing!']
})
self.assertEqual(c.id, 'C00001')
self.assertEqual(c.name, 'H2O')
self.assertEqual(list(c.names), ['H2O', 'Water'])
self.assertEqual(list(c.reactions), ['R00001', 'R00002', 'R00003'])
self.assertEqual(list(c.enzymes),
['1.2.3.4', '2.3.4.5', '7.6.50.4', '2.1.-,-'])
self.assertEqual(c.formula, 'H2O')
self.assertAlmostEqual(c.exact_mass, 18.01)
self.assertAlmostEqual(c.mol_weight, 18.01)
self.assertEqual(list(c.pathways), [('map00001', 'First pathway'),
('map00002', 'Second pathway')])
self.assertEqual(list(c.dblinks), [('CAS', '12345'),
('ChEBI', 'B2345')])
self.assertEqual(c.comment, 'This information is purely for testing!')
def test_minimal_compound_entry(self):
c = kegg.CompoundEntry(
kegg.KEGGEntry({'entry': ['C00001 Compound']}))
self.assertEqual(c.id, 'C00001')
self.assertIsNone(c.properties['name'])
self.assertIsNone(c.filemark)
def test_minimal_compound_entry(self):
c = kegg.CompoundEntry({'entry': ['C00001 Compound']})
self.assertEqual(c.id, 'C00001')
self.assertIsNone(c.name)
self.assertEqual(list(c.names), [])
self.assertIsNone(c.formula)
self.assertIsNone(c.exact_mass)
self.assertIsNone(c.mol_weight)
self.assertIsNone(c.comment)
self.assertIsNone(c.filemark)