Esempio n. 1
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 def test_nonexistent(self):
     'Test trying to use a genome with no Ensembl data at UCSC'
     badname = 'Nonexistent.Fake.Bogus'
     try:
         badiface = UCSCEnsemblInterface(badname)
     except KeyError:
         return
     raise ValueError("Bad sequence name %s has failed to return an error" %
                      badname)
Esempio n. 2
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 def setUp(self):
     self.iface = UCSCEnsemblInterface('Bio.Seq.Genome.HUMAN.hg18')