Esempio n. 1
0
class FormatoptionWidget(QWidget, DockMixin):
    """
    Widget to update the formatoptions of the current project

    This widget, mainly made out of a combobox for the formatoption group,
    a combobox for the formatoption, and a text editor, is designed
    for updating the selected formatoptions for the current subproject.

    The widget is connected to the :attr:`psyplot.project.Project.oncpchange`
    signal and refills the comboboxes if the current subproject changes.

    The text editor either accepts python code that will be executed by the
    given `console`, or yaml code.
    """

    no_fmtos_update = _temp_bool_prop(
        'no_fmtos_update', """update the fmto combo box or not""")

    #: The combobox for the formatoption groups
    group_combo = None

    #: The combobox for the formatoptions
    fmt_combo = None

    #: The help_explorer to display the documentation of the formatoptions
    help_explorer = None

    #: The formatoption specific widget that is loaded from the formatoption
    fmt_widget = None

    #: A line edit for updating the formatoptions
    line_edit = None

    #: A multiline text editor for updating the formatoptions
    text_edit = None

    #: A button to switch between :attr:`line_edit` and :attr:`text_edit`
    multiline_button = None

    @property
    def shell(self):
        """The shell to execute the update of the formatoptions in the current
        project"""
        return self.console.kernel_manager.kernel.shell

    def __init__(self, *args, **kwargs):
        """
        Parameters
        ----------
        help_explorer: psyplot_gui.help_explorer.HelpExplorer
            The help explorer to show the documentation of one formatoption
        console: psyplot_gui.console.ConsoleWidget
            The console that can be used to update the current subproject via::

                psy.gcp().update(**kwargs)

            where ``**kwargs`` is defined through the selected formatoption
            in the :attr:`fmt_combo` combobox and the value in the
            :attr:`line_edit` editor
        ``*args, **kwargs``
            Any other keyword for the QWidget class
        """
        help_explorer = kwargs.pop('help_explorer', None)
        console = kwargs.pop('console', None)
        super(FormatoptionWidget, self).__init__(*args, **kwargs)
        self.help_explorer = help_explorer
        self.console = console
        self.error_msg = PyErrorMessage(self)

        # ---------------------------------------------------------------------
        # -------------------------- Child widgets ----------------------------
        # ---------------------------------------------------------------------
        self.group_combo = QComboBox(parent=self)
        self.fmt_combo = QComboBox(parent=self)
        self.line_edit = QLineEdit(parent=self)
        self.text_edit = QTextEdit(parent=self)
        self.run_button = QToolButton(parent=self)

        # completer for the fmto widget
        self.fmt_combo.setEditable(True)
        self.fmt_combo.setInsertPolicy(QComboBox.NoInsert)
        self.fmto_completer = completer = QCompleter(
            ['time', 'lat', 'lon', 'lev'])
        completer.setCompletionMode(
            QCompleter.PopupCompletion)
        completer.activated[str].connect(self.set_fmto)
        if with_qt5:
            completer.setFilterMode(Qt.MatchContains)
        completer.setModel(QStandardItemModel())
        self.fmt_combo.setCompleter(completer)

        self.dim_widget = DimensionsWidget(parent=self)
        self.dim_widget.setVisible(False)

        self.multiline_button = QPushButton('Multiline', parent=self)
        self.multiline_button.setCheckable(True)

        self.yaml_cb = QCheckBox('Yaml syntax')
        self.yaml_cb.setChecked(True)

        self.keys_button = QPushButton('Keys', parent=self)
        self.summaries_button = QPushButton('Summaries', parent=self)
        self.docs_button = QPushButton('Docs', parent=self)

        self.grouped_cb = QCheckBox('grouped', parent=self)
        self.all_groups_cb = QCheckBox('all groups', parent=self)
        self.include_links_cb = QCheckBox('include links', parent=self)

        self.text_edit.setVisible(False)

        # ---------------------------------------------------------------------
        # -------------------------- Descriptions -----------------------------
        # ---------------------------------------------------------------------

        self.group_combo.setToolTip('Select the formatoption group')
        self.fmt_combo.setToolTip('Select the formatoption to update')
        self.line_edit.setToolTip(
            'Insert the value which what you want to update the selected '
            'formatoption and hit right button. The code is executed in the '
            'main console.')
        self.yaml_cb.setToolTip(
            "Use the yaml syntax for the values inserted in the above cell. "
            "Otherwise the content there is evaluated as a python expression "
            "in the terminal")
        self.text_edit.setToolTip(self.line_edit.toolTip())
        self.run_button.setIcon(QIcon(get_icon('run_arrow.png')))
        self.run_button.setToolTip('Update the selected formatoption')
        self.multiline_button.setToolTip(
            'Allow linebreaks in the text editor line above.')
        self.keys_button.setToolTip(
            'Show the formatoption keys in this group (or in all '
            'groups) in the help explorer')
        self.summaries_button.setToolTip(
            'Show the formatoption summaries in this group (or in all '
            'groups) in the help explorer')
        self.docs_button.setToolTip(
            'Show the formatoption documentations in this group (or in all '
            'groups) in the help explorer')
        self.grouped_cb.setToolTip(
            'Group the formatoptions before displaying them in the help '
            'explorer')
        self.all_groups_cb.setToolTip('Use all groups when displaying the '
                                      'keys, docs or summaries')
        self.include_links_cb.setToolTip(
            'Include links to remote documentations when showing the '
            'keys, docs and summaries in the help explorer (requires '
            'intersphinx)')

        # ---------------------------------------------------------------------
        # -------------------------- Connections ------------------------------
        # ---------------------------------------------------------------------
        self.group_combo.currentIndexChanged[int].connect(self.fill_fmt_combo)
        self.fmt_combo.currentIndexChanged[int].connect(self.show_fmt_info)
        self.fmt_combo.currentIndexChanged[int].connect(self.load_fmt_widget)
        self.fmt_combo.currentIndexChanged[int].connect(
            self.set_current_fmt_value)
        self.run_button.clicked.connect(self.run_code)
        self.line_edit.returnPressed.connect(self.run_button.click)
        self.multiline_button.clicked.connect(self.toggle_line_edit)
        self.keys_button.clicked.connect(
            partial(self.show_all_fmt_info, 'keys'))
        self.summaries_button.clicked.connect(
            partial(self.show_all_fmt_info, 'summaries'))
        self.docs_button.clicked.connect(
            partial(self.show_all_fmt_info, 'docs'))

        # ---------------------------------------------------------------------
        # ------------------------------ Layouts ------------------------------
        # ---------------------------------------------------------------------
        self.combos = QHBoxLayout()
        self.combos.addWidget(self.group_combo)
        self.combos.addWidget(self.fmt_combo)

        self.execs = QHBoxLayout()
        self.execs.addWidget(self.line_edit)
        self.execs.addWidget(self.text_edit)
        self.execs.addWidget(self.run_button)

        self.info_box = QHBoxLayout()
        self.info_box.addWidget(self.multiline_button)
        self.info_box.addWidget(self.yaml_cb)
        self.info_box.addStretch(0)
        for w in [self.keys_button, self.summaries_button, self.docs_button,
                  self.all_groups_cb, self.grouped_cb, self.include_links_cb]:
            self.info_box.addWidget(w)

        self.vbox = QVBoxLayout()
        self.vbox.addLayout(self.combos)
        self.vbox.addWidget(self.dim_widget)
        self.vbox.addLayout(self.execs)
        self.vbox.addLayout(self.info_box)

        self.vbox.setSpacing(0)

        self.setLayout(self.vbox)

        # fill with content
        self.fill_combos_from_project(psy.gcp())
        psy.Project.oncpchange.connect(self.fill_combos_from_project)
        rcParams.connect('fmt.sort_by_key', self.refill_from_rc)

    def refill_from_rc(self, sort_by_key):
        from psyplot.project import gcp
        self.fill_combos_from_project(gcp())

    def fill_combos_from_project(self, project):
        """Fill :attr:`group_combo` and :attr:`fmt_combo` from a project

        Parameters
        ----------
        project: psyplot.project.Project
            The project to use"""
        if rcParams['fmt.sort_by_key']:
            def sorter(fmto):
                return fmto.key
        else:
            sorter = self.get_name

        current_text = self.group_combo.currentText()
        with self.no_fmtos_update:
            self.group_combo.clear()
            if project is None or project.is_main or not len(project):
                self.fmt_combo.clear()
                self.groups = []
                self.fmtos = []
                self.line_edit.setEnabled(False)
                return
            self.line_edit.setEnabled(True)
            # get dimensions
            it_vars = chain.from_iterable(
                arr.psy.iter_base_variables for arr in project.arrays)
            dims = next(it_vars).dims
            sdims = set(dims)
            for var in it_vars:
                sdims.intersection_update(var.dims)
            coords = [d for d in dims if d in sdims]
            coords_name = [COORDSGROUP] if coords else []
            coords_verbose = ['Dimensions'] if coords else []
            coords = [coords] if coords else []

            if len(project.plotters):
                # get formatoptions and group them alphabetically
                grouped_fmts = defaultdict(list)
                for fmto in project._fmtos:
                    grouped_fmts[fmto.group].append(fmto)
                for val in six.itervalues(grouped_fmts):
                    val.sort(key=sorter)
                grouped_fmts = OrderedDict(
                    sorted(six.iteritems(grouped_fmts),
                           key=lambda t: psyp.groups.get(t[0], t[0])))
                fmt_groups = list(grouped_fmts.keys())
                # save original names
                self.groups = coords_name + [ALLGROUP] + fmt_groups
                # save verbose group names (which are used in the combo box)
                self.groupnames = (
                    coords_verbose + ['All formatoptions'] + list(
                        map(lambda s: psyp.groups.get(s, s), fmt_groups)))
                # save formatoptions
                fmtos = list(grouped_fmts.values())
                self.fmtos = coords + [sorted(
                    chain(*fmtos), key=sorter)] + fmtos
            else:
                self.groups = coords_name
                self.groupnames = coords_verbose
                self.fmtos = coords
            self.group_combo.addItems(self.groupnames)
            ind = self.group_combo.findText(current_text)
            self.group_combo.setCurrentIndex(ind if ind >= 0 else 0)
        self.fill_fmt_combo(self.group_combo.currentIndex())

    def get_name(self, fmto):
        """Get the name of a :class:`psyplot.plotter.Formatoption` instance"""
        if isinstance(fmto, six.string_types):
            return fmto
        return '%s (%s)' % (fmto.name, fmto.key) if fmto.name else fmto.key

    @property
    def fmto(self):
        return self.fmtos[self.group_combo.currentIndex()][
            self.fmt_combo.currentIndex()]

    @fmto.setter
    def fmto(self, value):
        name = self.get_name(value)
        for i, fmtos in enumerate(self.fmtos):
            if i == 1:  # all formatoptions
                continue
            if name in map(self.get_name, fmtos):
                with self.no_fmtos_update:
                    self.group_combo.setCurrentIndex(i)
                self.fill_fmt_combo(i, name)
                return

    def toggle_line_edit(self):
        """Switch between the :attr:`line_edit` and :attr:`text_edit`

        This method is called when the :attr:`multiline_button` is clicked
        and switches between the single line :attr:``line_edit` and the
        multiline :attr:`text_edit`
        """
        # switch to multiline text edit
        if (self.multiline_button.isChecked() and
                not self.text_edit.isVisible()):
            self.line_edit.setVisible(False)
            self.text_edit.setVisible(True)
            self.text_edit.setPlainText(self.line_edit.text())
        elif (not self.multiline_button.isChecked() and
              not self.line_edit.isVisible()):
            self.line_edit.setVisible(True)
            self.text_edit.setVisible(False)
            self.line_edit.setText(self.text_edit.toPlainText())

    def fill_fmt_combo(self, i, current_text=None):
        """Fill the :attr:`fmt_combo` combobox based on the current group name
        """
        if not self.no_fmtos_update:
            with self.no_fmtos_update:
                if current_text is None:
                    current_text = self.fmt_combo.currentText()
                self.fmt_combo.clear()
                self.fmt_combo.addItems(
                    list(map(self.get_name, self.fmtos[i])))
                ind = self.fmt_combo.findText(current_text)
                self.fmt_combo.setCurrentIndex(ind if ind >= 0 else 0)
                # update completer model
                self.setup_fmt_completion_model()
            idx = self.fmt_combo.currentIndex()
            self.show_fmt_info(idx)
            self.load_fmt_widget(idx)
            self.set_current_fmt_value(idx)

    def set_fmto(self, name):
        self.fmto = name

    def setup_fmt_completion_model(self):
        fmtos = list(unique_everseen(map(
            self.get_name, chain.from_iterable(self.fmtos))))
        model = self.fmto_completer.model()
        model.setRowCount(len(fmtos))
        for i, name in enumerate(fmtos):
            model.setItem(i, QStandardItem(name))

    def load_fmt_widget(self, i):
        """Load the formatoption specific widget

        This method loads the formatoption specific widget from the
        :meth:`psyplot.plotter.Formatoption.get_fmt_widget` method and
        displays it above the :attr:`line_edit`

        Parameters
        ----------
        i: int
            The index of the current formatoption"""
        self.remove_fmt_widget()
        group_ind = self.group_combo.currentIndex()
        if not self.no_fmtos_update:
            from psyplot.project import gcp
            if self.groups[group_ind] == COORDSGROUP:
                dim = self.fmtos[group_ind][i]
                self.fmt_widget = self.dim_widget
                self.dim_widget.set_dim(dim)
                self.dim_widget.set_single_selection(
                    dim not in gcp()[0].dims)
                self.dim_widget.setVisible(True)
            else:
                fmto = self.fmtos[group_ind][i]
                self.fmt_widget = fmto.get_fmt_widget(self, gcp())
                if self.fmt_widget is not None:
                    self.vbox.insertWidget(2, self.fmt_widget)

    def reset_fmt_widget(self):
        idx = self.fmt_combo.currentIndex()
        self.load_fmt_widget(idx)
        self.set_current_fmt_value(idx)

    def remove_fmt_widget(self):
        if self.fmt_widget is not None:
            self.fmt_widget.hide()
            if self.fmt_widget is self.dim_widget:
                self.fmt_widget.reset_combobox()
            else:
                self.vbox.removeWidget(self.fmt_widget)
                self.fmt_widget.close()
            del self.fmt_widget

    def set_current_fmt_value(self, i):
        """Add the value of the current formatoption to the line text"""
        group_ind = self.group_combo.currentIndex()
        if not self.no_fmtos_update:
            if self.groups[group_ind] == COORDSGROUP:
                from psyplot.project import gcp
                dim = self.fmtos[group_ind][i]
                self.set_obj(gcp().arrays[0].psy.idims[dim])
            else:
                fmto = self.fmtos[group_ind][i]
                self.set_obj(fmto.value)

    def show_fmt_info(self, i):
        """Show the documentation of the formatoption in the help explorer
        """
        group_ind = self.group_combo.currentIndex()
        if (not self.no_fmtos_update and
                self.groups[group_ind] != COORDSGROUP):
            fmto = self.fmtos[self.group_combo.currentIndex()][i]
            fmto.plotter.show_docs(
                fmto.key, include_links=self.include_links_cb.isChecked())

    def run_code(self):
        """Run the update of the project inside the :attr:`shell`"""
        if self.line_edit.isVisible():
            text = str(self.line_edit.text())
        else:
            text = str(self.text_edit.toPlainText())
        if not text or not self.fmtos:
            return
        group_ind = self.group_combo.currentIndex()
        if self.groups[group_ind] == COORDSGROUP:
            key = self.fmtos[group_ind][self.fmt_combo.currentIndex()]
            param = 'dims'
        else:
            key = self.fmtos[group_ind][self.fmt_combo.currentIndex()].key
            param = 'fmt'
        if self.yaml_cb.isChecked():
            import psyplot.project as psy
            psy.gcp().update(**{key: yaml.load(text)})
        else:
            code = "psy.gcp().update(%s={'%s': %s})" % (param, key, text)
            if ExecutionInfo is not None:
                info = ExecutionInfo(raw_cell=code, store_history=False,
                                     silent=True, shell_futures=False)
                e = ExecutionResult(info)
            else:
                e = ExecutionResult()
            self.console.run_command_in_shell(code, e)
            try:
                e.raise_error()
            except Exception:  # reset the console and clear the error message
                raise
            finally:
                self.console.reset()

    def get_text(self):
        """Get the current update text"""
        if self.line_edit.isVisible():
            return self.line_edit.text()
        else:
            return self.text_edit.toPlainText()

    def get_obj(self):
        """Get the current update text"""
        if self.line_edit.isVisible():
            txt = self.line_edit.text()
        else:
            txt = self.text_edit.toPlainText()
        try:
            obj = yaml.load(txt)
        except Exception:
            self.error_msg.showTraceback("Could not load %s" % txt)
        else:
            return obj

    def insert_obj(self, obj):
        """Add a string to the formatoption widget"""
        current = self.get_text()
        use_yaml = self.yaml_cb.isChecked()
        use_line_edit = self.line_edit.isVisible()
        # strings are treated separately such that we consider quotation marks
        # at the borders
        if isstring(obj) and current:
            if use_line_edit:
                pos = self.line_edit.cursorPosition()
            else:
                pos = self.text_edit.textCursor().position()
            if pos not in [0, len(current)]:
                s = obj
            else:
                if current[0] in ['"', "'"]:
                    current = current[1:-1]
                self.clear_text()
                if pos == 0:
                    s = '"' + obj + current + '"'
                else:
                    s = '"' + current + obj + '"'
                current = ''
        elif isstring(obj):  # add quotation marks
            s = '"' + obj + '"'
        elif not use_yaml:
            s = repr(obj)
        else:
            s = yaml.dump(obj).strip()
            if s.endswith('\n...'):
                s = s[:-4]
        if use_line_edit:
            self.line_edit.insert(s)
        else:
            self.text_edit.insertPlainText(s)

    def clear_text(self):
        if self.line_edit.isVisible():
            self.line_edit.clear()
        else:
            self.text_edit.clear()

    def set_obj(self, obj):
        self.clear_text()
        self.insert_obj(obj)

    def show_all_fmt_info(self, what):
        """Show the keys, summaries or docs of the formatoptions

        Calling this function let's the help browser show the documentation
        etc. of all docs or only the selected group determined by the state of
        the :attr:`grouped_cb` and :attr:`all_groups_cb` checkboxes

        Parameters
        ----------
        what: {'keys', 'summaries', 'docs'}
            Determines what to show"""
        if not self.fmtos:
            return
        if (self.all_groups_cb.isChecked() or
                self.group_combo.currentIndex() < 2):
            fmtos = list(chain.from_iterable(
                fmto_group for i, fmto_group in enumerate(self.fmtos)
                if self.groups[i] not in [ALLGROUP, COORDSGROUP]))
        else:
            fmtos = self.fmtos[self.group_combo.currentIndex()]
        plotter = fmtos[0].plotter
        getattr(plotter, 'show_' + what)(
            [fmto.key for fmto in fmtos], grouped=self.grouped_cb.isChecked(),
            include_links=self.include_links_cb.isChecked())
Esempio n. 2
0
class PatternSelectionWidget(QWidget, DockMixin):
    """A wdiget to select patterns in the image

    This widget consist of an :class:`EmbededMplCanvas` to display the template
    for the pattern and uses the :func:`skimage.feature.match_template`
    function to identify it in the :attr:`arr`

    See Also
    --------
    straditize.widget.selection_toolbar.SelectionToolbar.start_pattern_selection
    """

    #: The template to look for in the :attr:`arr`
    template = None

    #: The selector to select the template in the original image
    selector = None

    #: The extents of the :attr:`template` in the original image
    template_extents = None

    #: The matplotlib artist of the :attr:`template` in the
    #: :attr:`template_fig`
    template_im = None

    #: The :class:`EmbededMplCanvas` to display the :attr:`template`
    template_fig = None

    axes = None

    #: A QSlider to set the threshold for the template correlation
    sl_thresh = None

    _corr_plot = None

    key_press_cid = None

    def __init__(self, arr, data_obj, remove_selection=False, *args, **kwargs):
        """
        Parameters
        ----------
        arr: np.ndarray of shape ``(Ny, Nx)``
            The labeled selection array
        data_obj: straditize.label_selection.LabelSelection
            The data object whose image shall be selected
        remove_selection: bool
            If True, remove the selection on apply
        """
        super(PatternSelectionWidget, self).__init__(*args, **kwargs)
        self.arr = arr
        self.data_obj = data_obj
        self.remove_selection = remove_selection
        self.template = None

        # the figure to show the template
        self.template_fig = EmbededMplCanvas()
        # the button to select the template
        self.btn_select_template = QPushButton('Select a template')
        self.btn_select_template.setCheckable(True)
        # the checkbox to allow fractions of the template
        self.fraction_box = QGroupBox('Template fractions')
        self.fraction_box.setCheckable(True)
        self.fraction_box.setChecked(False)
        self.fraction_box.setEnabled(False)
        self.sl_fraction = QSlider(Qt.Horizontal)
        self.lbl_fraction = QLabel('0.75')
        self.sl_fraction.setValue(75)
        # the slider to select the increments of the fractions
        self.sl_increments = QSlider(Qt.Horizontal)
        self.sl_increments.setValue(3)
        self.sl_increments.setMinimum(1)
        self.lbl_increments = QLabel('3')
        # the button to perform the correlation
        self.btn_correlate = QPushButton('Find template')
        self.btn_correlate.setEnabled(False)
        # the button to plot the correlation
        self.btn_plot_corr = QPushButton('Plot correlation')
        self.btn_plot_corr.setCheckable(True)
        self.btn_plot_corr.setEnabled(False)
        # slider for subselection
        self.btn_select = QPushButton('Select pattern')
        self.sl_thresh = QSlider(Qt.Horizontal)
        self.lbl_thresh = QLabel('0.5')

        self.btn_select.setCheckable(True)
        self.btn_select.setEnabled(False)
        self.sl_thresh.setValue(75)
        self.sl_thresh.setVisible(False)
        self.lbl_thresh.setVisible(False)

        # cancel and close button
        self.btn_cancel = QPushButton('Cancel')
        self.btn_close = QPushButton('Apply')
        self.btn_close.setEnabled(False)

        vbox = QVBoxLayout()

        vbox.addWidget(self.template_fig)
        hbox = QHBoxLayout()
        hbox.addStretch(0)
        hbox.addWidget(self.btn_select_template)
        vbox.addLayout(hbox)

        fraction_layout = QGridLayout()
        fraction_layout.addWidget(QLabel('Fraction'), 0, 0)
        fraction_layout.addWidget(self.sl_fraction, 0, 1)
        fraction_layout.addWidget(self.lbl_fraction, 0, 2)
        fraction_layout.addWidget(QLabel('Increments'), 1, 0)
        fraction_layout.addWidget(self.sl_increments, 1, 1)
        fraction_layout.addWidget(self.lbl_increments, 1, 2)

        self.fraction_box.setLayout(fraction_layout)

        vbox.addWidget(self.fraction_box)
        vbox.addWidget(self.btn_correlate)
        vbox.addWidget(self.btn_plot_corr)
        vbox.addWidget(self.btn_select)
        thresh_box = QHBoxLayout()
        thresh_box.addWidget(self.sl_thresh)
        thresh_box.addWidget(self.lbl_thresh)
        vbox.addLayout(thresh_box)

        hbox = QHBoxLayout()
        hbox.addWidget(self.btn_cancel)
        hbox.addWidget(self.btn_close)
        vbox.addLayout(hbox)
        self.setLayout(vbox)

        self.btn_select_template.clicked.connect(
            self.toggle_template_selection)
        self.sl_fraction.valueChanged.connect(
            lambda i: self.lbl_fraction.setText(str(i / 100.)))
        self.sl_increments.valueChanged.connect(
            lambda i: self.lbl_increments.setText(str(i)))
        self.btn_correlate.clicked.connect(self.start_correlation)
        self.btn_plot_corr.clicked.connect(self.toggle_correlation_plot)
        self.sl_thresh.valueChanged.connect(
            lambda i: self.lbl_thresh.setText(str((i - 50) / 50.)))
        self.sl_thresh.valueChanged.connect(self.modify_selection)
        self.btn_select.clicked.connect(self.toggle_selection)

        self.btn_cancel.clicked.connect(self.cancel)
        self.btn_close.clicked.connect(self.close)

    def toggle_template_selection(self):
        """Enable or disable the template selection"""
        if (not self.btn_select_template.isChecked()
                and self.selector is not None):
            self.selector.set_active(False)
            for a in self.selector.artists:
                a.set_visible(False)
            self.btn_select_template.setText('Select a template')
        elif self.selector is not None and self.template_im is not None:
            self.selector.set_active(True)
            for a in self.selector.artists:
                a.set_visible(True)
            self.btn_select_template.setText('Apply')
        else:
            self.selector = RectangleSelector(self.data_obj.ax,
                                              self.update_image,
                                              interactive=True)
            if self.template_extents is not None:
                self.selector.draw_shape(self.template_extents)
            self.key_press_cid = self.data_obj.ax.figure.canvas.mpl_connect(
                'key_press_event', self.update_image)
            self.btn_select_template.setText('Cancel')
        self.data_obj.draw_figure()
        if self.template is not None:
            self.fraction_box.setEnabled(True)
            self.sl_increments.setMaximum(min(self.template.shape[:2]))
            self.btn_correlate.setEnabled(True)

    def update_image(self, *args, **kwargs):
        """Update the template image based on the :attr:`selector` extents"""
        if self.template_im is not None:
            self.template_im.remove()
            del self.template_im
        elif self.axes is None:
            self.axes = self.template_fig.figure.add_subplot(111)
            self.template_fig.figure.subplots_adjust(bottom=0.3)
        if not self.selector.artists[0].get_visible():
            self.template_extents = None
            self.template = None
            self.btn_select_template.setText('Cancel')
        else:
            self.template_extents = np.round(self.selector.extents).astype(int)
            x, y = self.template_extents.reshape((2, 2))
            if getattr(self.data_obj, 'extent', None) is not None:
                extent = self.data_obj.extent
                x -= int(min(extent[:2]))
                y -= int(min(extent[2:]))
            slx = slice(*sorted(x))
            sly = slice(*sorted(y))
            self.template = template = self.arr[sly, slx]
            if template.ndim == 3:
                self.template_im = self.axes.imshow(template)
            else:
                self.template_im = self.axes.imshow(template, cmap='binary')
            self.btn_select_template.setText('Apply')
        self.template_fig.draw()

    def start_correlation(self):
        """Look for the correlations of template and source"""
        if self.fraction_box.isChecked():
            self._fraction = self.sl_fraction.value() / 100.
            increments = self.sl_increments.value()
        else:
            self._fraction = 0
            increments = 1
        corr = self.correlate_template(self.arr, self.template, self._fraction,
                                       increments)
        if corr is not None:
            self._correlation = corr
        enable = self._correlation is not None
        self.btn_plot_corr.setEnabled(enable)
        self.btn_select.setEnabled(enable)

    def toggle_selection(self):
        """Modifiy the selection (or not) based on the template correlation"""
        obj = self.data_obj
        if self.btn_select.isChecked():
            self._orig_selection_arr = obj._selection_arr.copy()
            self._selected_labels = obj.selected_labels
            self._select_cmap = obj._select_cmap
            self._select_norm = obj._select_norm
            self.btn_select.setText('Reset')
            self.btn_close.setEnabled(True)
            obj.unselect_all_labels()
            self.sl_thresh.setVisible(True)
            self.lbl_thresh.setVisible(True)
            self.modify_selection(self.sl_thresh.value())
        else:
            if obj._selection_arr is not None:
                obj._selection_arr[:] = self._orig_selection_arr
                obj._select_img.set_array(self._orig_selection_arr)
                obj.select_labels(self._selected_labels)
                obj._update_magni_img()
            del self._orig_selection_arr, self._selected_labels
            self.btn_select.setText('Select pattern')
            self.btn_close.setEnabled(False)
            self.sl_thresh.setVisible(False)
            self.lbl_thresh.setVisible(False)
            obj.draw_figure()

    def modify_selection(self, i):
        """Modify the selection based on the correlation threshold

        Parameters
        ----------
        i: int
            An integer between 0 and 100, the value of the :attr:`sl_thresh`
            slider"""
        if not self.btn_select.isChecked():
            return
        obj = self.data_obj
        val = (i - 50.) / 50.
        # select the values above 50
        if not self.remove_selection:
            # clear the selection
            obj._selection_arr[:] = obj._orig_selection_arr.copy()
            select_val = obj._selection_arr.max() + 1
            obj._selection_arr[self._correlation >= val] = select_val
        else:
            obj._selection_arr[:] = self._orig_selection_arr.copy()
            obj._selection_arr[self._correlation >= val] = -1
        obj._select_img.set_array(obj._selection_arr)
        obj._update_magni_img()
        obj.draw_figure()

    def correlate_template(self,
                           arr,
                           template,
                           fraction=False,
                           increment=1,
                           report=True):
        """Correlate a template with the `arr`

        This method uses the :func:`skimage.feature.match_template` function
        to find the given `template` in the source array `arr`.

        Parameters
        ----------
        arr: np.ndarray of shape ``(Ny,Nx)``
            The labeled selection array (see :attr:`arr`), the source of the
            given `template`
        template: np.ndarray of shape ``(nx, ny)``
            The template from ``arr`` that shall be searched
        fraction: float
            If not null, we will look through the given fraction of the
            template to look for partial matches as well
        increment: int
            The increment of the loop with the `fraction`.
        report: bool
            If True and `fraction` is not null, a QProgressDialog is opened
            to inform the user about the progress"""
        from skimage.feature import match_template
        mask = self.data_obj.selected_part
        x = mask.any(axis=0)
        if not x.any():
            raise ValueError("No data selected!")
        y = mask.any(axis=1)
        xmin = x.argmax()
        xmax = len(x) - x[::-1].argmax()
        ymin = y.argmax()
        ymax = len(y) - y[::-1].argmax()
        if arr.ndim == 3:
            mask = np.tile(mask[..., np.newaxis], (1, 1, arr.shape[-1]))
        src = np.where(mask[ymin:ymax, xmin:xmax], arr[ymin:ymax, xmin:xmax],
                       0)
        sny, snx = src.shape
        if not fraction:
            corr = match_template(src, template)
            full_shape = np.array(corr.shape)
        else:  # loop through the template to allow partial hatches
            shp = np.array(template.shape, dtype=int)[:2]
            ny, nx = shp
            fshp = np.round(fraction * shp).astype(int)
            fny, fnx = fshp
            it = list(
                product(range(0, fny, increment), range(0, fnx, increment)))
            ntot = len(it)
            full_shape = fshp - shp + src.shape
            corr = np.zeros(full_shape, dtype=float)
            if report:
                txt = 'Searching template...'
                dialog = QProgressDialog(txt, 'Cancel', 0, ntot)
                dialog.setWindowModality(Qt.WindowModal)
                t0 = dt.datetime.now()
            for k, (i, j) in enumerate(it):
                if report:
                    dialog.setValue(k)
                    if k and not k % 10:
                        passed = (dt.datetime.now() - t0).total_seconds()
                        dialog.setLabelText(txt + ' %1.0f seconds remaning' %
                                            ((passed * (ntot / k - 1.))))
                if report and dialog.wasCanceled():
                    return
                else:
                    y_end, x_start = fshp - (i, j) - 1
                    sly = slice(y_end, full_shape[0])
                    slx = slice(0, -x_start or full_shape[1])
                    corr[sly, slx] = np.maximum(
                        corr[sly, slx],
                        match_template(src, template[:-i or ny, j:]))
        ret = np.zeros_like(arr, dtype=corr.dtype)
        dny, dnx = src.shape - full_shape
        for i, j in product(range(dny + 1), range(dnx + 1)):
            ret[ymin + i:ymax - dny + i, xmin + j:xmax - dnx + j] = np.maximum(
                ret[ymin + i:ymax - dny + i, xmin + j:xmax - dnx + j], corr)
        return np.where(mask, ret, 0)

    def toggle_correlation_plot(self):
        """Toggle the correlation plot between :attr:`template` and :attr:`arr`
        """
        obj = self.data_obj
        if self._corr_plot is None:
            self._corr_plot = obj.ax.imshow(
                self._correlation,
                extent=obj._select_img.get_extent(),
                zorder=obj._select_img.zorder + 0.1)
            self._corr_cbar = obj.ax.figure.colorbar(self._corr_plot,
                                                     orientation='vertical')
            self._corr_cbar.set_label('Correlation')
        else:
            for a in [self._corr_cbar, self._corr_plot]:
                try:
                    a.remove()
                except ValueError:
                    pass
            del self._corr_plot, self._corr_cbar
        obj.draw_figure()

    def to_dock(self,
                main,
                title=None,
                position=None,
                docktype='df',
                *args,
                **kwargs):
        if position is None:
            position = main.dockWidgetArea(main.help_explorer.dock)
        connect = self.dock is None
        ret = super(PatternSelectionWidget, self).to_dock(main,
                                                          title,
                                                          position,
                                                          docktype=docktype,
                                                          *args,
                                                          **kwargs)
        if connect:
            self.dock.toggleViewAction().triggered.connect(self.maybe_tabify)
        return ret

    def maybe_tabify(self):
        main = self.dock.parent()
        if self.is_shown and main.dockWidgetArea(
                main.help_explorer.dock) == main.dockWidgetArea(self.dock):
            main.tabifyDockWidget(main.help_explorer.dock, self.dock)

    def cancel(self):
        if self.btn_select.isChecked():
            self.btn_select.setChecked(False)
            self.toggle_selection()
        self.close()

    def close(self):
        from psyplot_gui.main import mainwindow
        if self.selector is not None:
            self.selector.disconnect_events()
            for a in self.selector.artists:
                try:
                    a.remove()
                except ValueError:
                    pass
            self.data_obj.draw_figure()
            del self.selector
        if self._corr_plot is not None:
            self.toggle_correlation_plot()
        if self.key_press_cid is not None:
            self.data_obj.ax.figure.canvas.mpl_disconnect(self.key_press_cid)
        for attr in ['data_obj', 'arr', 'template', 'key_press_cid']:
            try:
                delattr(self, attr)
            except AttributeError:
                pass
        mainwindow.removeDockWidget(self.dock)
        return super(PatternSelectionWidget, self).close()
Esempio n. 3
0
class FormatoptionWidget(QWidget, DockMixin):
    """
    Widget to update the formatoptions of the current project

    This widget, mainly made out of a combobox for the formatoption group,
    a combobox for the formatoption, and a text editor, is designed
    for updating the selected formatoptions for the current subproject.

    The widget is connected to the :attr:`psyplot.project.Project.oncpchange`
    signal and refills the comboboxes if the current subproject changes.

    The text editor either accepts python code that will be executed by the
    given `console`, or yaml code.
    """

    no_fmtos_update = _temp_bool_prop('no_fmtos_update',
                                      """update the fmto combo box or not""")

    #: The combobox for the formatoption groups
    group_combo = None

    #: The combobox for the formatoptions
    fmt_combo = None

    #: The help_explorer to display the documentation of the formatoptions
    help_explorer = None

    #: The formatoption specific widget that is loaded from the formatoption
    fmt_widget = None

    #: A line edit for updating the formatoptions
    line_edit = None

    #: A multiline text editor for updating the formatoptions
    text_edit = None

    #: A button to switch between :attr:`line_edit` and :attr:`text_edit`
    multiline_button = None

    @property
    def shell(self):
        """The shell to execute the update of the formatoptions in the current
        project"""
        return self.console.kernel_manager.kernel.shell

    def __init__(self, *args, **kwargs):
        """
        Parameters
        ----------
        help_explorer: psyplot_gui.help_explorer.HelpExplorer
            The help explorer to show the documentation of one formatoption
        console: psyplot_gui.console.ConsoleWidget
            The console that can be used to update the current subproject via::

                psy.gcp().update(**kwargs)

            where ``**kwargs`` is defined through the selected formatoption
            in the :attr:`fmt_combo` combobox and the value in the
            :attr:`line_edit` editor
        ``*args, **kwargs``
            Any other keyword for the QWidget class
        """
        help_explorer = kwargs.pop('help_explorer', None)
        console = kwargs.pop('console', None)
        super(FormatoptionWidget, self).__init__(*args, **kwargs)
        self.help_explorer = help_explorer
        self.console = console
        self.error_msg = PyErrorMessage(self)

        # ---------------------------------------------------------------------
        # -------------------------- Child widgets ----------------------------
        # ---------------------------------------------------------------------
        self.group_combo = QComboBox(parent=self)
        self.fmt_combo = QComboBox(parent=self)
        self.line_edit = QLineEdit(parent=self)
        self.text_edit = QTextEdit(parent=self)
        self.run_button = QToolButton(parent=self)

        # completer for the fmto widget
        self.fmt_combo.setEditable(True)
        self.fmt_combo.setInsertPolicy(QComboBox.NoInsert)
        self.fmto_completer = completer = QCompleter(
            ['time', 'lat', 'lon', 'lev'])
        completer.setCompletionMode(QCompleter.PopupCompletion)
        completer.activated[str].connect(self.set_fmto)
        if with_qt5:
            completer.setFilterMode(Qt.MatchContains)
        completer.setModel(QStandardItemModel())
        self.fmt_combo.setCompleter(completer)

        self.dim_widget = DimensionsWidget(parent=self)
        self.dim_widget.setVisible(False)

        self.multiline_button = QPushButton('Multiline', parent=self)
        self.multiline_button.setCheckable(True)

        self.yaml_cb = QCheckBox('Yaml syntax')
        self.yaml_cb.setChecked(True)

        self.keys_button = QPushButton('Keys', parent=self)
        self.summaries_button = QPushButton('Summaries', parent=self)
        self.docs_button = QPushButton('Docs', parent=self)

        self.grouped_cb = QCheckBox('grouped', parent=self)
        self.all_groups_cb = QCheckBox('all groups', parent=self)
        self.include_links_cb = QCheckBox('include links', parent=self)

        self.text_edit.setVisible(False)

        # ---------------------------------------------------------------------
        # -------------------------- Descriptions -----------------------------
        # ---------------------------------------------------------------------

        self.group_combo.setToolTip('Select the formatoption group')
        self.fmt_combo.setToolTip('Select the formatoption to update')
        self.line_edit.setToolTip(
            'Insert the value which what you want to update the selected '
            'formatoption and hit right button. The code is executed in the '
            'main console.')
        self.yaml_cb.setToolTip(
            "Use the yaml syntax for the values inserted in the above cell. "
            "Otherwise the content there is evaluated as a python expression "
            "in the terminal")
        self.text_edit.setToolTip(self.line_edit.toolTip())
        self.run_button.setIcon(QIcon(get_icon('run_arrow.png')))
        self.run_button.setToolTip('Update the selected formatoption')
        self.multiline_button.setToolTip(
            'Allow linebreaks in the text editor line above.')
        self.keys_button.setToolTip(
            'Show the formatoption keys in this group (or in all '
            'groups) in the help explorer')
        self.summaries_button.setToolTip(
            'Show the formatoption summaries in this group (or in all '
            'groups) in the help explorer')
        self.docs_button.setToolTip(
            'Show the formatoption documentations in this group (or in all '
            'groups) in the help explorer')
        self.grouped_cb.setToolTip(
            'Group the formatoptions before displaying them in the help '
            'explorer')
        self.all_groups_cb.setToolTip('Use all groups when displaying the '
                                      'keys, docs or summaries')
        self.include_links_cb.setToolTip(
            'Include links to remote documentations when showing the '
            'keys, docs and summaries in the help explorer (requires '
            'intersphinx)')

        # ---------------------------------------------------------------------
        # -------------------------- Connections ------------------------------
        # ---------------------------------------------------------------------
        self.group_combo.currentIndexChanged[int].connect(self.fill_fmt_combo)
        self.fmt_combo.currentIndexChanged[int].connect(self.show_fmt_info)
        self.fmt_combo.currentIndexChanged[int].connect(self.load_fmt_widget)
        self.fmt_combo.currentIndexChanged[int].connect(
            self.set_current_fmt_value)
        self.run_button.clicked.connect(self.run_code)
        self.line_edit.returnPressed.connect(self.run_button.click)
        self.multiline_button.clicked.connect(self.toggle_line_edit)
        self.keys_button.clicked.connect(
            partial(self.show_all_fmt_info, 'keys'))
        self.summaries_button.clicked.connect(
            partial(self.show_all_fmt_info, 'summaries'))
        self.docs_button.clicked.connect(
            partial(self.show_all_fmt_info, 'docs'))

        # ---------------------------------------------------------------------
        # ------------------------------ Layouts ------------------------------
        # ---------------------------------------------------------------------
        self.combos = QHBoxLayout()
        self.combos.addWidget(self.group_combo)
        self.combos.addWidget(self.fmt_combo)

        self.execs = QHBoxLayout()
        self.execs.addWidget(self.line_edit)
        self.execs.addWidget(self.text_edit)
        self.execs.addWidget(self.run_button)

        self.info_box = QHBoxLayout()
        self.info_box.addWidget(self.multiline_button)
        self.info_box.addWidget(self.yaml_cb)
        self.info_box.addStretch(0)
        for w in [
                self.keys_button, self.summaries_button, self.docs_button,
                self.all_groups_cb, self.grouped_cb, self.include_links_cb
        ]:
            self.info_box.addWidget(w)

        self.vbox = QVBoxLayout()
        self.vbox.addLayout(self.combos)
        self.vbox.addWidget(self.dim_widget)
        self.vbox.addLayout(self.execs)
        self.vbox.addLayout(self.info_box)

        self.vbox.setSpacing(0)

        self.setLayout(self.vbox)

        # fill with content
        self.fill_combos_from_project(psy.gcp())
        psy.Project.oncpchange.connect(self.fill_combos_from_project)
        rcParams.connect('fmt.sort_by_key', self.refill_from_rc)

    def refill_from_rc(self, sort_by_key):
        from psyplot.project import gcp
        self.fill_combos_from_project(gcp())

    def fill_combos_from_project(self, project):
        """Fill :attr:`group_combo` and :attr:`fmt_combo` from a project

        Parameters
        ----------
        project: psyplot.project.Project
            The project to use"""
        if rcParams['fmt.sort_by_key']:

            def sorter(fmto):
                return fmto.key
        else:
            sorter = self.get_name

        current_text = self.group_combo.currentText()
        with self.no_fmtos_update:
            self.group_combo.clear()
            if project is None or project.is_main or not len(project):
                self.fmt_combo.clear()
                self.groups = []
                self.fmtos = []
                self.line_edit.setEnabled(False)
                return
            self.line_edit.setEnabled(True)
            # get dimensions
            it_vars = chain.from_iterable(arr.psy.iter_base_variables
                                          for arr in project.arrays)
            dims = next(it_vars).dims
            sdims = set(dims)
            for var in it_vars:
                sdims.intersection_update(var.dims)
            coords = [d for d in dims if d in sdims]
            coords_name = [COORDSGROUP] if coords else []
            coords_verbose = ['Dimensions'] if coords else []
            coords = [coords] if coords else []

            if len(project.plotters):
                # get formatoptions and group them alphabetically
                grouped_fmts = defaultdict(list)
                for fmto in project._fmtos:
                    grouped_fmts[fmto.group].append(fmto)
                for val in six.itervalues(grouped_fmts):
                    val.sort(key=sorter)
                grouped_fmts = OrderedDict(
                    sorted(six.iteritems(grouped_fmts),
                           key=lambda t: psyp.groups.get(t[0], t[0])))
                fmt_groups = list(grouped_fmts.keys())
                # save original names
                self.groups = coords_name + [ALLGROUP] + fmt_groups
                # save verbose group names (which are used in the combo box)
                self.groupnames = (
                    coords_verbose + ['All formatoptions'] +
                    list(map(lambda s: psyp.groups.get(s, s), fmt_groups)))
                # save formatoptions
                fmtos = list(grouped_fmts.values())
                self.fmtos = coords + [sorted(chain(*fmtos), key=sorter)
                                       ] + fmtos
            else:
                self.groups = coords_name
                self.groupnames = coords_verbose
                self.fmtos = coords
            self.group_combo.addItems(self.groupnames)
            ind = self.group_combo.findText(current_text)
            self.group_combo.setCurrentIndex(ind if ind >= 0 else 0)
        self.fill_fmt_combo(self.group_combo.currentIndex())

    def get_name(self, fmto):
        """Get the name of a :class:`psyplot.plotter.Formatoption` instance"""
        if isinstance(fmto, six.string_types):
            return fmto
        return '%s (%s)' % (fmto.name, fmto.key) if fmto.name else fmto.key

    @property
    def fmto(self):
        return self.fmtos[self.group_combo.currentIndex()][
            self.fmt_combo.currentIndex()]

    @fmto.setter
    def fmto(self, value):
        name = self.get_name(value)
        for i, fmtos in enumerate(self.fmtos):
            if i == 1:  # all formatoptions
                continue
            if name in map(self.get_name, fmtos):
                with self.no_fmtos_update:
                    self.group_combo.setCurrentIndex(i)
                self.fill_fmt_combo(i, name)
                return

    def toggle_line_edit(self):
        """Switch between the :attr:`line_edit` and :attr:`text_edit`

        This method is called when the :attr:`multiline_button` is clicked
        and switches between the single line :attr:``line_edit` and the
        multiline :attr:`text_edit`
        """
        # switch to multiline text edit
        if (self.multiline_button.isChecked()
                and not self.text_edit.isVisible()):
            self.line_edit.setVisible(False)
            self.text_edit.setVisible(True)
            self.text_edit.setPlainText(self.line_edit.text())
        elif (not self.multiline_button.isChecked()
              and not self.line_edit.isVisible()):
            self.line_edit.setVisible(True)
            self.text_edit.setVisible(False)
            self.line_edit.setText(self.text_edit.toPlainText())

    def fill_fmt_combo(self, i, current_text=None):
        """Fill the :attr:`fmt_combo` combobox based on the current group name
        """
        if not self.no_fmtos_update:
            with self.no_fmtos_update:
                if current_text is None:
                    current_text = self.fmt_combo.currentText()
                self.fmt_combo.clear()
                self.fmt_combo.addItems(list(map(self.get_name,
                                                 self.fmtos[i])))
                ind = self.fmt_combo.findText(current_text)
                self.fmt_combo.setCurrentIndex(ind if ind >= 0 else 0)
                # update completer model
                self.setup_fmt_completion_model()
            idx = self.fmt_combo.currentIndex()
            self.show_fmt_info(idx)
            self.load_fmt_widget(idx)
            self.set_current_fmt_value(idx)

    def set_fmto(self, name):
        self.fmto = name

    def setup_fmt_completion_model(self):
        fmtos = list(
            unique_everseen(map(self.get_name,
                                chain.from_iterable(self.fmtos))))
        model = self.fmto_completer.model()
        model.setRowCount(len(fmtos))
        for i, name in enumerate(fmtos):
            model.setItem(i, QStandardItem(name))

    def load_fmt_widget(self, i):
        """Load the formatoption specific widget

        This method loads the formatoption specific widget from the
        :meth:`psyplot.plotter.Formatoption.get_fmt_widget` method and
        displays it above the :attr:`line_edit`

        Parameters
        ----------
        i: int
            The index of the current formatoption"""
        self.remove_fmt_widget()
        group_ind = self.group_combo.currentIndex()
        if not self.no_fmtos_update:
            from psyplot.project import gcp
            if self.groups[group_ind] == COORDSGROUP:
                dim = self.fmtos[group_ind][i]
                self.fmt_widget = self.dim_widget
                self.dim_widget.set_dim(dim)
                self.dim_widget.set_single_selection(dim not in gcp()[0].dims)
                self.dim_widget.setVisible(True)
            else:
                fmto = self.fmtos[group_ind][i]
                self.fmt_widget = fmto.get_fmt_widget(self, gcp())
                if self.fmt_widget is not None:
                    self.vbox.insertWidget(2, self.fmt_widget)

    def reset_fmt_widget(self):
        idx = self.fmt_combo.currentIndex()
        self.load_fmt_widget(idx)
        self.set_current_fmt_value(idx)

    def remove_fmt_widget(self):
        if self.fmt_widget is not None:
            self.fmt_widget.hide()
            if self.fmt_widget is self.dim_widget:
                self.fmt_widget.reset_combobox()
            else:
                self.vbox.removeWidget(self.fmt_widget)
                self.fmt_widget.close()
            del self.fmt_widget

    def set_current_fmt_value(self, i):
        """Add the value of the current formatoption to the line text"""
        group_ind = self.group_combo.currentIndex()
        if not self.no_fmtos_update:
            if self.groups[group_ind] == COORDSGROUP:
                from psyplot.project import gcp
                dim = self.fmtos[group_ind][i]
                self.set_obj(gcp().arrays[0].psy.idims[dim])
            else:
                fmto = self.fmtos[group_ind][i]
                self.set_obj(fmto.value)

    def show_fmt_info(self, i):
        """Show the documentation of the formatoption in the help explorer
        """
        group_ind = self.group_combo.currentIndex()
        if (not self.no_fmtos_update
                and self.groups[group_ind] != COORDSGROUP):
            fmto = self.fmtos[self.group_combo.currentIndex()][i]
            fmto.plotter.show_docs(
                fmto.key, include_links=self.include_links_cb.isChecked())

    def run_code(self):
        """Run the update of the project inside the :attr:`shell`"""
        if self.line_edit.isVisible():
            text = str(self.line_edit.text())
        else:
            text = str(self.text_edit.toPlainText())
        if not text or not self.fmtos:
            return
        group_ind = self.group_combo.currentIndex()
        if self.groups[group_ind] == COORDSGROUP:
            key = self.fmtos[group_ind][self.fmt_combo.currentIndex()]
            param = 'dims'
        else:
            key = self.fmtos[group_ind][self.fmt_combo.currentIndex()].key
            param = 'fmt'
        if self.yaml_cb.isChecked():
            import psyplot.project as psy
            psy.gcp().update(**{key: yaml.load(text, Loader=yaml.Loader)})
        else:
            code = "psy.gcp().update(%s={'%s': %s})" % (param, key, text)
            if ExecutionInfo is not None:
                info = ExecutionInfo(raw_cell=code,
                                     store_history=False,
                                     silent=True,
                                     shell_futures=False)
                e = ExecutionResult(info)
            else:
                e = ExecutionResult()
            self.console.run_command_in_shell(code, e)
            try:
                e.raise_error()
            except Exception:  # reset the console and clear the error message
                raise
            finally:
                self.console.reset()

    def get_text(self):
        """Get the current update text"""
        if self.line_edit.isVisible():
            return self.line_edit.text()
        else:
            return self.text_edit.toPlainText()

    def get_obj(self):
        """Get the current update text"""
        if self.line_edit.isVisible():
            txt = self.line_edit.text()
        else:
            txt = self.text_edit.toPlainText()
        try:
            obj = yaml.load(txt, Loader=yaml.Loader)
        except Exception:
            self.error_msg.showTraceback("Could not load %s" % txt)
        else:
            return obj

    def insert_obj(self, obj):
        """Add a string to the formatoption widget"""
        current = self.get_text()
        use_yaml = self.yaml_cb.isChecked()
        use_line_edit = self.line_edit.isVisible()
        # strings are treated separately such that we consider quotation marks
        # at the borders
        if isstring(obj) and current:
            if use_line_edit:
                pos = self.line_edit.cursorPosition()
            else:
                pos = self.text_edit.textCursor().position()
            if pos not in [0, len(current)]:
                s = obj
            else:
                if current[0] in ['"', "'"]:
                    current = current[1:-1]
                self.clear_text()
                if pos == 0:
                    s = '"' + obj + current + '"'
                else:
                    s = '"' + current + obj + '"'
                current = ''
        elif isstring(obj):  # add quotation marks
            s = '"' + obj + '"'
        elif not use_yaml:
            s = repr(obj)
        else:
            s = yaml.dump(obj, default_flow_style=True).strip()
            if s.endswith('\n...'):
                s = s[:-4]
        if use_line_edit:
            self.line_edit.insert(s)
        else:
            self.text_edit.insertPlainText(s)

    def clear_text(self):
        if self.line_edit.isVisible():
            self.line_edit.clear()
        else:
            self.text_edit.clear()

    def set_obj(self, obj):
        self.clear_text()
        self.insert_obj(obj)

    def show_all_fmt_info(self, what):
        """Show the keys, summaries or docs of the formatoptions

        Calling this function let's the help browser show the documentation
        etc. of all docs or only the selected group determined by the state of
        the :attr:`grouped_cb` and :attr:`all_groups_cb` checkboxes

        Parameters
        ----------
        what: {'keys', 'summaries', 'docs'}
            Determines what to show"""
        if not self.fmtos:
            return
        if (self.all_groups_cb.isChecked()
                or self.group_combo.currentIndex() < 2):
            fmtos = list(
                chain.from_iterable(
                    fmto_group for i, fmto_group in enumerate(self.fmtos)
                    if self.groups[i] not in [ALLGROUP, COORDSGROUP]))
        else:
            fmtos = self.fmtos[self.group_combo.currentIndex()]
        plotter = fmtos[0].plotter
        getattr(plotter, 'show_' +
                what)([fmto.key for fmto in fmtos],
                      grouped=self.grouped_cb.isChecked(),
                      include_links=self.include_links_cb.isChecked())