def test_majority_vote_empty_item(self):
# Bug: majority vote with row of invalid annotations fails
annotations = np.array(
[[1, 2, 3],
[MV, MV, MV],
[1, 2, 2]]
)
expected = [1, MV, 2]
result = pu.majority_vote(annotations)
np.testing.assert_equal(expected, result)
def _show_majority_vote_changed(self):
plot = self.posterior_plot
if self.show_majority_vote:
majority = majority_vote(self.annotations)
plot.add_markings(majority, 'majority',
'triangle', 0., 0.,
marker_size=3,
line_width=1.,
marker_color='green')
else:
plot.remove_markings('majority')
plot.plot_posterior.request_redraw()
def test_majority_vote(self):
annotations = np.array(
[
[1, 2, 2, MV],
[2, 2, 2, 2],
[1, 1, 3, 3],
[1, 3, 3, 2],
[MV, 2, 3, 1],
[MV, MV, MV, 3]
]
)
expected = np.array([2, 2, 1, 3, 1, 3])
result = pu.majority_vote(annotations)
np.testing.assert_equal(expected, result)
def _show_majority_vote_changed(self):
plot = self.posterior_plot
if self.show_majority_vote:
majority = majority_vote(self.annotations)
plot.add_markings(majority,
'majority',
'triangle',
0.,
0.,
marker_size=3,
line_width=1.,
marker_color='green')
else:
plot.remove_markings('majority')
plot.plot_posterior.request_redraw()