Esempio n. 1
0
    def loadSubdb(self):
        self.sheets["substances"] = self.createSheet("substances")
        self.subdb = Subdb(self.edb)
        page = self.getPage(
            ["read", self.domain, self.edb.user, self.edb.name, "subdb_0"])

        #        self.subdb.readSubstances(
        #            filename="/local_disk/dvlp/airviro/loairviro/test/substances.out",
        #            keepEmpty=True)
        self.subdb.readSubstances(fileObject=page, keepEmpty=True)
        out = (("Index", "Substance name"), )
        indices = sorted(self.subdb.substNames.keys())
        for i, ind in enumerate(indices):
            substName = self.subdb.substNames[ind]
            out += ((ind, substName), )

        cellRange = self.sheets["substances"].getCellRangeByPosition(
            0, 0, 1,
            len(out) - 1)
        cellRange.setDataArray(out)
Esempio n. 2
0
    def loadSubdb(self):
        self.sheets["substances"] = self.createSheet("substances")
        self.subdb=Subdb(self.edb)
        page=self.getPage(["read",self.domain,self.edb.user,self.edb.name,
                           "subdb_0"])
        
#        self.subdb.readSubstances(
#            filename="/local_disk/dvlp/airviro/loairviro/test/substances.out",
#            keepEmpty=True)
        self.subdb.readSubstances(fileObject=page,keepEmpty=True)
        out=(("Index","Substance name"),)
        indices=sorted(self.subdb.substNames.keys())
        for i,ind in enumerate(indices):
            substName=self.subdb.substNames[ind]
            out+=((ind,substName),)

        cellRange=self.sheets[
            "substances"].getCellRangeByPosition(0,0,1,len(out)-1)
        cellRange.setDataArray(out)
Esempio n. 3
0
def main():
    #-----------Setting up and unsing option parser-----------------------
    parser=OptionParser(usage= usage, version=version)
    
    parser.add_option("-u",'--user',
                      action="store",dest="user",
                      help="Name of target edb user")

    parser.add_option("-e","--edb",
                      action="store",dest="edb",
                      help="Name of target edb")

    parser.add_option("-i","--infile",
                      action="store",dest="infile",
                      help="Input csv file")
    
 #   parser.add_option("-y","--year",
 #                     action="store",dest="year",
 #                     help="Only store sources for given year")
    
    parser.add_option("-v",dest='loglevel',
                      action="store_const",default=get_loglevel(),
                      help="produce verbose output")

    parser.add_option("-t", "--template",
                      action="store",dest="cf",default=None,
                      help="Generate default controlfile")

    parser.add_option("-o", "--outfile",
                      action="store",dest="outfile",default=None,
                      help="Name of outfiles (without extension)")

    parser.add_option("-d","--delimiter",
                      action="store",dest="delimiter",default="\t",
                      help="Delimiter used in csv-file")

    parser.add_option("-c","--filterCol",
                      action="store",dest="filterCol",
                      help="Header of column to use as filter")

    parser.add_option("-f","--filterVal",
                      action="store",dest="filterVal",
                      help="Value to use in filter")


#    parser.add_option("-g", "--geocodeRasterDir",
#                      action="store",dest="geocodeRasterDir",default=None,
#                      help="Directory with geocode rasters")
    


    (options, args) = parser.parse_args()
    
    #--------------------Init logger-----------------------
#     rootLogger = logger.RootLogger(level=options.loglevel)
    logging.basicConfig(
            format='%(levelname)s:%(name)s: %(message)s',
            level=options.loglevel,
    )
    global log
#     log = rootLogger.getLogger(sys.argv[0])
    log = logging.getLogger(parser.prog)

    #-----------------Validating options-------------------

    if options.cf is not None:
        generateCf(path.abspath(options.cf),controlFileTemplate)
        log.info("Wrote default controlfile")
        return 1

    if options.user is None:
        log.error("Need to specify -u <user>")
        return 1
    if options.edb is None:
        log.error("Need to specify -e <edb>")
        return 1
#    if options.year is None:
#        log.error("Need to specify -y <year>")
#        return 1
#    if len(options.year)!=4:
#        log.error("Year should be given with four digits")
#        return 1


    if len(args)!=1:
        log.error("Controlfile should be given as argument")
        return 1

    dmn=Domain()
    edb=Edb(dmn,options.user,options.edb)
    if not edb.exists():
        log.error("Edb %s does not exist" %options.edb)
        return 1

    log.info("Parsing controlfile")

    cf=ControlFile(args[0])
    cdbPars=re.compile("companydb\.par\.(\w*?):").findall(cf.content)
    fdbPars=re.compile("facilitydb\.par\.(\w*?):").findall(cf.content)
    sdbPars=re.compile("sourcedb\.par\.(\w*?):").findall(cf.content)
    substEmisNr=re.compile("sourcedb\.subst_emis\.([0-9]*)\.emis").findall(cf.content)
    subgrpEmisNr=re.compile("sourcedb\.subgrp_emis\.([0-9]*)\.emis").findall(cf.content)

    cdbCols={}
    cdbDefaults={}
    for par in cdbPars:
        cdbCols[par]=cf.findString("companydb.par.%s:" %par)
        cdbDefaults[par]=cf.findString("companydb.par.%s.default:" %par,
                                       optional=True,default=None)
    fdbCols={}
    fdbDefaults={}
    for par in fdbPars:
        fdbCols[par]=cf.findString("facilitydb.par.%s:" %par)
        fdbDefaults[par]=cf.findString("facilitydb.par.%s.default:" %par,
                                       optional=True,default=None)

    sdbCols={}
    sdbDefaults={}
    for par in sdbPars:
        sdbCols[par]=cf.findString("sourcedb.par.%s:" %par)
        sdbDefaults[par]=cf.findString("sourcedb.par.%s.default:" %par,
                                       optional=True,default=None)

    substEmisCols={}
    substEmisDefaults={}
    if substEmisNr is not None:
        for emisNr in substEmisNr:
            cols={}
            defaults={}
            emisPars=re.compile("sourcedb\.subst_emis\.%s\.(\w*?):" %(emisNr)).findall(cf.content)
            emisDefaultPars=re.compile(
                "sourcedb\.subst_emis\.%s\.(\w*?)\.default:" %(emisNr)).findall(cf.content)
            if emisPars is not None:
                for par in emisPars:            
                    cols[par]=cf.findString("sourcedb.subst_emis.%s.%s:" %(emisNr,par))        
            if emisDefaultPars is not None:        
                for par in emisDefaultPars:    
                    defaults[par]=cf.findString("sourcedb.subst_emis.%s.%s.default:" %(emisNr,par),
                                                optional=True,default=None)
            substEmisCols[emisNr]=cols
            substEmisDefaults[emisNr]=defaults

    subgrpEmisCols={}
    subgrpEmisDefaults={}
    if subgrpEmisNr is not None:
        for emisNr in subgrpEmisNr:
            cols={}
            defaults={}
            emisPars=re.compile("sourcedb\.subgrp_emis\.%s\.(\w*?):" %(emisNr)).findall(cf.content)
            emisDefaultPars=re.compile(
                "sourcedb\.subgrp_emis\.%s\.(\w*?)\.default:" %(emisNr)).findall(cf.content)
            if emisPars is not None:
                for par in emisPars:            
                    cols[par]=cf.findString("sourcedb.subgrp_emis.%s.%s:" %(emisNr,par))        
            if emisDefaultPars is not None:        
                for par in emisDefaultPars:    
                    defaults[par]=cf.findString("sourcedb.subgrp_emis.%s.%s.default:" %(emisNr,par),
                                                optional=True,default=None)
            subgrpEmisCols[emisNr]=cols
            subgrpEmisDefaults[emisNr]=defaults
        

    log.info("Reading subdb...")
    subdb=Subdb(edb)
    subdb.read()

    log.info("Reading companydb...")
    companydb=Companydb(edb)
    companydb.read()

    log.info("Reading sourcedb...")
#     source_stream = SourceStream(edb, 'w')
    source_stream = open(options.outfile, 'w')
    source_writer = ModelWriter(source_stream,encoding="HP Roman8")


    log.info("Reading facilitydb...")
    facilitydb=Facilitydb(edb)
    facilitydb.read()


    log.info("Reading subgrpdb")
    subgrpdb=Subgrpdb(edb)

    subgrpdb.read()

    log.info("Reading edb.rsrc")
    rsrc=Rsrc(edb.rsrcPath())
    
    acCodeTables=[]
    for i in range(rsrc.numberOfCodeTrees("ac")):
        acCodeTables.append(CodeTable(rsrc.path,codeType="ac",codeIndex=i+1))

    gcCodeTables=[]
    for i in range(rsrc.numberOfCodeTrees("gc")):
        gcCodeTables.append(CodeTable(rsrc.path,codeType="gc",codeIndex=i+1))
        

    geocodeRasters=[]
    rast1=Raster()
    rast1.read("/usr/airviro/data/geo/topdown/dynamicRasters/dynamic__GEOCODE__1.txt")
    rast2=Raster()
    rast2.read("/usr/airviro/data/geo/topdown/dynamicRasters/dynamic__GEOCODE__2.txt")
    geocodeRasters.append(rast1)
    geocodeRasters.append(rast2)

    log.info("Reading csv-file")
    table=DataTable()
    table.read(options.infile,delimiter=options.delimiter,encoding="ISO-8859-15")

    if options.filterCol is not None:
        if options.filterCol not in table.colIndex:
            log.error("Filter column header not found in table")
            sys.exit(1)

    invalid=False
    nFiltered=0
    nRows=0

    log.info("Processing rows")
    for rowInd,row in enumerate(table.data):
        nRows+=1
        if options.filterCol is not None:
            filterVal=row[table.colIndex[options.filterCol]]
            if options.filterVal!=str(filterVal):
                nFiltered+=1
                continue

        comp = Company()
        for par in comp.parOrder:
            val=cdbDefaults.get(par,None)
            if par in cdbCols:
                colId=cdbCols[par]
                try:
                    tableVal=row[table.colIndex[colId]]
                except KeyError:
                    log.error(
                        "No column with header %s, columns: %s" %(
                            colId,str(table.listIds())))
                if tableVal is not None:
                    val = tableVal
            if val is not None:
                #Too long names are truncated
                if par=="NAME" and len(val)>45:
                    val=val[:45]
                comp[par]=val

        fac = Facility()
        for par in fac.parOrder:
            val=fdbDefaults.get(par,None)
            if par in fdbCols:
                colId=fdbCols[par]
                tableVal=row[table.colIndex[colId]]
                if tableVal is not None:
                    val = tableVal
            if val is not None:
                #Too long names are truncated
                if par=="NAME" and len(val)>45:
                    val=val[:45]
                fac[par]=val

        src = Source()       
        for par in ["X1", "Y1","X2","Y2",
                    "PX","PY","NAME","INFO","INFO2","DATE","CHANGED",
                    "CHIMNEY HEIGHT","GASTEMPERATURE","GAS FLOW",
                    "SEARCHKEY1","SEARCHKEY2","SEARCHKEY3",
                    "SEARCHKEY4","SEARCHKEY5","CHIMNEY OUT","CHIMNEY IN",
                    "HOUSE WIDTH","HOUSE HEIGHT","NOSEGMENTS","BUILD_WIDTHS",
                    "BUILD_HEIGHTS","BUILD_LENGTHS","BUILD_DISTFARWALL",
                    "BUILD_CENTER","GEOCODE","FORMULAMACRO","ALOB"]:
            val=sdbDefaults.get(par,None)
            if par in sdbCols:
                colId=sdbCols[par]
                tableVal=row[table.colIndex[colId]]
                if tableVal is not None:
                    val = tableVal
            if val is not None:
                #validate code
                if par=="GEOCODE" and val is not None:
                    gcList=val.split()
                    for codeIndex,code in enumerate(gcList):
                        if not gcCodeTables[codeIndex].hasCode(code):
                            log.error("Invalid geo code %s on row %i" %(code,rowInd))
                            invalid=True
                #Too long names are truncated
                if par=="NAME" and len(val)>45:
                    val=val[:45]

                #Store in src object and convert to correct type
                src._fieldvalues[par] = lazy_parse(
                    src, par, val)

        gc1=geocodeRasters[0].getVal(src.get_coord()[0],src.get_coord()[1])
        gc2=geocodeRasters[1].getVal(src.get_coord()[0],src.get_coord()[1])
        src.GEOCODE = [str(int(gc1)) + "." + str(int(gc2))]

        for emisNr,emis in substEmisCols.items():
            substEmis={"unit":None,"ac":None,"substance":None,"emis":None}

            for par in substEmis.keys():
                if par in emis:
                    substEmis[par]=row[table.colIndex[emis[par]]]
                else:
                    try:
                        substEmis[par]=substEmisDefaults[emisNr][par]
                    except KeyError:
                        log.error(
                            "Need to specify column or default value for subgrp emis %i" %emisNr)

            
            substInd=subdb.substIndex(substEmis["substance"])
            if substInd is None:
                log.error("Invalid substance name %s on row %i" %(
                        substEmis["substance"],rowInd))
                sys.exit(1)

            try:
                unit=rsrc.sub[substEmis["unit"]]
            except KeyError:
                log.error("Invalid unit name %s on row %i" %(emis["unit"],rowInd))
                sys.exit(1)

            acList=substEmis["ac"].split('\\')[0].split()
            for codeIndex,code in enumerate(acList):
#                 if code == "2.A.4.2":
#                     import pdb; pdb.set_trace()
                refCode = acCodeTables[codeIndex].checkCode(code)
                if refCode == "-":
                    log.error("Invalid activity code %s on row %i" %(code,rowInd))
                    sys.exit(1)
                if refCode != code:
                    acList[codeIndex] = refCode
            substEmis["ac"] = acList
            
            if substEmis["emis"] is not None and substEmis["emis"]!="0":
                try:
                    emis = src.add_emission()
                    emis.UNIT = substEmis["unit"] 
                    emis.ACTCODE = substEmis["ac"]  # needs re-formatting
                    emis.EMISSION = float(substEmis["emis"])
                    emis.SUBSTANCE = substInd

                    emis.auto_adjust_unit(edb) 


                except:            
#                     print substEmis
#                     log.error("Invalid substance emission on row %i" %rowInd)
                    invalid=True
                    src.EMISSION=src.EMISSION[:-1]


        for emis in subgrpEmisCols.values():
            subgrpEmis={"unit":None,"ac":None,"name":None,"emis":None}
            for par in subgrpEmis.keys():
                if par in emis:
                    subgrpEmis[par]=row[table.colIndex[emis[par]]]
                else:
                    try:
                        subgrpEmis[par]=subgrpEmisDefaults[emisNr][par]
                    except KeyError:
                        log.error(
                            "Need to specify column or default value for subgrp emis %i" %emisNr)

            #validating subgrp name
            try:                        
                subgrp=subgrpdb.getByName(subgrpEmis["name"])
            except KeyError:
                log.error("Invalid subgrp name %s on row %i" %(subgrpEmis["name"],rowInd))
                invalid=True

            #validating subgrp emis unit
            try:                
                unitFactor=rsrc.subGrpEm[subgrpEmis["unit"]]
            except KeyError:
                log.error("Invalid unit %s for subgrp emission on row %i" %(
                        subgrpEmis["unit"],rowInd))
                invalid=True

            #validating subgrp activity code
            acList=subgrpEmis["ac"].split()
            for codeIndex,code in enumerate(acList):
                refCode = acCodeTables[codeIndex].checkCode(code)
                if refCode == "-":
                    log.error("Invalid activity code %s on row %i" %(code,rowInd))
                    invalid=True
                    break
                if refCode != code:
                    acList[codeIndex] = refCode
            substEmis["ac"] = acList

            try:
                src.addSubgrpEmis(subgrp.index,emis=subgrpEmis["emis"],unit=subgrpEmis["unit"],
                                  ac=subgrpEmis["ac"])
            except:            
                log.error("Invalid subgrp emission on row %i" %rowInd)
                invalid=True

        companydb.append(comp,force=True)
        facilitydb.append(fac,force=True)
        source_writer.write(src)
#         sourcedb.append(src)

    if invalid:
        log.info("No output written due to validation errors")
        sys.exit(0)
    if len(companydb.items)>0:
        if options.outfile is None:
            log.info("Writing companydb")
        else:
            log.info("Writing company db to file")
        companydb.write(filename=options.outfile+".companydb")

    if len(facilitydb.items)>0:
        if options.outfile is  None:
            log.info("Writing facilitydb")
        else:
            log.info("Writing facilitydb to file")
        facilitydb.write(filename=options.outfile+".facilitydb")

#     if len(sourcedb.sources)>0:
#         if options.outfile is None:
#             log.info("Writing sourcedb")
#         else:
#             log.info("Writing sourcedb to file")
#     sourcedb.write(filename=options.outfile+".sourcedb")

    if options.filterCol is not None:
        log.info("Filtered out %i out of %i" %(nFiltered,nRows))
Esempio n. 4
0
def main():
    #-----------Setting up and unsing option parser-----------------------
    parser=OptionParser(usage= usage, version=version)
    
    parser.add_option('--src_user',
                      action="store",dest="src_user",
                      help="Name of target edb user")

    parser.add_option("--src_edb",
                      action="store",dest="src_edb",
                      help="Name of target edb")

    parser.add_option('--tgt_user',
                      action="store",dest="tgt_user",
                      help="Name of target edb user")

    parser.add_option("--tgt_edb",
                      action="store",dest="tgt_edb",
                      help="Name of target edb")

    parser.add_option("--codeIndex",
                      action="store",dest="codeIndex",
                      help="Activity code index to use for filter")

    parser.add_option("--codeValue",
                      action="store",dest="codeValue",
                      help="Activity code value to filter by")

    parser.add_option("-l", "--loglevel",
                      action="store",dest="loglevel",default=2,
                      help="Sets the loglevel (0-3 where 3=full logging)")

    parser.add_option("-o", "--outfile",
                      action="store",dest="outfile",
                      help="Output filenam, leave out to write directly to target edb")

    (options, args) = parser.parse_args()
    
    #--------------------Init logger-----------------------
    rootLogger = logger.RootLogger(level=options.loglevel)
    global log
    log = rootLogger.getLogger(sys.argv[0])

    #-----------------Validating options-------------------

    if options.src_user is None:
        log.error("Need to specify --src_user <user>")
        return 1
    if options.src_edb is None:
        log.error("Need to specify --src_edb <edb>")
        return 1

    if options.tgt_user is None:
        log.error("Need to specify --tgt_user <user>")
        return 1
    if options.tgt_edb is None:
        log.error("Need to specify --tgt_edb <edb>")
        return 1


    if len(args)!=0:
        log.error("No argument expected")
        return 1

    dmn=Domain()
    src_edb=Edb(dmn,options.src_user,options.src_edb)
    tgt_edb=Edb(dmn,options.tgt_user,options.tgt_edb)

    if not src_edb.exists():
        log.error("Source edb %s does not exist") %options.src_edb
        return 1

    if not tgt_edb.exists():
        log.error("Target edb %s does not exist") %options.tgt_edb
        return 1

    if options.codeIndex is None:
        log.error("No code index specified")
        return 1

    if options.codeValue is None:
        log.error("No code value specified")
        return 1

    log.info("Reading subdb...")
    src_subdb=Subdb(src_edb)
    src_subdb.read()

    log.info("Reading sourcedb...")
    src_sourcedb=Sourcedb(src_edb)
    src_sourcedb.read()
    

    tgt_sourcedb=Sourcedb(tgt_edb)
    tgt_sourcedb.read()

    #log.info("Reading subgrpdb")
    #src_subgrpdb=Subgrpdb(src_edb)
    #src_subgrpdb.read()

    log.info("Reading edb.rsrc")
    src_rsrc=Rsrc(src_edb.rsrcPath())
    tgt_rsrc=Rsrc(tgt_edb.rsrcPath())

    log.info("Reading target sourcedb...")


    acCodeTables=[]
    for i in range(tgt_rsrc.numberOfCodeTrees("ac")):
        acCodeTables.append(CodeTable(tgt_rsrc.path,codeType="ac",codeIndex=i+1))

    gcCodeTables=[]
    for i in range(tgt_rsrc.numberOfCodeTrees("gc")):
        gcCodeTables.append(CodeTable(tgt_rsrc.path,codeType="gc",codeIndex=i+1))



    copiedSources=0
    readSources=0
    for src in src_sourcedb.sources:
        hasEmis=False
        src["PX"]=0
        src["PY"]=0
                      
        toBeRemoved=[]
        for substInd,emis in src.subst_emis.iteritems():
            ac= emis["ACTCODE"][int(options.codeIndex)-1]
            ac=[c for c in ac if c!="-"]
            emis["ACTCODE"][int(options.codeIndex)-1]=ac #Remove '-'from code

            ac=".".join(ac)
            
            if ac!=options.codeValue:
                toBeRemoved.append(substInd)

        for key in toBeRemoved:
            src.removeSubstEmis(key)

        if src.subst_emis!={}:
            hasEmis=True
        
        toBeRemoved=[]
        for subgrpInd,emis in src.subgrp_emis.iteritems():
            ac= emis["ACTCODE"][int(options.codeIndex)-1]
            ac=[c for c in ac if c!="-"]
            emis["ACTCODE"][int(options.codeIndex)-1]=ac #Remove '-'from code
            ac=".".join(ac)

            
            if ac!=options.codeValue:
                toBeRemoved.append(subgrpInd)

        for key in toBeRemoved:
            src.removeSubgrpEmis(key)

        if src.subgrp_emis!={}:
            hasEmis=True


        toBeRemoved=[]
        for actInd,emis in src.activity_emis.iteritems():
            ac= emis["ACTCODE"][int(options.codeIndex)-1]
            ac=[c for c in ac if c!="-"]
            emis["ACTCODE"][int(options.codeIndex)-1]=ac #Remove '-'from code
            ac=".".join(ac)
            
            if ac!=options.codeValue:
                toBeRemoved.append(actInd)

        for key in toBeRemoved:
            src.removeActivityEmis(key)

        if src.activity_emis!={}:
            hasEmis=True

        readSources+=1
        if hasEmis:
            copiedSources+=1
            tgt_sourcedb.sources.append(src)

    if options.outfile is None:
        log.info("Writing sources to target edb")
    else:
        log.info("Writing sources to file")

    tgt_sourcedb.write(filename=options.outfile,force=True)

    log.info("Successfully Copied %i out of %i sources" %(copiedSources,readSources))
Esempio n. 5
0
def main():
    #-----------Setting up and unsing option parser-----------------------
    parser=OptionParser(usage= usage, version=version)
                      
    parser.add_option("-l", "--loglevel",
                      action="store",dest="loglevel",default=2,
                      help="Sets the loglevel (0-3 where 3=full logging)")

    parser.add_option("-e","--edb",
                      action="store",dest="edb",
                      help="Edb to fetch ship data from")

    parser.add_option("-u","--user",
                      action="store",dest="user",default=None,
                      help="Owner of edb to fetch ship data from")
    
    parser.add_option("-o","--outfile",
                      action="store",dest="outfile",default=None,
                      help="Output file")
    
    parser.add_option("--MMSI",
                      action="store",dest="MMSI",default=None,
                      help="Text-file with mmsi to process")
    
    parser.add_option("--begin",
                      action="store",dest="begin",default=None,
                      help="Begin processing at 'YYMMDDhhmm'")
    
    parser.add_option("--end",
                      action="store",dest="end",default=None,
                      help="End processing at 'YYMMDDhhmm'")
    

    parser.add_option("-s","--subst",
                      action="store",dest="substance",
                      help="Substance to process")
    

    (options, args) = parser.parse_args()
    
    #--------------------Init logger-----------------------
    rootLogger=logger.RootLogger(int(options.loglevel))
    global log
    log = rootLogger.getLogger(sys.argv[0])

    #-----------------Validating options-------------------
    if options.MMSI is None:
        log.error("Need to specify '--MMSI <MMSI>'")
        return 1

    if options.begin is None:
        log.error("Need to specify '--begin <YYMMDDhh>'")
        return 1
    else:
        begin=string2date(options.begin)

    if options.end is None:
        log.error("Need to specify '--end <YYMMDDhh>'")
        return 1
    else:
        end=string2date(options.end)
    
    if options.outfile is None:
        log.error("Need to specify -o <output file>")
        return 1    

    if options.edb is None:
        log.error("Need to specify -e <edb>")
        return 1
    
    if options.user is None:
        log.error("Need to specify -u <user>")
        return 1
    
    dmn=Domain()
    edb = Edb(dmn,options.user,options.edb)

    sourcedb=Sourcedb(edb)
    sourcedb.read(X1=SHIPFLAG,Y1=int(options.MMSI))

    src=sourcedb.sources[0]
    emfacdb= Emfacdb(edb)
    emfacdb.read()

    subdb=Subdb(edb)
    subdb.readSubstances()

    foundEfForSubst=False
    v={}
    for efInd,ef in emfacdb.activities.items():
        if subdb[ef.subst]!=options.substance:
            continue
        
        foundEfForSubst=True
        for varInd,var in ef.vars.items():
            if efInd not in src.activity_emis:
                log.error("Emission factor with index %i for substance %s not used by source" %(efInd,options.substance))
                return 1
            ind,varVal=src.activity_emis[efInd]["VARLIST"][varInd-1]
            v[var.name]=float(varVal)
    
    if not foundEfForSubst:
        log.error("Did not find any emission factor for substance %s" %options.substance)
        
    output=open(path.abspath(options.outfile),"w")
    output.write("MMSI: %s\n" %options.MMSI)
    output.write("Substance: %s\n" %options.substance)
    output.write(str(v)+"\n")
    output.write("Datetime\tSpeed [knots]\tStatus\tEmis [g/s]\tAirviro plot emis [g/s]\tEmis [g]\n")    

    ts=series.ShipTs(begin=begin,end=end,res=300)
    ts.read(int(options.MMSI))
    if ts.nvals()==0:
        log.info("No data for ship in specified interval")
        return 0

    if options.substance!="Veh km":
        k=(0.85*v["P_ME_inst"])/pow(v["Vmax"]*0.94,3)

    totEmis=0

    #init coordinates to first record in ts
    initRec=0
    while ts.data[initRec,3] is np.ma.masked:
        initRec+=1        
    x=ts.data[initRec,3]
    y=ts.data[initRec,4]

    gap=0
    for i in range(initRec,ts.nvals()):
        #set last valid coordinate to x1
        if x is not np.ma.masked and y is not np.ma.masked:
            x1=x
            y1=y
        x=ts.data[i,3]
        y=ts.data[i,4]

        if x is np.ma.masked  or y is np.ma.masked:
            gap+=5
            continue

        if gap>MAXGAP:
            log.debug(" %s - AIS gap %i minutes > max (%i minutes), no emis calculated" %(ts.toDatetime(i).strftime("%y%m%d %H:%M"),gap,MAXGAP))
            gap=0
            continue
        
        dist=np.sqrt(pow(x-x1,2)+pow(y-y1,2))
        
        speed=(dist/300.0)/ KNOTS2MPERS
        if speed>MAXKNOTS:
            log.debug(" %s - speed %f knots > max (%f knots), no emis calculated" %(ts.toDatetime(i).strftime("%y%m%d %H:%M"),speed,MAXKNOTS))
            continue
        status=ts.data[i,5]        
        emis=None

        if options.substance=="Fuel consumption":
            if status == 1: #cruise
                P_ME_cruise=k*pow(speed,3)
                if P_ME_cruise>v["P_ME_inst"]:
                    P_ME_cruise=v["P_ME_inst"]

                emis=(P_ME_cruise*v["SFC_ME"]+
                      v["P_AE_inst"]*v["AE_usage_cruise"]*v["SFC_AE"]
                      )/3600.0

            elif status==2: #man
                emis=(v["P_ME_inst"]*v["ME_usage_man"]*v["SFC_ME"]+
                      v["P_AE_inst"]*0.5)/3600.0

            elif status==3: #hotelling
                emis=(v["P_AE_inst"]*v["AE_usage_hotel"]*v["SFC_AE"])/3600.0

            elif status==4: #ops
                emis=0
        elif options.substance=="Veh km":
            #emis=speed*KNOTS2MPERS
            emis=dist*0.001
            totEmis+=dist/1000.0        
        
        timediff=end-begin
        nhours=timediff.days*24+timediff.seconds/3600
        if emis is not None:
            output.write("%s\t%f\t%i\t%f\t%f\t%f\n" %(ts.toDatetime(i).strftime("%Y%m%d %H:%M"),speed,status,emis,emis/(nhours*12),emis*300))
        gap=0

    print "Total emission is %f" %totEmis            
Esempio n. 6
0
class LoadEdb(XJobExecutor, unohelper.Base):
    """
    Load an Airviro edb into a number of spreadsheets
    """
    def __init__(self, ctx):
        self.ctx = ctx
        self.desktop = self.ctx.ServiceManager.createInstanceWithContext(
            "com.sun.star.frame.Desktop", self.ctx)
        self.doc = self.desktop.getCurrentComponent()
        self.sheets = {
            "sources": None,
            "substance groups": None,
            "emfac": None,
            "substances": None,
            "units": None
        }
        self.edb = None
        self.subdb = None
        self.subgrpdb = None
        self.host = None
        self.auth = None
        self.user = None
        self.edb = None
        self.domain = None

    def login(self, host, domain, user, pw):
        if "http://" not in host:
            host = "http://" + host

        #todo: get authenticator via https
        self.auth = "gmX=QxTLA3Cz3=9aacZk0k9Zae_FW8Kznq+9B_7_i3i0"
        self.domain = domain
        self.user = user
        self.host = host

    def setEdb(self, domainName, userName, edbName):
        self.edb = Edb(domainName, userName, edbName)

    def getPage(self, argList):
        req = "%s/cgi-bin/iairviro/do.cgi?%s&loAirviro.cgi&%s" % (
            self.host, self.auth, "&".join(argList))
        page = urllib2.urlopen(req)
        return page

    def loadSubdb(self):
        self.sheets["substances"] = self.createSheet("substances")
        self.subdb = Subdb(self.edb)
        page = self.getPage(
            ["read", self.domain, self.edb.user, self.edb.name, "subdb_0"])

        #        self.subdb.readSubstances(
        #            filename="/local_disk/dvlp/airviro/loairviro/test/substances.out",
        #            keepEmpty=True)
        self.subdb.readSubstances(fileObject=page, keepEmpty=True)
        out = (("Index", "Substance name"), )
        indices = sorted(self.subdb.substNames.keys())
        for i, ind in enumerate(indices):
            substName = self.subdb.substNames[ind]
            out += ((ind, substName), )

        cellRange = self.sheets["substances"].getCellRangeByPosition(
            0, 0, 1,
            len(out) - 1)
        cellRange.setDataArray(out)

    def loadSubgrpdb(self):
        self.sheets["substance groups"] = self.createSheet("substance groups")
        self.subgrpdb = Subgrpdb(self.edb)
        page = self.getPage(
            ["read", self.domain, self.edb.user, self.edb.name, "subgrpdb"])
        self.subgrpdb.read(fileObject=page)
        #            filename="/local_disk/dvlp/airviro/loairviro/test/subgrp.out")

        substances = []
        for subgrpInd, subgrp in self.subgrpdb.subgrps.items():
            for subst in subgrp.substances:
                substName = self.subdb.substNames[subst]
                if substName not in substances:
                    substances.append(substName)

        header1 = ("", "")
        header2 = ("Index", "Name")
        for substName in substances:
            header1 += (substName, "", "")
            header2 += ("Slope", "Offset", "Unit")

        out = (header1, header2)
        for subgrpInd, subgrp in self.subgrpdb.subgrps.items():
            #list names of substances in subgrp
            substInSubgrp = [self.subdb[s] for s in subgrp.substances]
            row = (subgrp.index, subgrp.name)
            for substName in substances:
                if substName in substInSubgrp:
                    substIndex = self.subdb.substIndices[substName]
                    slope = subgrp.substances[substIndex]["slope"]
                    offset = subgrp.substances[substIndex]["offset"]
                    unit = subgrp.substances[substIndex]["unit"]
                else:
                    slope = ""
                    offset = ""
                    unit = ""
                row += (slope, offset, unit)
            out += (row, )

        cellRange = self.sheets["substance groups"].getCellRangeByPosition(
            0, 0,
            len(header1) - 1,
            len(out) - 1)
        cellRange.setDataArray(out)

    def loadEmfacdb(self):
        self.sheets["emission factors"] = self.createSheet("emission factors")
        self.emfacdb = Emfacdb(self.edb)
        page = self.getPage(
            ["read", self.domain, self.edb.user, self.edb.name, "emfacdb"])
        self.emfacdb.read(fileObject=page)
        #            filename="/local_disk/dvlp/airviro/loairviro/test/emfac.out")
        nvars = [len(emfac.vars) for emfac in self.emfacdb.activities.values()]
        nvars = max(nvars)

        firstRow = 0
        for emfacInd, emfac in self.emfacdb.activities.items():
            out = []
            out.append(("Index:", emfacInd))
            out.append(("Name:", emfac.name))
            out.append(("Substance:", self.subdb[emfac.subst]))
            varIndices = []
            varNames = []
            varTypes = []
            formula = emfac.formula
            for i in range(1, len(emfac.vars) + 1):
                formula.replace("X%i" % i, emfac.vars[i].name)
                varIndices.append(str(i))
                varNames.append(emfac.vars[i].name)
                varTypes.append(emfac.vars[i].type)
            out.append(("Formula", formula))
            out.append(("Variable index:", ) + tuple(varIndices))
            out.append(("Variable names:", ) + tuple(varNames))
            out.append(("Variable types:", ) + tuple(varTypes))
            out.append(("", ))
            out.append(("", ))

            lastRow = firstRow + len(out) - 1
            lastCol = len(varIndices)

            #Make so all rows have the same length
            #Needed to use setDataArray
            for i in range(len(out)):
                completeRow = ("", ) * (lastCol - (len(out[i]) - 1))
                out[i] += completeRow

            cellRange = self.sheets["emission factors"].getCellRangeByPosition(
                0, firstRow, lastCol, lastRow)
            firstRow = lastRow + 1
            cellRange.setDataArray(tuple(out))

    def createSheet(self, name):
        try:
            sheets = self.doc.getSheets()
        except Exception:
            raise TypeError("Model retrived was not a spreadsheet")

        #TODO: warning dialogue before removing sheet
        if sheets.hasByName(name):
            sheets.removeByName(name)

        pos = sheets.getCount()
        sheets.insertNewByName(name, pos)
        return sheets.getByIndex(pos)

    def loadSources(self):
        self.sheets["sources"] = self.createSheet("sources")
        sourcedb = Sourcedb(self.edb)

        page = self.getPage(
            ["read", self.domain, self.edb.user, self.edb.name, "sourcedb"])
        #filename="/local_disk/dvlp/airviro/loairviro/test/TR_ships.out"

        substEmis = {}
        substAlob = {}
        subgrpEmis = {}
        subgrpAlob = {}
        activityEmis = {}
        activityAlob = {}
        srcAlobs = {}

        #Reading sources
        batchInd = 0
        while sourcedb.read(fileObject=page, accumulate=True, batchSize=1):
            self.updateProgressDlg("Loading point and area sources",
                                   "read batch %i" % batchInd)
            #print "Read batch %i" %batchInd
            batchInd += 1

        self.updateProgressDlg("Loading point and area sources",
                               "writing sources to sheet")
        #To present sources in a table with a nice header, it is necessary
        #to list all substances, alobs, subgroups, emfacs and variables that are
        #used in the edb. This is because each alob, substance etc. should be
        #shown only once in the header
        for src in sourcedb.sources:
            #Accumulate all alobs into a list
            for alob in src.ALOBOrder:
                srcAlobs[alob] = None

            #store all substances and their alobs in a dict
            for substInd, emis in src.subst_emis:
                if substInd not in substEmis:
                    substEmis[substInd] = {"alob": {}}
                for alob in emis.ALOBOrder:
                    substEmis[substInd]["alob"][alob] = None

            #store all substance groups and their alobs in a dict
            for subgrpInd, emis in src.subgrp_emis.items():
                if subgrpInd not in subgrpEmis:
                    subgrpEmis[subgrpInd] = {"alob": {}}
                for alob in emis.ALOBOrder:
                    subgrpEmis[subgrpInd]["alob"][alob] = None

            #Accumulate all activities and included alobs
            for emfacInd, emis in src.activity_emis.items():
                if emfacInd not in activityEmis:
                    activityEmis[emfacInd] = {"alob": {}, "var": {}}
                for varInd, varVal in emis["VARLIST"]:
                    #vars should also be indexed
                    activityEmis[emfacInd]["var"][varInd] = None
                for alob in emis.ALOBOrder:
                    activityEmis[emfacInd]["alob"][alob] = None

        #Writing header
        header0 = ()
        header = ()
        srcAlobInd = {}

        for parName in src.parOrder:
            header += (parName, )
        header0 += ("Static parameters", )
        header0 += (len(header) - len(header0)) * ("", )
        alobKeys = srcAlobs.keys()
        alobKeys.sort()
        for alobKey in alobKeys:
            header += (alobKey, )
        if src["ALOB"] > 0:
            header0 += ("ALOBs", )
            header0 += (len(header) - len(header0)) * ("", )

        for substInd in substEmis:
            substName = self.subdb.substNames[substInd]
            header += ("Emission", "Time variation", "Unit", "Macro",
                       "Activity code")
            header0 += ("Substance:", substName)
            header0 += (len(header) - len(header0)) * ("", )
            alobKeys = substEmis[substInd]["alob"].keys()
            alobKeys.sort()
            for alobKey in alobKeys:
                row += [src.ALOB.get(alobKey, "")]

            for alob in alobKeys:
                header += (alob, )
            if len(alobKeys) > 0:
                header0 += ("ALOBs", )
                header0 += (len(header) - len(header0)) * ("", )

        for subgrpInd in subgrpEmis:
            subgrp = self.subgrpdb.subgrps[subgrpInd]
            header += ("Activity", "Time variation", "Unit", "Activity code")
            header0 += ("Substance group:", subgrp.name)
            header0 += (len(header) - len(header0)) * ("", )

            alobKeys = subgrpEmis[subgrpInd]["alob"].keys()
            alobKeys.sort()
            for alobKey in alobKeys:
                header += (alobKey, )
            if subgrpEmis[subgrpInd]["alob"] > 0:
                header0 += ("ALOBs", )
                header0 += (len(header) - len(header0)) * ("", )

        for emfacInd in activityEmis:
            emfac = self.emfacdb[emfacInd]
            header += ("Time variation", )
            for varInd, var in emfac.vars.items():
                header += (var.name, )
            header0 += ("Emfac:", emfac.name)
            header0 += (len(header) - len(header0)) * ("", )

            header += ("Activity code", )
            alobKeys = activityEmis[emfacInd]["alob"].keys()
            alobKeys.sort()
            for alobKey in alobKeys:
                header += (alobKey, )
            if len(alobKeys):
                header0 += ("ALOBs", )
                header0 += (len(header) - len(header0)) * ("", )
        header0 += (len(header) - len(header0)) * ("", )

        firstCol = 0
        for colInd, val in enumerate(header0[1:]):
            if val != "":
                bottomCellRange = self.sheets[
                    "sources"].getCellRangeByPosition(firstCol, 1, colInd - 2,
                                                      1)

                bottomBorder = bottomCellRange.BottomBorder
                bottomBorder.OuterLineWidth = 30
                bottomCellRange.BottomBorder = bottomBorder
                firstCol = colInd - 2

        out = [header0, header]
        for src in sourcedb.sources:
            row = []
            for par in src.parOrder:
                row += [unicode(src[par])]

            #Write alobs for sources
            alobKeys = srcAlobs.keys()
            alobKeys.sort()
            for alobKey in alobKeys:
                row += [src.ALOB.get(alobKey, "")]

            #write substance emissions with alobs
            for substInd in substEmis:
                alobKeys = substEmis[substInd]["alob"].keys()
                alobKeys.sort()
                if substInd in src.subst_emis:
                    emis = src.subst_emis[substInd]
                    row += [
                        emis["EMISSION"], emis["TIMEVAR"], emis["UNIT"],
                        emis["MACRO"], emis["ACTCODE"]
                    ]
                    for alobKey in alobKeys:
                        row += [emis.ALOB.get(alobKey, "")]
                else:
                    row += ["", "", "", "", ""]  #empty cells for substance
                    row += [""] * len(alobKeys)

            #write substance group emissions with alobs
            for subgrpInd in subgrpEmis:
                alobKeys = subgrpEmis[subgrpInd]["alob"].keys()
                alobKeys.sort()
                if subgrpInd in src.subst_emis:
                    emis = src.subgrp_emis[subgrpInd]
                    row += [
                        emis["ACTIVITY"], emis["TIMEVAR"], emis["UNIT"],
                        emis["ACTCODE"]
                    ]
                    for alobKey in alobKeys:
                        row += [emis.ALOB.get(alobKey, "")]
                else:
                    row += ["", "", "", ""]  #empty cells for substance group
                    row += [""] * len(alobKeys)

            #write emfac emissions with variables and alobs
            for emfacInd in activityEmis:
                alobKeys = activityEmis[emfacInd]["alob"].keys()
                alobKeys.sort()
                varKeys = activityEmis[emfacInd]["var"].keys()
                varKeys.sort()
                if emfacInd in src.activity_emis:
                    emis = src.activity_emis[emfacInd]
                    row += [emis["TIMEVAR"]]
                    varVals = [var[1] for var in emis["VARLIST"]]
                    row += varVals
                    row += [emis["ACTCODE"]]
                    for alobKey in alobKeys:
                        row += [emis.ALOB.get(alobKey, "")]
                else:
                    row += 2 * [""] + [""] * len(varKeys) + [""
                                                             ] * len(alobKeys)
            out.append(tuple(row))
        cellRange = self.sheets["sources"].getCellRangeByPosition(
            0, 0,
            len(header) - 1,
            len(out) - 1)
        cellRange.setDataArray(tuple(out))

    def trigger(self, args=''):
        """Called by addon's UI controls or service:URL"""
        self.createProgressDlg()
        self.setEdb("shipair", "sjov", "BS_2011_e1")
        self.updateProgressDlg("Loading edb: authenticating", "")
        self.login("www.shipair.smhi.se", "shipair", "airviro", "dummypw")
        self.updateProgressDlg("Loading substance list and searchkeys", "")
        self.loadSubdb()
        print "Loaded subdb"
        self.updateProgressDlg("Loading substance groups", "")
        self.loadSubgrpdb()
        print "Loaded subgrpdb"
        self.updateProgressDlg("Loading emission factors", "")
        self.loadEmfacdb()
        print "Loaded emfacdb"
        self.updateProgressDlg("Loading point and area sources", "")
        self.loadSources()
        self.updateProgressDlg("Edb loaded successfully!", "")
        sleep(1)
        print "Loaded sources"
        self.progressContainer.dispose()

    def createProgressDlg(self):
        parentwin = self.doc.CurrentController.Frame.ContainerWindow
        dialogModel = self.ctx.ServiceManager.createInstanceWithContext(
            'com.sun.star.awt.UnoControlDialogModel', self.ctx)
        FramePosSize = self.doc.CurrentController.Frame.ContainerWindow.PosSize
        WindowWidth = FramePosSize.Width
        dialogModel.Width = 200
        dialogModel.Height = 100
        dialogModel.PositionX = (WindowWidth / 2.2) - 105
        dialogModel.PositionY = 30
        dialogModel.Title = 'Loading sources'

        statusTxtModel = addControl(
            'com.sun.star.awt.UnoControlFixedTextModel', dialogModel, 6, 2,
            190, 20, 'Initializing', 'statusLabel')

        counterTxtModel = addControl(
            'com.sun.star.awt.UnoControlFixedTextModel', dialogModel, 6, 30,
            190, 50, '0', 'counterLabel')

        self.progressContainer = self.ctx.ServiceManager.createInstanceWithContext(
            'com.sun.star.awt.UnoControlDialog', self.ctx)

        self.progressContainer.setModel(dialogModel)
        self.progressContainer.setVisible(True)

        self.statusControl = self.progressContainer.getControl(
            'statusLabel').getModel()
        self.counterControl = self.progressContainer.getControl(
            'counterLabel').getModel()

    def updateProgressDlg(self, statusStr, counterStr):
        self.statusControl.Label = statusStr
        self.counterControl.Label = counterStr
Esempio n. 7
0
def main():
    #setting up parser
    parser = argparse.ArgumentParser(description=__doc__)
    utils.add_standard_command_options(parser)

    parser.add_argument(
        "-e","--edbs",
        action="store",dest="edbList",
        help="List of 'user/edb' pairs separated by :"
    )

    parser.add_argument(
        "-L","--labels",
        action="store",
        dest="labels",
        help="List of edb labels separated by :"
    )

    parser.add_argument(
        "-s","--substances",
        action="store",dest="substances",
        help="List of substance names separated by :"
    )
        
    parser.add_argument(
        "-t","--title",
        action="store",dest="title",
        help="Report title"
    )
    
    parser.add_argument(
        "-g","--gc-filter",
        action="store",dest="gcfilter",
        help="Filter on Geo codes, separated by :"
    )
    parser.add_argument(
        "-o","--outfile",
        action="store",dest="outfile",
        help="Output filename"
    )
    
    parser.add_argument(
        "-f","--format",
        action="store",dest="format",
        help="Output in 'excel','csv' or 'raw' " +
        "(Excel-format requires xlwt python module)"
    )
    
    parser.add_argument("--substMapping",
                      action="store",dest="substMapping",
                      help="File with tab separated mappings of substance names")

    parser.add_argument("--markerTable",
                      action="store",dest="markerTable",
                      help="Table of codes to be formatted and commented")

    parser.add_argument(
        "macro",metavar="MACRO",
        help="A macro to use"
    )

    args = parser.parse_args()

    if args.markerTable is not None:
        keys=["Year","GC","AC","note_1","note_2"]
        markerTable = DataTable(keys=keys,desc=[{"id":"Year","type":str},{"id":"GC","type":str},{"id":"AC","type":str},{"id":"note_1","type":str},{"id":"note_2","type":str}])
        markerTable.read(args.markerTable)
    else:
        markerTable=None
        
    substMapping={}
    if args.substMapping is not None:
        with codecs.open(args.substMapping,encoding="HP Roman8",mode="r") as f:
            for line in f:
                oldName,newName = line.split(":")
                substMapping[oldName.strip()]=newName.strip()

    dmn = Domain()
    if args.gcfilter is not None:
        args.gcfilter = args.gcfilter.split(":")

    # Read original macro
    with codecs.open(args.macro, encoding="HP Roman8", mode="r") as f:
        originalContent = f.read()
    
    # Create a tmp copy of the macro, write content from the original macro 
    macroTempFile = tempfile.NamedTemporaryFile(
        suffix=".sedb",
        dir=dmn.tmpDir()
    )
    tmpMacro = codecs.open(
        macroTempFile.name,
        encoding="HP Roman8",mode="w"
    )     
    tmpMacro.write(originalContent)
    tmpMacro.flush()

    # Create a ControlFile obj to simplify reading and modifying macro
    macro = ControlFile(macroTempFile.name, removeComments=False)
    ebd = macro.findString("edb.edb:")
    user = macro.findString("edb.user:"******"edb.reportgeocode:")[-1])
    acIndex = int(macro.findString("edb.reportactcode:")[-1])

    if args.edbList is None:
        ebds = [[user, edb]]
    else:
        edbs = args.edbList.split(":")
        edbs = [e.split("/") for e in edbs]

    nedbs = len(edbs)

    if args.labels is None:
        labels = ["No label"] * len(edbs)
    else:
        labels = args.labels.split(":")
        if len(labels) != nedbs:
            log.error("Number of labels specified should match number of edb:s")
            sys.exit(1)

    if args.substances is None:
        log.error("Need to specify substances")
        sys.exit(1)
    else:
        substances = args.substances.split(":")

    if args.format not in ('excel','csv','raw'):
        log.error(
            "Invalid format specifier : %s, should be one of 'excel'" +
            ", 'csv' or 'raw'" %args.format
        )
        sys.exit(1)
    elif args.format == "excel":
        try:
            import xlwt
        except:
            log.error(
                "trendReport.py requires python module xlwt to write excel-files")
            sys.exit(1)

    # first edb
#     import pdb; pdb.set_trace()
    edb = Edb(dmn, edbs[0][0], edbs[0][1])    
    # assume same code definitions in all edbs to be processed, read from first
    rsrc = edb.rsrc
    
    nrsubstances = len(substances)
    unitIndex = int(macro.findString("UNIT        :"))
    units = rsrc.search[unitIndex]    

    subdb = Subdb(edb)
    subdb.read()    
    
    #decode input title using stdin encoding
    title=args.title.decode(sys.stdin.encoding)

    rawOutput = ""
    rawMeta = u"name: %s\nnrmacros: %i\nnrsub: %i\nunit: %s\n" %(
        title, nedbs, nrsubstances, units)
        
    emissions = []
    for ind, edbUser in enumerate(edbs):
        label = labels[ind]
        userName = edbUser[0]
        edbName = edbUser[1]

        macro.setParam("edb.user:"******"edb.edb:", edbName)
        macro.setParam("USER          :"******"EDB           :", edbName)

        rawMeta += "macro.%i.edbuser: %s\n" %(ind, userName)
        rawMeta += "macro.%i.edbname: %s\n" %(ind, edbName)
        rawMeta += "macro.%i.desc: %s\n" %(ind, label)

        for subst in substances:
            log.info(
                "User: %s, edb: %s, substance %s" %(
                    userName, edbName, subst)
            )
            substanceIndex = subdb.substIndex(subst)
            macro.setParam("ELEMENT    :", substanceIndex)
            macro.write()
            command = "xrepedb -i " + macro.name
            log.info("Running xrepedb for substance %s" % subst)
#             import pdb; pdb.set_trace()
            (returnCode, errMsg, outMsg) = utilities.execute(command)          
 
            if returnCode != 0:
                log.error("Could not run %s\nstdout: %s\nstderr:%s" %(
                        command,outMsg,errMsg))
                sys.exit(1)
            
            if len(outMsg) < 10:
                log.error("Invalid output from xrepedb: %s" % outMsg)
                sys.exit(1)

            rawOutput += "#MACRO %i \"%s\" \"%s\"\n" % (ind, subst, labels[ind])
            rawOutput += outMsg

            lines = outMsg.split("\n")[:-1]
            for lineInd, line in enumerate(lines):
                vals = line.split()
                ac = vals[1].split(".")
                gc = vals[3].split(".")
                
                if len(ac) == 1:
                    if ac[0] == "<all>":
                        acLev1 = "alla"
                    else:
                        acLev1 = ac[0]
                    acLev2 = "alla"
                else:
                    acLev1 = ac[0]
                    acLev2 = ac[1]
                    
                if len(gc) == 1:
                    if gc[0] == "<all>":
                        gcLev1 = "alla"
                    else:
                        gcLev1 = gc[0]
                    gcLev2 = "alla"
                else:
                    gcLev1 = gc[0]
                    gcLev2 = gc[1]

                emis = float(vals[4])


                if acLev1 == "alla":
                    acLev1Name = "alla"
                    acLev2Name = "alla"
                else:
                    node = rsrc.ac[acIndex - 1].root.find(acLev1)
                    acLev1Name = node.attrib["name"]
                    if acLev2 == "alla":
                        acLev2Name = "alla"
                    else:
                        node = rsrc.ac[acIndex-1].root.find(
                            acLev1 + "/" + acLev2
                        )
                        acLev2Name = node.attrib["name"]                


                if gcLev1 == "alla":
                    gcLev1Name = "alla"
                    gcLev2Name = "alla"
                else:
                    node = rsrc.gc[gcIndex-1].root.find(gcLev1)
                    gcLev1Name = node.attrib["name"]
                    if gcLev2 == "alla":
                        gcLev2Name = "alla"
                    else:
                        node = rsrc.gc[gcIndex - 1].root.find(
                            gcLev1 + "/" + gcLev2
                        )
                        gcLev2Name = node.attrib["name"]                


                if args.gcfilter is not None:
                    if gc[0] not in args.gcfilter:
#                     if args.gcfilter != gcLev1:
                        continue
                emissions.append({"label": label,
                                  "substance": subst,
                                  "ac": '.'.join(ac),
                                  "gc": '.'.join(gc),
                                  "gcLev1": gcLev1Name,
                                  "gcLev2": gcLev2Name,
                                  "acLev1": acLev1Name,
                                  "acLev2": acLev2Name,
                                  "acLev1Code": acLev1,
                                  "acLev2Code": acLev2,
                                  "val": emis,
                                  "edbIndex": ind})


    
    #Close tempfile to automatically remove it
    tmpMacro.close()

    if args.format == "raw":
        outfile = codecs.open(args.outfile,"w","HP Roman8")
        outfile.write(rawMeta)
        outfile.write(rawOutput)
        outfile.close()
    elif args.format == "csv":
        outfile = open(args.outfile,"w")
        desc = [
            {'id': 'gc', 'type': unicode},
            {'id': 'ac', 'type': unicode},
            {'id': 'label', 'type': unicode},
            {'id': 'user', 'type': unicode},
            {'id': 'edb', 'type': unicode}
            ]
        for subst in substances:
            desc.append({'id': subst, 'type': float})

        keys = ['gc', 'ac', 'label']
    
        table = DataTable(desc=desc, keys=keys)

        log.info("Adding emissions to csv-table")
        for emis in emissions:
            row = [None] * len(desc)
            user = edbs[emis['edbIndex']][0]
            edb = edbs[emis['edbIndex']][1]
            row[table.colIndex['gc']] = emis['gc']
            row[table.colIndex['ac']] = emis['ac']
            row[table.colIndex['label']] = emis['label']
            row[table.colIndex['user']] = user
            row[table.colIndex['edb']] = edb
            row[table.colIndex[emis['substance']]] = emis['val']

            # data is appended to the correct row, or a new row is added if the
            # table keys do not match any existing row
            log.debug(
                "Adding row for substance %s, gc %s, ac %s" %(
                    emis['substance'],
                    emis['gc'],
                    emis['ac'])
            )
            table.addRow(row, append=True)

        table.write(outfile)
        outfile.close()

    else:
        # Create style objects for excel output        
        header1Style = xlwt.easyxf(
            'font: name Times New Roman,color-index black, bold on',
            num_format_str='0.000E+00'
        )

        markerStyle1 = xlwt.easyxf(
            'font: name Times New Roman,color-index red, bold off, italic on',
            num_format_str='0.000E+00')

        markerStyle2 = xlwt.easyxf(
            'font: name Times New Roman,color-index orange, bold off, italic on',
            num_format_str='0.000E+00')

        normalStyle = xlwt.easyxf(
            'font: name Times New Roman,color-index black, bold off',
            num_format_str='0.000E+00'
        )                       

        excelBook = xlwt.Workbook()

        # Creating info sheet
        infoWs = excelBook.add_sheet("Info")
        infoWs.col(0).width = 256*20
        infoWs.col(1).width = 256*25
        infoWs.col(2).width = 256*20
        infoWs.col(3).width = 256*200

        infoWs.write(0,0,u"Rapportnamn:",header1Style)
        infoWs.write(0,1,title,header1Style)
        infoWs.write(1,0,u"Beskrivning av dataunderlaget",header1Style)
        infoWs.write(3,0,u"Makron (specificerar utsökningar ur databasen)",header1Style)
        infoWs.write(4,0,u"Etikett",header1Style)
        infoWs.write(4,1,u"Ägare till EDB",header1Style)
        infoWs.write(4,2,u"EDB (emissiondatabas)",header1Style)
        infoWs.write(4,3,u"Beskrivning",header1Style)

        for i,edbUser in enumerate(edbs):
            userName=edbUser[0]
            edbName=edbUser[1]
            label=labels[i]
            infoWs.write(5+i,0,label)
            infoWs.write(5+i,1,userName)
            infoWs.write(5+i,2,edbName)
            #reading edb description file (if it exists)
            edb=Edb(dmn,userName,edbName)
            infoWs.write(5+i,3,edb.desc().replace("\n"," "))

        #split substances in green house gases and air quality related
        ghgList=[s for s in substances if s in ghgs]        
        aqList=[s for s in substances if s not in ghgs]

        #Write air quality headers
        firstRow=4
        #Add two rows for marker comments
        if markerTable is not None:
            firstRow+=2
        if len(aqList)>0:
            aqWs = excelBook.add_sheet(u"Luftföroreningar")
            aqWs.col(0).width = 256*25
            aqWs.col(1).width = 256*30
            aqWs.col(2).width = 256*20
            aqWs.col(3).width = 256*15
            for col in range(nrsubstances*nedbs):
                aqWs.col(col+4).width=256*15

            aqWs.write(0,0,u"Rapportnamn:",header1Style)
            aqWs.write(0,1,title,header1Style)
            aqWs.write(1,0,u"Emissioner av luftföroreningar",header1Style)
            aqWs.write(1,1,u"Enhet: "+units,header1Style)
            if markerTable is not None:
                aqWs.write(2,0,u"OBS! Röd kursiv text anger osäkra värden p.g.a. att en stor del av emissionen är fördelad med schabloner inom kommungruppen. Granska underkategorin \"Energiförsörjning via el-värmeverk samt inom industrin\" för att se eventuella misstänkta värden.",markerStyle1)
                aqWs.write(3,0,u"OBS! Orange kursiv text anger osäkra värden p.g.a. att trenden varierar kraftigt och eventuellt felaktigt, ytterligare verifiering krävs. Granska underkategorin \"Energiförsörjning via el-värmeverk samt inom industrin\" för att se eventuella misstänkta värden.",markerStyle2)

            aqWs.write(firstRow,0,"Huvudsektor",header1Style)
            aqWs.write(firstRow,1,"Undersektor",header1Style)
            aqWs.write(firstRow,2,u"Län",header1Style)
            aqWs.write(firstRow,3,"Kommun",header1Style)

        #Write ghg headers
        if len(ghgList)>0:
            ghgWs = excelBook.add_sheet(u"Växthusgaser")
            ghgWs.col(0).width = 256*25
            ghgWs.col(1).width = 256*30
            ghgWs.col(2).width = 256*20
            ghgWs.col(3).width = 256*15
            for col in range(nrsubstances*nedbs):
                ghgWs.col(col+4).width=256*15

            ghgWs.write(0,0,u"Rapportnamn:",header1Style)
            ghgWs.write(0,1,title,header1Style)
            ghgWs.write(1,0,u"Emissioner av Växthusgaser",header1Style)
            ghgWs.write(2,0,u"CO2-ekv. efter ämnesnamn innebär att emissionen är uttryckt i CO2-ekvivalenter",header1Style)
            if markerTable is not None:
                ghgWs.write(3,0,u"OBS! Röd kursiv text anger osäkra värden p.g.a. att en stor del av emissionen är fördelad med schabloner inom kommungruppen.  Granska underkategorin \"Energiförsörjning via el-värmeverk samt inom industrin\" för att se eventuella misstänkta värden.",markerStyle1)
                ghgWs.write(4,0,u"OBS! Orange kursiv text anger osäkra värden p.g.a. att trenden varierar kraftigt och eventuellt felaktigt, ytterligare verifiering krävs.  Granska underkategorin \"Energiförsörjning via el-värmeverk samt inom industrin\" för att se eventuella misstänkta värden.",markerStyle2)

            ghgWs.write(1,1,u"Enhet: "+units,header1Style)
            ghgWs.write(firstRow,0,"Huvudsektor",header1Style)
            ghgWs.write(firstRow,1,"Undersektor",header1Style)
            ghgWs.write(firstRow,2,u"Län",header1Style)
            ghgWs.write(firstRow,3,"Kommun",header1Style)

        def getColInd(nmacros, substances,macroInd,subst):
            #gets the column index in excel file
            sInd=substances.index(subst)

            #Including extra columns to write CO2-equivalents
            nSubstWithCO2equivalents=0
            for s in substances[:sInd+1]:
                if s in doubleColumns:
                    nSubstWithCO2equivalents+=1                       

            return 4 + macroInd+sInd*nmacros+nSubstWithCO2equivalents*(macroInd+1)

        #write macro labels and substance headers for air quality sheet
        for sInd,subst in enumerate(aqList):
            for i,edbUser in enumerate(edbs):
                col=getColInd(nedbs,aqList,i,subst)
                aqWs.write(firstRow-1,col,labels[i],header1Style)
                #If a substance name is given in mapping this is used, otherwise
                #The substance bname from the airviro substance list is used
                aqWs.write(firstRow,col,substMapping.get(subst,subst),header1Style)

        #write macro labels and substance headers for ghg sheet
        for sInd,subst in enumerate(ghgList):
            for i,edbUser in enumerate(edbs):
                col=getColInd(nedbs,ghgList,i,subst)

                #If CO2-equivalents are calculated, an extra column is needed
                if subst in doubleColumns:
                    ghgWs.write(firstRow-1,col-1,labels[i],header1Style)
                ghgWs.write(firstRow-1,col,labels[i],header1Style)

                #If CO2-equivalents are calculated, an extra column is needed
                if subst in doubleColumns:
                    #debug statement
                    #print "writing subst %s in col %i and %i" %(subst,col-1,col) 
                    ghgWs.write(firstRow,col-1,substMapping.get(subst,subst),header1Style)
                    ghgWs.write(firstRow,col,substMapping.get(subst,subst)+"CO2-ekv.",header1Style)
                elif subst in storedAsCO2equivalents:
                    #debug statement
                    #print "writing subst %s in col %i" %(subst,col) 
                    ghgWs.write(firstRow,col,substMapping.get(subst,subst)+"CO2-ekv.",header1Style)
                else:
                    #debug statement
                    #print "writing subst %s in col %i" %(subst,col) 
                    ghgWs.write(firstRow,col,substMapping.get(subst,subst),header1Style)


        #looping over all emissions, writing them to the correct column and row
        ghgRow=[]
        aqRow=[]
        for m in range(nedbs*nrsubstances+4+3*nedbs):
            ghgRow.append(firstRow+1)
        for m in range(nedbs*nrsubstances+4):
            aqRow.append(firstRow+1)

        for emis in emissions:
            subst = emis["substance"]
            emisVal=emis["val"]
            edbInd=emis["edbIndex"]

            #Check if gc, ac and year can be found in the error list
            #debugging marker style
            if markerTable is not None:
                TableRowInd=markerTable.rowIndices([labels[edbInd],
                                                    emis["gc"],
                                                    emis["ac"],
                                                    "ja","*"])
                if len(TableRowInd) >0:
                    valueStyle=markerStyle1
                else:
                    TableRowInd=markerTable.rowIndices([labels[edbInd],
                                                        emis["gc"],
                                                        emis["ac"],
                                                        "*","ja"])
                    if len(TableRowInd)>0:
                        valueStyle=markerStyle2
                    else:
                        valueStyle=normalStyle
            else:
                valueStyle=normalStyle



            if subst in ghgList:
                col=getColInd(nedbs,ghgList,edbInd,subst)
                row=ghgRow[col]
                if ghgRow[0]<=+row:
                    ghgWs.write(row,0,emis["acLev1"],normalStyle)
                    ghgWs.write(row,1,emis["acLev2"],normalStyle)
                    ghgWs.write(row,2,emis["gcLev1"],normalStyle)
                    ghgWs.write(row,3,emis["gcLev2"],normalStyle)
                    ghgRow[0]+=1
                    #converts the emission to CO2-ekquivalents
                if subst in doubleColumns:
                    ghgWs.write(row,col-1,float(emisVal),valueStyle)
                    ghgWs.write(row,col,float(emisVal)*float(ekvFactors[subst]),valueStyle)
                else:
                    ghgWs.write(row,col,float(emisVal),valueStyle)

                ghgRow[col]+=1
            else:
                col=getColInd(nedbs,aqList,edbInd,subst)
                row=aqRow[col]
                if aqRow[0]<=+row:
                    aqWs.write(row,0,emis["acLev1"],normalStyle)
                    aqWs.write(row,1,emis["acLev2"],normalStyle)
                    aqWs.write(row,2,emis["gcLev1"],normalStyle)
                    aqWs.write(row,3,emis["gcLev2"],normalStyle)
                    aqRow[0]+=1
                aqWs.write(row,col,float(emisVal),valueStyle)
                aqRow[col]+=1

        excelBook.save(args.outfile)
    log.info("Finished!")
Esempio n. 8
0
def main():
    #-----------Setting up and unsing option parser-----------------------
    parser=OptionParser(usage= usage, version=version)
    
    parser.add_option("-u",'--user',
                      action="store",dest="user",
                      help="Name of target edb user")

    parser.add_option("-e","--edb",
                      action="store",dest="edb",
                      help="Name of target edb")

    parser.add_option("-v","--viewports",
                      action="store",dest="viewports",
                      help="Comma-separated list of area id's to be cut out, default is all")

    parser.add_option("-y","--year",
                      action="store",dest="year",
                      help="Cut out for given year")
    
    parser.add_option("-l", "--loglevel",
                      action="store",dest="loglevel",default=2,
                      help="Sets the loglevel (0-3 where 3=full logging)")

    parser.add_option("-s","--suffix",
                      action="store",dest="suffix",default="v1",
                      help="Sets suffix to names of generated edb's to support version management, default is 'v1'")

    (options, args) = parser.parse_args()


    
    #--------------------Init logger-----------------------
    rootLogger = logger.RootLogger(level=options.loglevel)
    global log
    log = rootLogger.getLogger(sys.argv[0])

    #-----------------Validating options-------------------

    if options.user is None:
        log.error("Need to specify -u <user>")
        return 1
    if options.edb is None:
        log.error("Need to specify -e <edb>")
        return 1
    if options.year is None:
        log.error("Need to specify -y <year>")
        return 1
    if len(options.suffix)>4:
        log.error("Limit your suffix length to 4 characters")
        return 1

    if len(options.year)!=4:
        log.error("Year should be given with four digits")
        return 1

    dmn=Domain()
    viewports=[]
    if options.viewports is not None:        
        viewportIds=options.viewports.split(",")
    else:
        viewportIds=dmn.listViewports()
    for vpId in viewportIds:
        vp=ViewPort()
        vp.read(path.join(dmn.wndPath(),"modell.par"),vpId)
        viewports.append(vp)
    
    edb=Edb(dmn,options.user,options.edb)

    log.info("Reading sourcedb...")
    sourcedb=Sourcedb(edb)
    sourcedb.read()

    log.info("Reading emfacdb...")
    emfacdb=Emfacdb(edb)
    emfacdb.read()

    log.info("Reading subdb...")
    subdb=Subdb(edb)
    subdb.read()
    
    edbDotRsrc=edb.rsrcPath()
    
    for vpInd,vp in enumerate(viewports):        
        targetEdbName=vp.code+"_"+options.year+"_"+options.suffix     
        tEdb=Edb(dmn,options.user,targetEdbName)
        if tEdb.exists():
            log.info("Edb %s already exists, remove first to update" %targetEdbName)
            continue
        tEdb.create(edbRsrc=edbDotRsrc)
        log.info("Created empty edb %s" %targetEdbName)

        subdb.setEdb(tEdb)
        subdb.write()
        log.info("Wrote searchkeys")

        emfacdb.setEdb(tEdb)        
        emfacdb.write()
        log.info("Wrote emfacdb")
        
        tSourcedb=Sourcedb(tEdb)        
        
        log.info("Cutting out viewport %s (%i/%i)" %(vp.code,vpInd+1,len(viewports)))
        for srcInd,src in enumerate(sourcedb.sources):
            if includeShip(src,vp.code,src["Y1"],options.year):
                log.debug("Ship %i/%i included in %s" %(srcInd+1,len(sourcedb.sources),tEdb.name))
                tSourcedb.sources.append(src)
        tSourcedb.write()
        log.info("Wrote exatracted sources to %s" %tEdb.name)
        tEdb.setDesc("This edb has been extracted from %s under user %s, " %(edb.name,edb.user)+
                            "and includes all ships that have visited the map area %s (%s) during %s\n" %(vp.code,vp.name,options.year))
    log.info("Finished!")
    return 0
Esempio n. 9
0
class LoadEdb(XJobExecutor,unohelper.Base):
    """
    Load an Airviro edb into a number of spreadsheets
    """
    def __init__(self,ctx):
        self.ctx = ctx
        self.desktop=self.ctx.ServiceManager.createInstanceWithContext(
            "com.sun.star.frame.Desktop", self.ctx )
        self.doc=self.desktop.getCurrentComponent()
        self.sheets={"sources":None,"substance groups":None,
                     "emfac":None,"substances":None, "units":None}
        self.edb=None
        self.subdb=None
        self.subgrpdb=None
        self.host=None
        self.auth=None
        self.user=None
        self.edb=None
        self.domain=None

    def login(self,host,domain,user,pw):
        if "http://" not in host:
            host="http://"+host
                    
        #todo: get authenticator via https        
        self.auth ="gmX=QxTLA3Cz3=9aacZk0k9Zae_FW8Kznq+9B_7_i3i0"
        self.domain=domain
        self.user=user
        self.host=host

    def setEdb(self,domainName,userName,edbName):
        self.edb=Edb(domainName,userName,edbName)

    def getPage(self,argList):
        req = "%s/cgi-bin/iairviro/do.cgi?%s&loAirviro.cgi&%s"%(self.host,
                                                                self.auth,
                                                                "&".join(argList))
        page = urllib2.urlopen(req)
        return page
        
    def loadSubdb(self):
        self.sheets["substances"] = self.createSheet("substances")
        self.subdb=Subdb(self.edb)
        page=self.getPage(["read",self.domain,self.edb.user,self.edb.name,
                           "subdb_0"])
        
#        self.subdb.readSubstances(
#            filename="/local_disk/dvlp/airviro/loairviro/test/substances.out",
#            keepEmpty=True)
        self.subdb.readSubstances(fileObject=page,keepEmpty=True)
        out=(("Index","Substance name"),)
        indices=sorted(self.subdb.substNames.keys())
        for i,ind in enumerate(indices):
            substName=self.subdb.substNames[ind]
            out+=((ind,substName),)

        cellRange=self.sheets[
            "substances"].getCellRangeByPosition(0,0,1,len(out)-1)
        cellRange.setDataArray(out)

    def loadSubgrpdb(self):
        self.sheets["substance groups"] = self.createSheet("substance groups")
        self.subgrpdb=Subgrpdb(self.edb)      
        page=self.getPage(["read",self.domain,self.edb.user,self.edb.name,
                           "subgrpdb"])
        self.subgrpdb.read(fileObject=page)
#            filename="/local_disk/dvlp/airviro/loairviro/test/subgrp.out")
        
        substances=[]
        for subgrpInd,subgrp in self.subgrpdb.subgrps.items():
            for subst in subgrp.substances:
                substName=self.subdb.substNames[subst]
                if substName not in substances:
                    substances.append(substName)

        header1=("","")
        header2=("Index","Name")
        for substName in substances:
            header1+=(substName,"","")
            header2+=("Slope","Offset","Unit")

        out=(header1,header2)
        for subgrpInd,subgrp in self.subgrpdb.subgrps.items():
            #list names of substances in subgrp
            substInSubgrp=[self.subdb[s] for s in subgrp.substances]
            row=(subgrp.index,subgrp.name)
            for substName in substances:
                if substName in substInSubgrp:
                    substIndex=self.subdb.substIndices[substName]
                    slope=subgrp.substances[substIndex]["slope"]
                    offset=subgrp.substances[substIndex]["offset"]
                    unit=subgrp.substances[substIndex]["unit"]
                else:
                    slope=""
                    offset=""
                    unit=""
                row+=(slope,offset,unit)
            out+=(row,)
                    
        cellRange=self.sheets[
            "substance groups"].getCellRangeByPosition(0,0,
                                                       len(header1)-1,len(out)-1)
        cellRange.setDataArray(out)

    def loadEmfacdb(self):
        self.sheets["emission factors"] = self.createSheet("emission factors")
        self.emfacdb=Emfacdb(self.edb)
        page=self.getPage(["read",self.domain,self.edb.user,self.edb.name,
                           "emfacdb"])
        self.emfacdb.read(fileObject=page)
#            filename="/local_disk/dvlp/airviro/loairviro/test/emfac.out")
        nvars=[len(emfac.vars) for emfac in self.emfacdb.activities.values()]
        nvars=max(nvars)

        firstRow=0
        for emfacInd,emfac in self.emfacdb.activities.items():
            out=[]
            out.append(("Index:",emfacInd))
            out.append(("Name:",emfac.name))
            out.append(("Substance:",self.subdb[emfac.subst]))
            varIndices=[]
            varNames=[]
            varTypes=[]
            formula=emfac.formula
            for i in range(1,len(emfac.vars)+1):
                formula.replace("X%i" %i,emfac.vars[i].name)
                varIndices.append(str(i))
                varNames.append(emfac.vars[i].name)
                varTypes.append(emfac.vars[i].type)
            out.append(("Formula",formula))
            out.append(("Variable index:",)+tuple(varIndices))
            out.append(("Variable names:",)+tuple(varNames))
            out.append(("Variable types:",)+tuple(varTypes))
            out.append(("",))
            out.append(("",))

            lastRow=firstRow+len(out)-1
            lastCol=len(varIndices)

            #Make so all rows have the same length
            #Needed to use setDataArray
            for i in range(len(out)):
                completeRow=("",)*(lastCol-(len(out[i])-1))
                out[i]+=completeRow

            cellRange=self.sheets[
                "emission factors"].getCellRangeByPosition(0,firstRow,
                                                           lastCol,lastRow)
            firstRow=lastRow+1
            cellRange.setDataArray(tuple(out))
        
                
    def createSheet(self,name):
        try:
            sheets = self.doc.getSheets()
        except Exception:
            raise TypeError("Model retrived was not a spreadsheet")

        #TODO: warning dialogue before removing sheet
        if sheets.hasByName(name):
            sheets.removeByName(name)
            
        pos = sheets.getCount()
        sheets.insertNewByName(name, pos)
        return sheets.getByIndex(pos)
        
    def loadSources(self):        
        self.sheets["sources"] = self.createSheet("sources")
        sourcedb=Sourcedb(self.edb)

        page=self.getPage(["read",self.domain,self.edb.user,self.edb.name,
                           "sourcedb"])
        #filename="/local_disk/dvlp/airviro/loairviro/test/TR_ships.out"
        
        substEmis={}
        substAlob={}
        subgrpEmis={}
        subgrpAlob={}
        activityEmis={}
        activityAlob={}
        srcAlobs={}

        #Reading sources
        batchInd=0
        while sourcedb.read(fileObject=page,accumulate=True,batchSize=1):
            self.updateProgressDlg(
                "Loading point and area sources","read batch %i" %batchInd)
            #print "Read batch %i" %batchInd
            batchInd+=1

        self.updateProgressDlg(
            "Loading point and area sources","writing sources to sheet")
        #To present sources in a table with a nice header, it is necessary
        #to list all substances, alobs, subgroups, emfacs and variables that are
        #used in the edb. This is because each alob, substance etc. should be
        #shown only once in the header
        for src in sourcedb.sources:
            #Accumulate all alobs into a list
            for alob in src.ALOBOrder:
                srcAlobs[alob]=None

            #store all substances and their alobs in a dict
            for substInd,emis in src.subst_emis:
                if substInd not in substEmis:
                    substEmis[substInd]={"alob":{}}
                for alob in emis.ALOBOrder:
                    substEmis[substInd]["alob"][alob]=None

            #store all substance groups and their alobs in a dict
            for subgrpInd,emis in src.subgrp_emis.items():
                if subgrpInd not in subgrpEmis:
                    subgrpEmis[subgrpInd]={"alob":{}}
                for alob in emis.ALOBOrder:
                    subgrpEmis[subgrpInd]["alob"][alob]=None

            #Accumulate all activities and included alobs
            for emfacInd,emis in src.activity_emis.items():
                if emfacInd not in activityEmis:
                    activityEmis[emfacInd]={"alob":{},"var":{}}
                for varInd,varVal in emis["VARLIST"]:
                    #vars should also be indexed
                    activityEmis[emfacInd]["var"][varInd]=None
                for alob in emis.ALOBOrder:
                    activityEmis[emfacInd]["alob"][alob]=None

        #Writing header
        header0=()
        header=()
        srcAlobInd={}

        for parName in src.parOrder:
            header+=(parName,)
        header0+=("Static parameters",)
        header0+=(len(header)-len(header0))*("",)
        alobKeys=srcAlobs.keys()
        alobKeys.sort()
        for alobKey in alobKeys:
            header+=(alobKey,)
        if src["ALOB"]>0:
            header0+=("ALOBs",)
            header0+=(len(header)-len(header0))*("",)

        for substInd in substEmis:
            substName=self.subdb.substNames[substInd]
            header+=("Emission","Time variation","Unit","Macro","Activity code")
            header0+=("Substance:",substName)
            header0+=(len(header)-len(header0))*("",)
            alobKeys=substEmis[substInd]["alob"].keys()
            alobKeys.sort()
            for alobKey in alobKeys:
                row+=[src.ALOB.get(alobKey,"")]

            for alob in alobKeys:
                header+=(alob,)
            if len(alobKeys)>0:
                header0+=("ALOBs",)
                header0+=(len(header)-len(header0))*("",)

        for subgrpInd in subgrpEmis:
            subgrp=self.subgrpdb.subgrps[subgrpInd]
            header+=("Activity","Time variation","Unit","Activity code")
            header0+=("Substance group:",subgrp.name)
            header0+=(len(header)-len(header0))*("",)

            alobKeys=subgrpEmis[subgrpInd]["alob"].keys()
            alobKeys.sort()
            for alobKey in alobKeys:
                header+=(alobKey,)
            if subgrpEmis[subgrpInd]["alob"]>0:
                header0+=("ALOBs",)
                header0+=(len(header)-len(header0))*("",)

                
        for emfacInd in activityEmis:
            emfac=self.emfacdb[emfacInd]
            header+=("Time variation",)
            for varInd,var in emfac.vars.items():
                header+=(var.name,)
            header0+=("Emfac:",emfac.name)
            header0+=(len(header)-len(header0))*("",)
                
            header+=("Activity code",)
            alobKeys=activityEmis[emfacInd]["alob"].keys()
            alobKeys.sort()
            for alobKey in alobKeys:
                header+=(alobKey,)
            if len(alobKeys):
                header0+=("ALOBs",)
                header0+=(len(header)-len(header0))*("",)
        header0+=(len(header)-len(header0))*("",)

        firstCol=0
        for colInd,val in enumerate(header0[1:]):
            if val !="":
                bottomCellRange=self.sheets[
                    "sources"].getCellRangeByPosition(firstCol,1,colInd-2,1)
                
                bottomBorder = bottomCellRange.BottomBorder
                bottomBorder.OuterLineWidth = 30
                bottomCellRange.BottomBorder = bottomBorder
                firstCol=colInd-2
                
        out=[header0,header]
        for src in sourcedb.sources:
            row=[]
            for par in src.parOrder:
                row+=[unicode(src[par])]

            #Write alobs for sources
            alobKeys=srcAlobs.keys()
            alobKeys.sort()
            for alobKey in alobKeys:
                row+=[src.ALOB.get(alobKey,"")]

            #write substance emissions with alobs
            for substInd in substEmis:
                alobKeys=substEmis[substInd]["alob"].keys()
                alobKeys.sort()
                if substInd in src.subst_emis:
                    emis=src.subst_emis[substInd]
                    row+=[emis["EMISSION"],
                          emis["TIMEVAR"],
                          emis["UNIT"],
                          emis["MACRO"],
                          emis["ACTCODE"]]
                    for alobKey in alobKeys:
                        row+=[emis.ALOB.get(alobKey,"")]
                else:
                    row+=["","","","",""] #empty cells for substance
                    row+=[""]*len(alobKeys)

            #write substance group emissions with alobs
            for subgrpInd in subgrpEmis:
                alobKeys=subgrpEmis[subgrpInd]["alob"].keys()
                alobKeys.sort()
                if subgrpInd in src.subst_emis:
                    emis=src.subgrp_emis[subgrpInd]
                    row+=[emis["ACTIVITY"],
                          emis["TIMEVAR"],
                          emis["UNIT"],
                          emis["ACTCODE"]]
                    for alobKey in alobKeys:
                        row+=[emis.ALOB.get(alobKey,"")]
                else:
                    row+=["","","",""] #empty cells for substance group
                    row+=[""]*len(alobKeys)

            #write emfac emissions with variables and alobs
            for emfacInd in activityEmis:
                alobKeys=activityEmis[emfacInd]["alob"].keys()
                alobKeys.sort()
                varKeys=activityEmis[emfacInd]["var"].keys()
                varKeys.sort()
                if emfacInd in src.activity_emis:
                    emis=src.activity_emis[emfacInd]
                    row+=[emis["TIMEVAR"]]
                    varVals = [var[1] for var in emis["VARLIST"]]
                    row+=varVals
                    row+=[emis["ACTCODE"]]
                    for alobKey in alobKeys:
                        row+=[emis.ALOB.get(alobKey,"")]
                else:
                    row+=2*[""]+[""]*len(varKeys)+[""]*len(alobKeys)
            out.append(tuple(row))
        cellRange=self.sheets[
            "sources"].getCellRangeByPosition(0,0,len(header)-1,len(out)-1)
        cellRange.setDataArray(tuple(out))
        
    def trigger(self,args=''):
        """Called by addon's UI controls or service:URL"""
        self.createProgressDlg()
        self.setEdb("shipair","sjov","BS_2011_e1")
        self.updateProgressDlg("Loading edb: authenticating","")
        self.login("www.shipair.smhi.se","shipair","airviro","dummypw")
        self.updateProgressDlg("Loading substance list and searchkeys","")
        self.loadSubdb()
        print "Loaded subdb"
        self.updateProgressDlg("Loading substance groups","")
        self.loadSubgrpdb()
        print "Loaded subgrpdb"
        self.updateProgressDlg("Loading emission factors","")
        self.loadEmfacdb()
        print "Loaded emfacdb"
        self.updateProgressDlg("Loading point and area sources","")
        self.loadSources()
        self.updateProgressDlg("Edb loaded successfully!","")
        sleep(1)
        print "Loaded sources"
        self.progressContainer.dispose()
        
    def createProgressDlg(self):
        parentwin=self.doc.CurrentController.Frame.ContainerWindow
        dialogModel = self.ctx.ServiceManager.createInstanceWithContext(
            'com.sun.star.awt.UnoControlDialogModel', self.ctx)
        FramePosSize = self.doc.CurrentController.Frame.ContainerWindow.PosSize
        WindowWidth = FramePosSize.Width
        dialogModel.Width = 200
        dialogModel.Height = 100
        dialogModel.PositionX = (WindowWidth/2.2) - 105
        dialogModel.PositionY = 30
        dialogModel.Title = 'Loading sources'

        statusTxtModel = addControl('com.sun.star.awt.UnoControlFixedTextModel',
                               dialogModel, 6, 2, 190, 20, 'Initializing',
                               'statusLabel')

        counterTxtModel = addControl('com.sun.star.awt.UnoControlFixedTextModel',
                             dialogModel, 6, 30, 190, 50, '0',
                             'counterLabel')
        
        self.progressContainer = self.ctx.ServiceManager.createInstanceWithContext('com.sun.star.awt.UnoControlDialog', self.ctx)
        
        self.progressContainer.setModel(dialogModel)
        self.progressContainer.setVisible(True)

        self.statusControl = self.progressContainer.getControl('statusLabel').getModel()
        self.counterControl = self.progressContainer.getControl('counterLabel').getModel()

    def updateProgressDlg(self,statusStr,counterStr):
        self.statusControl.Label=statusStr
        self.counterControl.Label=counterStr
Esempio n. 10
0
def main():

    actionList = [
        'addSubstance',
        'removeSubstance',
        'mapSubstances',
        'addCodeTree',
        'removeCodeTree',
        'moveCodeTree',
        'extractByGeocode',
        'uniteGrids',
        'scale'
    ]

    # setting up parser
    parser = argparse.ArgumentParser(
        description=__doc__,
        formatter_class=argparse.ArgumentDefaultsHelpFormatter
    )
    utils.add_standard_command_options(parser)

    parser.add_argument("-d", "--doc",
                        action="store_true", dest="doc",
                        help="Prints more detailed documentation and exit")

    parser.add_argument("-u", "--user",
                        action="store", dest="user", default=None,
                        help="Specify user manually")

    parser.add_argument("-e", "--edb",
                        action="store", dest="edb", default=None,
                        help="Name of target edb")

    parser.add_argument("-s", "--substance", action="store",
                        dest="substance",
                        help="Name of substance to add or remove")

    parser.add_argument("--substanceFactorFile", action="store",
                        dest="substanceFactorFile",
                        help="File with substance factors")

    parser.add_argument("--substanceMapping", action="store",
                        dest="substanceMapping",
                        help="File with mapping for substance indices")

    parser.add_argument("--codeMapping", action="store",
                        dest="codeMapping",
                        help="File with mapping from old codes to new")

    parser.add_argument("--edbMapping", action="store",
                        dest="edbMapping",
                        help="File with mapping from gc to edb")

    parser.add_argument("-f", "--force",
                        action="store_true", dest="force", default=False,
                        help="Start the process without confirming the domain")

    parser.add_argument("--factor",
                        action="store", type=float, dest="factor",
                        help="Factor used to scale emissions")

    parser.add_argument(
        "-n", "--names", action="store",
        dest="sourceNames", default=['.*'],
        nargs='*',
        help="Space separated list of regular expressions"
    )

    parser.add_argument(
        "--sourceTypes", action="store",
        dest="sourceTypes",
        nargs='*',
        default=['griddb', 'sources'],
        choices=["griddb", "sources", "subgrpdb", "svehdb", "vehdb"],
        help="Source types to process"
    )

    parser.add_argument(
        "--codeType", action="store",
        dest="codeType", default='ac',
        help="Code type to process"
    )

    parser.add_argument(
        "--codeIndex", action="store",
        dest="codeIndex", default=1, type=int,
        help="Index of code tree to use in processing"
    )

    parser.add_argument(
        "--newIndex", action="store",
        dest="newIndex", default=None,
        help="New index when moving an already defined code tree"
    )

    parser.add_argument(
        "--codeLevel", action="store",
        dest="codeLevel", default=1, type=int,
        help="Level of code tree to use in processing")

    parser.add_argument(
        "--actions", action="store",
        dest="actions",
        nargs='*',
        choices=actionList,
        help="Action list"
    )

    args = parser.parse_args()

    if args.doc:
        print doc
        sys.exit()

#     if len(args) > 0:
#         log.error("Incorrect number of arguments")
#         sys.exit(1)

    if args.edb is None:
        log.error("Need to specify edb")
        sys.exit(1)

    if args.user is None:
        log.error("Need to specify user")
        sys.exit(1)

    dmn = Domain()
    edb = Edb(dmn, args.user, args.edb)
    subdb = Subdb(edb)
    subdb.read()
    rsrc = Rsrc(edb.rsrcPath())

    # Check if edb exist
    if not edb.exists():
        log.error("Edb " + args.edb + " does not exist for user " +
                  args.user + " in domain " + dmn.name)
        sys.exit(1)

    if args.codeType.lower() == "ac":
        codeType = "ACTIVITYCODE"
    elif args.codeType.lower() == "gc":
        codeType = "GEOCODE"
    else:
        parser.error("codeType should be either 'gc' or 'ac'")

    if args.codeIndex < 1:
        raise ValueError("Minimum code index is 1")
    if args.codeIndex > 1 and codeType == "gc":
        raise OSError("Multiple geocode trees not implemented")

    for a in args.actions:
        if a not in actionList:
            parser.error("Unknown action %s" % a)

    log.info("User: "******"Edb: " + args.edb)

    loadGridData = False

    # Set values in argsDict
    argDict = {
        "edb": edb,
        "user": args.user,
        "domain": dmn,
        "grids": [],
        "filters": args.sourceNames,
        "codeType": codeType,
        "codeIndex": args.codeIndex,
        "codeLevel": args.codeLevel,
        "sources": None,
        "griddb": None,
        "subgrpdb": None,
        "roaddb": None,
        "vehdb": None,
        "svehdb": None,
        "rsrc": rsrc
    }

    # ----- Reading sources from edb -------------------------------
    if 'griddb' in args.sourceTypes:
        grids = []
        gridNames = edb.listGrids()
        for name in gridNames:
            grd = egrid.Egrid(edb, name)
            grd.readAsc()
            grids.append(grd)
        argDict["grids"] = grids

    if 'sources' in args.sourceTypes:
        argDict["sources"] = list(ModelReader(SourceStream(edb, mode='r')))

    if 'roaddb' in args.sourceTypes:
        log.error("Not implemented with new roaddb-structure")
        sys.exit(1)

    if 'subgrpdb' in args.sourceTypes:
        subgrpdb = Subgrpdb(edb)
        subgrpdb.read()
        argDict["subgrpdb"] = subgrpdb

    # emfacdbdb = Emfacdb(edb)
    # emfacdb.read()
    # argDict["subgrpdb"] = subgrpdb

    if 'svehdb' in args.sourceTypes:
        svehdb = Svehdb(edb)
        svehdb.read()
        argDict["svehdb"] = svehdb

    # TODO:  add option for vehdb

    # parse additional args
    # -----addSubstance--------------------------------------
    if "addSubstance" in args.actions:
        if args.substance is None:
            parser.error("Action addSubstance needs" +
                         "--substance to be specified")
        if args.substanceFactorFile is None:
            parser.error("Option addSubstance also needs" +
                         "--substanceFactorFile to be specified")
        if args.substance not in subdb.substIndices:
            raise ValueError(
                "Substance %s not in substance list" % args.substance)

        substanceNameFactorDict = parseMapping(
            path.abspath(args.substanceFactorFile),
            valueType=float)

        substanceFactorDict = {}
        # Converts mapping between substance name and factor to
        # mapping between substance index and factor
        for name, factor in substanceNameFactorDict.iteritems():
            if name not in subdb.substIndices:
                raise KeyError(
                    "Substance : %s not found in substance list" % name
                )
            ind = subdb.substIndices[name]
            substanceFactorDict[ind] = factor

        argDict["substanceFactorDict"] = substanceFactorDict
        argDict["substance"] = subdb.substIndices[args.substance]

    # ----removeSubstance------------------------------------
    if "removeSubstance" in args.actions:
        if args.substance is None:
            parser.error("Action removeSubstance needs" +
                         "--substance to be specified")

        if args.substance not in subdb.substIndices:
            log.error("Substance %s not in substance list" % args.substance)
            sys.exit(1)

        argDict["substance"] = subdb.substIndices[args.substance]

    # ----mapSubstances--------------------------------------
    if "mapSubstances" in args.actions:
        if args.substanceMapping is None:
            parser.error("Action mapSubstances needs" +
                         "--substanceMapping to be specified")
        substanceMappingFile = path.abspath(args.substanceMapping)
        substanceMapping = parseMapping(
            substanceMappingFile,
            keyType=int,
            valueType=int
        )
        argDict["substanceMapping"] = substanceMapping

    # ----addCodeTree-----------------------------------------
    if "addCodeTree" in args.actions:
        if args.codeMapping is None:
            parser.error("Action addCodeTree needs" +
                         "--codeMapping to be specified")
        if args.newIndex is None:
            parser.error("Action addCodeTree needs" +
                         "--newIndex to be specified")

        codeMappingFile = path.abspath(args.codeMapping)
        codeMapping = parseMapping(codeMappingFile)
        argDict["codeMapping"] = codeMapping

        argDict["newIndex"] = int(args.newIndex)

    # ----removeCodeTree-------------------------------------
    # Only arguments with default values needed, no validation is needed

    # ----moveCodeTree---------------------------------------
    if "moveCodeTree" in args.actions:
        if args.newIndex is None:
            parser.error("Action moveCodeTree needs" +
                         "--newIndex to be specified")
        try:
            argDict["newIndex"] = int(args.newIndex)
        except ValueError:
            log.error("newIndex must be an integer value")
            sys.exit(1)

    # ----extractByGeocode-----------------------------------
    if "extractByGeocode" in args.actions:
        if args.edbMapping is None:
            parser.error("Action extractByGeocode needs" +
                         "--edbMapping to be specified")
        log.info("Slicing edb by geocode")
        edbMappingFile = path.abspath(args.edbMapping)
        # Geocode has to be int
        edbMapping = parseMapping(edbMappingFile, keyType=int)
        argDict["edbMapping"] = edbMapping

    if 'scale' in args.actions:
        argDict['substance'] = subdb.substIndices[args.substance]
        argDict['factor'] = args.factor
        if args.factor is None:
            log.error("Must specify --factor")
            sys.exit(1)

        if args.substance is None:
            log.error("Must specify --substance")
            sys.exit(1)

    # Processing actions
    for action in args.actions:
        log.info("Running action: %s" % action)
        argDict = eval(action)(argDict)

    # Writes each processed grid to edb
    if loadGridData:
        for grd in argDict["grids"]:
            if not match(grd["NAME"], argDict["filters"]) or grd.hasSubgrp():
                continue
            else:
                log.debug(
                    "Wrote grid %s to edb: %s,  user: %s" % (
                        grd.par["NAME"].val, grd.edb.name, grd.user)
                )
                grd.load()
    else:
        for grd in argDict["grids"]:
            if not match(grd["NAME"], argDict["filters"]) or grd.hasSubgrp():
                continue
            else:
                log.debug(
                    "Wrote .asc-file for grid %s to edb: %s,  user: %s" % (
                        grd.par["NAME"].val, grd.edb.name, grd.user)
                )
                grd.writeAsc(grd.getAscPath())

    # Writes each processed database to edb
    if argDict["sources"] is not None:
        with SourceStream(edb, mode="w") as stream:
            model_writer = ModelWriter(stream)
            for src in argDict["sources"]:
                log.debug('Wrote source %s' % src.NAME)
                model_writer.write(src)

    for dbName in ["roaddb", "subgrpdb", "svehdb", "vehdb"]:
        if argDict[dbName] is not None:
            argDict[dbName].write()
            log.info(
                "Wrote %s to edb: %s, user: %s" % (
                    dbName, edb.name, edb.user)
            )
Esempio n. 11
0
def main():

   # Parse command line arguments
    parser = argparse.ArgumentParser(description=__doc__)
    utils.add_standard_command_options(parser)


    parser.add_argument("controlfile", metavar='CONTROLFILE',
                       action="store",
                      help="Controlfile for topdown processing")
    
    parser.add_argument("-t", "--template", metavar='TEMPLATEFILE',
                        action="store",dest="cf",default=None,
                        help="Generate default controlfile")

    args = parser.parse_args()


    if args.cf is not None:
        generateCf(args.cf)
        log.info("Wrote default controlfile")
        sys.exit(0)

    log.info("Starting topdown processing")
    # Opening controlfile
    cf = ControlFile(args.controlfile)
    dmn = Domain()

    log.info("Reading topdown table")
    tdTableName = cf.findExistingPath("topDownTable:")
    tdTable = DataTable()
    tdTable.keys.append("Code")
    tdTable.read(tdTableName,delimiter=";")

    log.info("Reading national totals table")
    natTotalTableName = cf.findExistingPath("nationalTotalTable:")
    natTable = DataTable(desc=[{"id": "Code", "type":unicode},
                               {"id": "description", "type":unicode}])
    natTable.keys.append("Code")
    natTable.read(natTotalTableName, units=True, defaultType=str)
    notationKeys = ["NE", "NO", "NA", "IE"]

    
    
    log.debug("Remove notation keys from national totals table")
    for row in natTable.data:
        for i in range(len(row)):
            if row[i] in notationKeys:
                row[i] = None

    log.debug("Convert all emission columns in national totals to float")
    for colId in natTable.listIds():
        if colId not in ["Code","description"]:
            natTable.convertCol(colId,float)

    log.debug("Store units from national totals for each substance in dict")
    natUnits={}
    for col in natTable.desc:
        if col.get("units",None)!=None:
            natUnits[col["id"]]=col["units"]
        
    log.debug("Read remaining data from control file")
    bottomupEdbName = cf.findString("bottomUpEdb:")
    topDownEdbName = cf.findString("topDownEdb:")
    emissionsEdbName = cf.findString("emissionsEdb:")
    userName = cf.findString("user:"******"year:")

    #initialize edb objects
    buEdb = Edb(dmn,userName,bottomupEdbName)
    tdEdb = Edb(dmn,userName,topDownEdbName)
    eEdb = Edb(dmn,userName,emissionsEdbName)
    log.info("Reading/preparing EDB:s")
    
    log.info("Reading subdb")
    subdb = Subdb(eEdb)
    subdb.read()

    log.info("Reading subgrpdb")
    subgrpdb = SubgrpStream(buEdb)
    subgrpdb.read()

    log.info("Reading facilitydb")
    facilityIn = FacilityStream(buEdb)

    log.info("Reading companydb")
    companyIn = CompanyStream(buEdb)
    
    facilityOut = FacilityStream(eEdb,mode="w")
    companyOut = CompanyStream(eEdb,mode="w")

    log.info("Writing company db to result edb")
    companyOut.write(companyIn.read())

    log.info("Writing facility db to result edb")
    facilityOut.write(facilityIn.read())

    if not buEdb.exists():
        log.error("Edb " + buEdb.name + " does not exist for user " + userName +
                  " in domain " + dmn.name)
        sys.exit(1)
    if not tdEdb.exists():
        log.error("Edb " + tdEdb.name + " does not exist for user " + userName +
                  " in domain " + dmn.name)
        sys.exit(1)
    if not eEdb.exists():
        log.error("Edb " + eEdb.name + " does not exist for user " + userName +
                  " in domain " + dmn.name)
        sys.exit(1)

    keys = tdEdb.listGrids()
    msg = "%i keys found in edb: %s" % (len(keys), tdEdb.name)
    log.info(msg)

    # sourcedb from bottom-up edb
    with SourceStream(buEdb, mode='rb') as source_instream:
        source_reader = ModelReader(source_instream)
        bu_sources = list(source_reader)

    log.info(
        "%i point sources found in edb: %s" % (
            len(bu_sources),
            buEdb.name)
    )


    # Empty sourcedb of the result edb
    if cf.findBoolean("emptyEmissionSourcedb:"):
        eEdb.empty_sourcedb()
        e_sources = []
        log.info("Removed point sources from edb: %s" % (eEdb.name))
    else:
        # sourcedb from emission edb (result edb)
        with SourceStream(eEdb, mode='rb') as source_instream:
            source_reader = ModelReader(source_instream)
            e_sources = list(source_reader)

        msg = "%i point sources found in edb: %s" % (len(e_sources), eEdb.name)
        log.info(msg)

    if not path.exists(eEdb.rsrcPath()):
        log.error("No edb.rsrc exists for emission edb")
        sys.exit()
    else:
        rsrc = Rsrc(eEdb.rsrcPath())
    acIndex = cf.findInt("acIndex:")
    codeDepth = rsrc.ac[acIndex-1].depth

    substances = cf.findStringList("substances:")
        
    for subst in substances:
        if subst not in subdb.substIndices:
            log.error("Substance: " + subst + " not in Airviro substance list")
            sys.exit()
    
    # Initialize trace for debug and additional logging
    if cf.findBoolean("trace:") == True:
        log.info("Initializing trace for detailed logging")
        trace = TraceDef(
            active=True,
            substances=cf.findStringList("trace.substances:"),
            logfile=cf.findString("trace.logfile:"),
            regdefgc=cf.findIntList("trace.regdef.gc:",
                                    optional=True,
                                    default=None),
            gcDefRaster=cf.findExistingPath("trace.gcraster:")
        )                               
    else:
        trace = TraceDef(active=False)

    log.info("Initializing result table")
    resTablePath = cf.findString("resTable:")
    resTable = DataTable(desc=[{"id": "Code", "type": unicode}])
    resTable.keys.append("Code")
    for subst in substances:
        resTable.addCol({"id": subst, "type": float, "unit": "%"})
        
    # Create emission grid template (with geocodes)
    log.info("Reading emission grid template")
    eGridTemplatePath = cf.findExistingPath("emisGridTemplatePath:")
    eGridTemplate = Egrid(eEdb,"name")
    if eGridTemplatePath[-4:] == ".asc":
        eGridTemplatePath=eGridTemplatePath[:-4]
    eGridTemplate.readData(eGridTemplatePath)
    eGridTemplate.substances = {}
    eGridTemplate.par["SUBSTANCE"].val = []
    dd = {"key": None,
          "regstat": None,
          "regdef": None,
          "bu_sources": bu_sources,
          "psIndices": [],
          "units": natUnits,
          "rsrc": rsrc,
          "subdb": subdb,
          "trace": trace,
          "subgrpdb": subgrpdb
          }    

    # Process all rows in the topdown table
    for row in tdTable.data:
        code = row[tdTable.colIndex["Code"]]
        active = row[tdTable.colIndex["Active"]]
        statType = row[tdTable.colIndex["Stat_type"]]
        if active == "no":
            continue
        log.info("Code: "+code)
        
        distributed=False

        # Add '-' to the code to reach max length (fix for a GUI bug)
        airviroCode = code
#         while len(airviroCode.split(".")) < codeDepth:
#             airviroCode += ".-"
            
        tdrow = tdTable.data[tdTable.rowIndex([code])]
        nrow = natTable.data[natTable.rowIndex([code])]

        # Create a resTable row to fill with data
        resrow = [None] * resTable.ncols
        resrow[0] = code

        # Check if national totals are non-zero
        nonZero = False
        for val in nrow:
            if val != None:
                if val > 0:
                    nonZero = True
                    break

        # Filter out indices for pointsources with the current ac
        # Also including sources coded with sub-codes
        # This allows to estimate top-down emissions on a higher code-level
        psIndices = []
        for i, ps in enumerate(bu_sources):
            codeMatch = False
            
            for emis in ps.EMISSION:                
                # It is assumed that the first code is used while processing topdown
                ac = emis.ACTCODE[0]
                if ac[-1] == ".":
                    ac=ac[:-1]
#                 if ac[:len(code)] == code:                    
                if ac == code:                    
                    codeMatch = True
                    break

            if not codeMatch:
                for emis in ps.SUBGRP:                
                    # It is assumed that the first code is used while processing topdown
                    ac = emis.ACTCODE[0]
                    if ac[:len(code)] == code:                    
                        codeMatch = True
                        break

            if codeMatch:
                psIndices.append(i)

        dd["psIndices"] = psIndices

        keyName = row[tdTable.colIndex["Key"]]

        #If no distribution key specified and no ps in bottom-up edb - cont.
        if keyName is None and psIndices == []:
            log.debug("No key and no point sources found for code: %s, skipping..." % code)
            resTable.addRow(resrow)
            continue

        if psIndices!=[]:
            msg = "--Found %i pointsources" % len(psIndices)
            log.info(msg)

        if keyName is not None:
            if keyName not in keys:
                log.error("No such key: " + keyName)
                sys.exit()

            msg = "--Key: %s" % keyName
            log.info(msg)
            keyGrid = Egrid(tdEdb, keyName)
            keyGrid.readData()
            log.debug("Read key: " + keyName + " from topdownEdb")

            # create emission grid to store distributed emissions
            eGrid = deepcopy(eGridTemplate)
            eGrid.name = code.replace(".", "_")
            eGrid.par["NAME"].val = code
            eGrid.par["INFO2"].val = "Distribution key: " + keyGrid.par["NAME"].val
            eGrid.par["ACTIVITYCODE"].val = [airviroCode.split(".")]

        regstatName = row[tdTable.colIndex["Regstat"]]
        regdefName = row[tdTable.colIndex["Regdef"]]
                
        if regstatName is not None:
            if regdefName is None:
                log.error("No region definition given for regional statistics: " +
                          regstatName)
                sys.exit(1)
            regstatPath = path.join(dmn.domainPath(), "topdown", "regstat", regstatName)
            regstat = DataTable()
            log.info("regstatPath: "+regstatPath)
            regstat.read(regstatPath, units=True, defaultType=float, delimiter=";")
            if not "Geocode" in regstat.listIds():
                log.error("No Geocode column found in regstat")
                sys.exit(1)
            regstat.convertCol("Geocode", int)
            regstat.keys.append("Geocode")  # Making Geocode the primary key

            # create list of unique geo codes
            geocodes = [row[regstat.colIndex["Geocode"]] for row in regstat.data]
            geocodes = unique(geocodes)


            for colId in regstat.listIds():
                if colId.lower() == "year":
                    rows = []
                    regstat.convertCol(colId, int)
                    # Make it possible to accumulate year
                    regstat.setKeys(regstat.keys + [colId])
            
                    # Calculates the total emission for each geocode
                    # in case there are multiple rows for different fuels etc
                    colsToSum = regstat.listIds()
                    colsToSum.remove(colId)
                    colsToSum.remove("Geocode")
                    for gc in geocodes:
                        # sums all numeric values in colsToSum for
                        # rows matching row id [gc,year]
                        #returns an accumulated row and appends it to rows
                        rowId = regstat.dict2RowId({"Geocode": gc, colId: year})
                        rows.append(regstat.accumulate(rowId, "sum", colsToSum))
                    regstat.data = rows  # replace original rows with accumulated rows
                    regstat.keys.remove(colId)
                    break
                
#             dd["regstat"] = regstat
            regdef = Raster()
            regdefPath = path.join(dmn.domainPath(), "topdown", "regdef", regdefName)
            regdef.read(regdefPath)

            dd["regstat"] = regstat
            dd["regdef"] = regdef
        else:
            dd["regstat"] = None
            dd["regdef"] = None

        if dd["regstat"] is not None and len(bu_sources) > 0 and statType == "fixed":
            log.info("--Regionalizing pointsources")
            dd = regionalizePS(dd, code)

        if keyName is not None and nonZero:
            regionalizedDefault = False
            # Spatial distribution of emissions
            for subst in substances:
                
                sInd = subdb.substIndices[subst]
                toUnit = dd["units"][subst] + "/year"
                ntot = nrow[natTable.colIndex[subst]]                
                pstot = 0
                for i in dd["psIndices"]:
                    source = dd["bu_sources"][i]
                    # TODO: should give reference to subgrps to include emis from them
                    pstot += source.get_emis(
                        sInd,
                        toUnit,
                        eEdb,
                        actcodes=[code]
                    )

                if ntot is None or ntot == 0:
                    if pstot > 0:
                        # 9999 is used as marker for no national total 
                        resrow[resTable.colIndex[subst]] = 9999.0
                        log.warning(
                            "Nattot is 0 but ps tot is: %f %s" % (pstot, toUnit))
                    continue
                
                nrest = ntot - pstot

                resrow[resTable.colIndex[subst]] = 100.0
            
                if abs(nrest / ntot) < 0.0001:
                    nrest = 0
                    log.info(
                        "--Rest is < 0.01 % of national total, rounded to zero"
                    )
                    continue
                elif nrest < 0:
                    log.warning(
                        "--National rest is below zero, %4.2f proc for %s" % (
                            -1 * nrest / ntot * 100,
                             subst)
                    )
                    dd["trace"].write()
#                    continue
                log.info(
                    "---Substance: "+subst+
                    ", rest is: " + str(nrest) +
                    toUnit + " = " + str(nrest / ntot * 100.0) + "%"
                )
                
                try: 
                    keyRast = keyGrid.substances[sInd]
                except KeyError:
                    keyRast = keyGrid.substances[subdb.substIndices["all"]]
                    
                dd["key"] = keyRast
                if dd["regstat"] is not None:
                    if (subst not in regstat.colIndex and 
                        sInd not in keyGrid.substances and not regionalizedDefault):
                        dd = regionalizeKey(dd, subst, code)
                        regionalizedDefault = True                                    
                    else:
                        dd = regionalizeKey(dd, subst, code)
                    
                emisRast = distribute(dd["key"], nrest)
                emisRast = emisRast * unitConvFac(toUnit, "ton/year")
                eGrid.addData(emisRast, dd["subdb"].substIndices[subst])
                distributed = True

        else:
            # resTable is filled
            # In case all national totals are zero but there are ps
            for subst in substances:
                sInd = dd["subdb"].substIndices[subst]
                toUnit = dd["units"][subst] + "/year"
                ntot = nrow[natTable.colIndex[subst]]               
                pstot = 0
                for i in dd["psIndices"]:
                    source = dd["bu_sources"][i]
                    # subgrps are not used!
                    pstot += source.get_emis(sInd, toUnit, buEdb,
                                             actcodes=[code])

                if ntot!=0 and ntot is not None:
                    resrow[resTable.colIndex[subst]] = pstot / ntot * 100.0
                else:
                    resrow[resTable.colIndex[subst]] = -999.0

        if len(dd["psIndices"]) > 0:
            tmp_sources = (bu_sources[i] for i in dd["psIndices"])
            with SourceStream(eEdb, mode='wb') as out_source_stream:
                source_writer = ModelWriter(out_source_stream)
                for source in tmp_sources:
                    source_writer.write(source)
            log.debug("Wrote ps to emission edb")

        if distributed:
            eGrid.load()
            log.debug("Wrote emission grid to emission edb")    

        dd["trace"].write()
        resTable.addRow(resrow)

    resTableFile = open(resTablePath,"w")
    resTable.write(resTableFile)

    log.info("Finished topdown process")
Esempio n. 12
0
                    break
                
        for key in templateEmfacdb.activities:
            
            if not targetEmfacdb[key] == templateEmfacdb[key]:              
                log.error("Edb's have incompatible emfacdb,"+
                          " cannot perform join including emission factors")
                if "activity_emis" not in skipPars:
                    skipPars.append("activity_emis")
                break

        if not "activity_emis" in skipPars:
            log.debug("Emfacdb are identical in both target and template")

    log.debug("Reading searchkeys from target edb")
    targetSubdb=Subdb(targetEdb)
    targetSubdb.read()
    log.debug("Reading searchkeys from template edb")
    templateSubdb=Subdb(templateEdb)
    templateSubdb.read()

    if templateSubdb.undefined():
        log.debug("No searchkeys defined in template edb, no transfer is done")
    elif targetSubdb.undefined():
        log.info("Searchkey definition transfered from template to target edb")
        templateSubdb.setEdb(targetEdb)
        templateSubdb.write()
        
    elif targetSubdb!=templateSubdb:
        skipPars+=["SEARCHKEY1","SEARCHKEY2","SEARCHKEY3","SEARCHKEY4","SEARCHKEY5"]
        log.warning("Searchkey definitions are not identical in target"+