class DealIIMatrixOperator(OperatorBase):
"""Wraps a dealII matrix as an |Operator|."""
linear = True
def __init__(self, matrix, name=None):
self.source = DealIIVectorSpace(matrix.m())
self.range = DealIIVectorSpace(matrix.n())
self.matrix = matrix
self.name = name
def apply(self, U, ind=None, mu=None):
assert U in self.source
assert U.check_ind(ind)
vectors = U._list if ind is None else [U._list[ind]] if isinstance(ind, Number) else [U._list[i] for i in ind]
R = self.range.zeros(len(vectors))
for u, r in zip(vectors, R._list):
self.matrix.vmult(r.impl, u.impl)
return R
def apply_adjoint(self, U, ind=None, mu=None, source_product=None, range_product=None):
assert U in self.range
assert U.check_ind(ind)
assert source_product is None or source_product.source == source_product.range == self.source
assert range_product is None or range_product.source == range_product.range == self.range
if range_product:
PrU = range_product.apply(U, ind=ind)._list
else:
PrU = U._list if ind is None else [U._list[ind]] if isinstance(ind, Number) else [U._list[i] for i in ind]
ATPrU = self.source.zeros(len(PrU))
for u, r in zip(PrU, ATPrU._list):
self.matrix.Tvmult(r.impl, u.impl)
if source_product:
return source_product.apply_inverse(ATPrU)
else:
return ATPrU
def apply_inverse(self, V, ind=None, mu=None, least_squares=False):
assert V in self.range
if least_squares:
raise NotImplementedError
vectors = V._list if ind is None else [V._list[ind]] if isinstance(ind, Number) else [V._list[i] for i in ind]
R = self.source.zeros(len(vectors))
for r, v in zip(R._list, vectors):
self.matrix.cg_solve(r.impl, v.impl)
return R
def assemble_lincomb(self, operators, coefficients, solver_options=None, name=None):
if not all(isinstance(op, (DealIIMatrixOperator, ZeroOperator)) for op in operators):
return None
assert not solver_options # linear solver is not yet configurable
matrix = pd2.SparseMatrix(operators[0].matrix.get_sparsity_pattern())
matrix.copy_from(operators[0].matrix)
matrix *= coefficients[0]
for op, c in izip(operators[1:], coefficients[1:]):
if isinstance(op, ZeroOperator):
continue
matrix.add(c, op.matrix)
return DealIIMatrixOperator(matrix, name=name)
def dealii_vector_array_factory(length, dim, seed):
U = DealIIVectorSpace(dim).zeros(length)
np.random.seed(seed)
for v, a in zip(U._list, np.random.random((length, dim))):
v.impl[:] = a
return U
def _dealii_vector_spaces(draw, np_data_list, compatible, count, dims):
return [(DealIIVectorSpace(d), ar)
for d, ar in zip(dims, np_data_list)]
def __init__(self, matrix, name=None):
self.source = DealIIVectorSpace(matrix.m())
self.range = DealIIVectorSpace(matrix.n())
self.matrix = matrix
self.name = name
