def __init__(self):
lib = load_library('metis')
# Try to determine the data types METIS was compiled with
with silence():
self._probe_types(lib)
# METIS_SetDefaultOptions
self.METIS_SetDefaultOptions = lib.METIS_SetDefaultOptions
self.METIS_SetDefaultOptions.argtypes = [c_void_p]
self.METIS_SetDefaultOptions.errcheck = self._errcheck
# METIS_PartGraphKway
self.METIS_PartGraphKway = lib.METIS_PartGraphKway
self.METIS_PartGraphKway.argtypes = [
POINTER(self.metis_int), POINTER(self.metis_int),
c_void_p, c_void_p, c_void_p, c_void_p, c_void_p,
POINTER(self.metis_int), c_void_p, c_void_p, c_void_p,
POINTER(self.metis_int), c_void_p
]
self.METIS_PartGraphKway.errcheck = self._errcheck
# METIS_PartGraphRecursive
self.METIS_PartGraphRecursive = lib.METIS_PartGraphRecursive
self.METIS_PartGraphRecursive.argtypes = [
POINTER(self.metis_int), POINTER(self.metis_int),
c_void_p, c_void_p, c_void_p, c_void_p, c_void_p,
POINTER(self.metis_int), c_void_p, c_void_p, c_void_p,
POINTER(self.metis_int), c_void_p
]
self.METIS_PartGraphRecursive.errcheck = self._errcheck
def __init__(self):
lib = load_library('metis')
# Try to determine the data types METIS was compiled with
with silence():
self._probe_types(lib)
# METIS_SetDefaultOptions
self.METIS_SetDefaultOptions = lib.METIS_SetDefaultOptions
self.METIS_SetDefaultOptions.argtypes = [c_void_p]
self.METIS_SetDefaultOptions.errcheck = self._errcheck
# METIS_PartGraphKway
self.METIS_PartGraphKway = lib.METIS_PartGraphKway
self.METIS_PartGraphKway.argtypes = [
POINTER(self.metis_int),
POINTER(self.metis_int), c_void_p, c_void_p, c_void_p, c_void_p,
c_void_p,
POINTER(self.metis_int), c_void_p, c_void_p, c_void_p,
POINTER(self.metis_int), c_void_p
]
self.METIS_PartGraphKway.errcheck = self._errcheck
# METIS_PartGraphRecursive
self.METIS_PartGraphRecursive = lib.METIS_PartGraphRecursive
self.METIS_PartGraphRecursive.argtypes = [
POINTER(self.metis_int),
POINTER(self.metis_int), c_void_p, c_void_p, c_void_p, c_void_p,
c_void_p,
POINTER(self.metis_int), c_void_p, c_void_p, c_void_p,
POINTER(self.metis_int), c_void_p
]
self.METIS_PartGraphRecursive.errcheck = self._errcheck
def _partition_graph(self, graph, partwts):
w = self._wrappers
# Type conversion
vtab = np.asanyarray(graph.vtab, dtype=w.metis_int_np)
etab = np.asanyarray(graph.etab, dtype=w.metis_int_np)
vwts = np.asanyarray(graph.vwts, dtype=w.metis_int_np)
ewts = np.asanyarray(graph.ewts, dtype=w.metis_int_np)
partwts = np.array(partwts, dtype=w.metis_flt_np)
# Normalise the weights
partwts /= np.sum(partwts)
# Allocate the partition array
parts = np.empty(len(vtab) - 1, dtype=w.metis_int_np)
# Allocate our options array
opts = np.empty(w.METIS_NOPTIONS, dtype=w.metis_int_np)
w.METIS_SetDefaultOptions(opts.ctypes)
# Process our options
for k, v in self.opts.items():
opts[getattr(w, f'METIS_OPTION_{k.upper()}')] = v
# Select the partitioning function
if self.opts['ptype'] == self.enum_opts['ptype']['rb']:
part_graph_fn = w.METIS_PartGraphRecursive
else:
part_graph_fn = w.METIS_PartGraphKway
# Integer parameters
nvert, nconst = w.metis_int(len(vtab) - 1), w.metis_int(1)
npart, objval = w.metis_int(len(partwts)), w.metis_int()
# Partition
with silence():
part_graph_fn(
nvert, nconst, vtab.ctypes, etab.ctypes, vwts.ctypes, None,
ewts.ctypes, npart, partwts.ctypes, None, opts.ctypes, objval,
parts.ctypes
)
# Check for invalid partition numbers
if np.max(parts) >= len(partwts):
raise RuntimeError('Invalid partition number from METIS')
return parts