def run(self, **kwargs):
"""Run."""
print("model", min(self.model()), max(self.model()))
for i in range(self.maxIter()):
boxprint("Iteration #%d" % i, width=80, sym="+")
self.oneStep()
boxprint("Iteration: %d | Chi^2: %.2f | RMS: %.2f%%" % (i,
self.chi2(), self.relrms()))
if self.chi2() <= 1.0:
print("Done. Reached target data misfit of chi^2 <= 1.")
break
phi = self.getPhi()
if i > 2:
print("Phi / oldphi", phi / oldphi)
if (i > 10) and (phi / oldphi >
(1 - self.deltaPhiAbortPercent() / 100)):
print("Done. Reached data fit criteria of delta phi < %.2f%%."
% self.deltaPhiAbortPercent())
break
if i + 1 == self.maxIter():
print("Done. Maximum number of iterations reached.")
oldphi = phi
return self.model()
from pygimli.utils import boxprint
from sidebar_gallery import make_gallery
import pkg_resources
# for doc rendering on headless machines (jenkins server)
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
sys.path.insert(0, os.path.abspath('.'))
try:
# from _build.doc.conf_environment import *
from conf_environment import *
boxprint("Building documentation out-of-source. Good.")
except ImportError:
TRUNK_PATH = '..'
SPHINXDOC_PATH = '.'
DOC_BUILD_DIR = ''
DOXY_BUILD_DIR = ''
boxprint("Building documentation in-source. Don't forget to make clean.")
sys.path.append(os.path.abspath(join(SPHINXDOC_PATH, '_sphinx-ext')))
# The following line is necessary for the Tools section
sys.path.append(os.path.abspath(join(TRUNK_PATH, 'python/apps')))
sys.path.append(os.path.abspath(join(TRUNK_PATH, 'python')))
sys.path.append(os.path.abspath(join(TRUNK_PATH, 'python/pygimli')))
# -- General configuration ----------------------------------------------------
from pygimli.utils import boxprint
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
# sys.path.insert(0, os.path.abspath('.'))
try:
#from _build.doc.conf_environment import *
from conf_environment import *
except ImportError:
TRUNK_PATH = '..'
SPHINXDOC_PATH = '.'
DOC_BUILD_DIR = ''
DOXY_BUILD_DIR = ''
boxprint("Building documentation in-source. Don't forget to make clean.")
sys.path.append(os.path.abspath(join(SPHINXDOC_PATH, '_sphinx-ext')))
# The following line is necessary for the Tools section
sys.path.append(os.path.abspath(join(TRUNK_PATH, 'python/apps')))
# -- General configuration -----------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
needs_sphinx = '1.2'
# Check for external sphinx extensions
deps = ['sphinxcontrib-programoutput', 'sphinxcontrib-bibtex', 'numpydoc']
modules = [str(m).rsplit()[0] for m in pip.get_installed_distributions()]
import pygimli
from pygimli.utils import boxprint
import pkg_resources
# for doc rendering on headless machines (jenkins server)
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
from sidebar_gallery import make_gallery
try:
# from _build.doc.conf_environment import *
from conf_environment import *
boxprint("Building documentation out-of-source. Good.")
except ImportError:
TRUNK_PATH = '..'
SPHINXDOC_PATH = '.'
DOC_BUILD_DIR = ''
DOXY_BUILD_DIR = ''
boxprint("Building documentation in-source. Don't forget to make clean.")
sys.path.append(os.path.abspath(join(SPHINXDOC_PATH, '_sphinx-ext')))
# The following line is necessary for the Tools section
sys.path.append(os.path.abspath(join(TRUNK_PATH, 'python/apps')))
sys.path.append(os.path.abspath(join(TRUNK_PATH, 'python')))
sys.path.append(os.path.abspath(join(TRUNK_PATH, 'python/pygimli')))
# -- General configuration ----------------------------------------------------
