def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings, instruments, scripts, log_function=log_function, data_path=data_path) # defines which daqs contain the input and output based on user selection of daq interface if self.settings['daq_type'] == 'PCI': self.daq_in = self.instruments['NI6259']['instance'] self.daq_out = self.instruments['NI6259']['instance'] elif self.settings['daq_type'] == 'cDAQ': self.daq_in = self.instruments['NI9402']['instance'] self.daq_out = self.instruments['NI9263']['instance']
def __init__(self, scripts, name=None, settings=None, log_function=None, timeout=1000000000, data_path=None): self._recording = False self._timeout = timeout Script.__init__(self, name, settings, scripts=scripts, log_function=log_function, data_path=data_path) self.data = deque() self._sweep_values = list({ 'frequency': [], 'x': [], 'y': [], 'phase': [], 'r': [] }.keys())
def __init__(self, instruments=None, name=None, settings=None, scripts=None, log_function=None, data_path=None): Script.__init__(self, name, settings=settings, instruments=instruments, scripts=scripts, log_function=log_function, data_path=data_path) self.data = { 'baseline_image': [], 'baseline_extent': [], 'new_image': [], 'new_image_extent': [], 'initial_galvo_position': [], 'shift': [], 'correlation_image': [] } self.baseline_processed_image = self.data['baseline_image'] self.new_processed_image = self.data['new_image'] self.count_executions = 0 # counts how often the script has been updated
def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path) self.data = { 'counts': deque(), 'laser_power': deque(), 'normalized_counts': deque(), 'laser_power2': deque() }
def __init__(self, instruments=None, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Sets up script and sends width and height settings to camera Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings=settings, instruments=instruments, scripts=scripts, log_function=log_function, data_path=data_path) self.instruments['Camera']['instance'].update({ 'width': self.settings['width'], 'height': self.settings['height'] })
def __init__(self, instruments=None, name=None, settings=None, scripts=None, log_function=None, data_path=None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings=settings, instruments=instruments, scripts=scripts, log_function=log_function, data_path=data_path) self.data = { 'baseline_image': [], 'new_image': [], 'image_extent': [], 'correlation_image': [] }
def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path) self.data = { 'plant_output': deque(maxlen=self.settings['buffer_length']), 'control_output': deque(maxlen=self.settings['buffer_length']) }
def __init__(self, instruments, name=None, settings=None, log_function=None, timeout=1000000000, data_path=None): self._recording = False self._timeout = timeout Script.__init__(self, name, settings, instruments, log_function=log_function, data_path=data_path) self.sweeper = self.instruments['zihf2']['instance'].daq.sweep( self._timeout) self.sweeper.set('sweep/device', self.instruments['zihf2']['instance'].device) self.data = deque() # todo: clean this up! and plot data in gui! self._sweep_values = list({ 'frequency': [], 'x': [], 'y': [], 'phase': [], 'r': [] }.keys())
def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path) self.data_to_plot = { 'voltage': deque(maxlen=self.settings['max_len_to_plot']) } self.data['voltage'] = list()
def __init__(self, name=None, settings=None, log_function = None, data_path = None): """ Example of a script Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings, log_function= log_function, data_path = data_path)
def __init__(self, instruments = None, scripts = None, name = None, settings = None, log_function = None, data_path = None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings = settings, instruments = instruments, scripts = scripts, log_function= log_function, data_path = data_path)
def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ init script function see superclass for details on the parameters """ Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path) self.data = None
def __init__(self, scripts, instruments = None, name = None, settings = None, log_function = None, data_path = None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings, instruments, scripts, log_function= log_function, data_path = data_path)
def __init__(self, scripts, name = None, settings = None, log_function = None, timeout = 1000000000, data_path = None): self._recording = False self._timeout = timeout Script.__init__(self, name, settings, scripts = scripts, log_function= log_function, data_path = data_path) self.data = deque() self._sweep_values = list({'frequency' : [], 'x' : [], 'y' : [], 'phase': [], 'r':[]}.keys())
def __init__(self, instruments, scripts = None, name=None, settings=None, log_function=None, data_path = None): Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path = data_path) # defines which daqs contain the input and output based on user selection of daq interface if self.settings['daq_type'] == 'PCI': self.daq_in = self.instruments['NI6259']['instance'] self.daq_out = self.instruments['NI6259']['instance'] elif self.settings['daq_type'] == 'cDAQ': self.daq_in = self.instruments['NI9402']['instance'] self.daq_out = self.instruments['NI9263']['instance']
def __init__(self, instruments = None, scripts = None, name = None, settings = None, log_function = None, data_path = None): """ Sets up script and sends width and height settings to camera Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings = settings, instruments = instruments, scripts = scripts, log_function= log_function, data_path = data_path) self.instruments['Camera']['instance'].update({'width': self.settings['width'], 'height': self.settings['height']})
def __init__(self, scripts, instruments = None, name = None, settings = None, log_function = None, data_path = None): """ Initializes the script Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ self.scan_label = 'Motor Position [um]' Script.__init__(self, name, settings, instruments, scripts, log_function= log_function, data_path = data_path)
def __init__(self, instruments = None, name = None, settings = None, scripts = None, log_function = None, data_path = None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings = settings, instruments = instruments, scripts = scripts, log_function= log_function, data_path = data_path) self.data = {'baseline_image': [], 'new_image': [], 'image_extent': [], 'correlation_image': []}
def __init__(self, instruments, scripts, name=None, settings=None, log_function=None, data_path=None): """ Standard script initialization Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ self._DEFAULT_SETTINGS += PulsedExperimentBaseScript._DEFAULT_SETTINGS Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path)
def __init__(self, instruments, name = None, settings = None, log_function = None, data_path = None): """ Example of a script that makes use of an instrument Args: instruments: instruments the script will make use of name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ # call init of superclass Script.__init__(self, name, settings, instruments, log_function= log_function, data_path = data_path)
def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path) self.data = {'counts': deque(), 'laser_power': deque(), 'normalized_counts': deque(), 'laser_power2': deque()}
def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path) self.data_to_plot = {'voltage': deque(maxlen = self.settings['max_len_to_plot'])} self.data['voltage'] = list()
def __init__(self, instruments = None, scripts = None, name = None, settings = None, log_function = None, data_path = None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings = settings, instruments = instruments, scripts = scripts, log_function= log_function, data_path = data_path) if self.settings['daq_type'] == 'PCI': self.daq_out = self.instruments['NI6259_laser_power']['instance'] elif self.settings['daq_type'] == 'cDAQ': self.daq_out = self.instruments['NI9263_laser_power']['instance']
def __init__(self, scripts, instruments = None, name = None, settings = None, log_function = None, data_path = None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings, instruments, scripts, log_function= log_function, data_path = data_path) #always want to use the autofocus's location self.scripts['find_NV'].settings['center_on_current_location'] = True self.scripts['set_laser'].settings['point'] = self.scripts['take_image'].settings['point_a'] self.scripts['set_laser'].run()
def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path)
def __init__(self, instruments, name = None, settings = None, log_function = None, timeout = 1000000000, data_path = None): self._recording = False self._timeout = timeout Script.__init__(self, name, settings, instruments, log_function= log_function, data_path = data_path) self.sweeper = self.instruments['zihf2']['instance'].daq.sweep(self._timeout) self.sweeper.set('sweep/device', self.instruments['zihf2']['instance'].device) self.data = deque() # todo: clean this up! and plot data in gui! self._sweep_values = list({'frequency' : [], 'x' : [], 'y' : [], 'phase': [], 'r':[]}.keys())
def __init__(self, scripts, name=None, settings=None, log_function=None, timeout=1000000000, data_path=None): Script.__init__(self, name, scripts=scripts, settings=settings, log_function=log_function, data_path=data_path)
def __init__(self, scripts, name=None, settings=None, log_function=None, data_path=None): ''' Initializes GalvoScan script for use in gui Args: instruments: list of instrument objects name: name to give to instantiated script object settings: dictionary of new settings to pass in to override defaults log_function: log function passed from the gui to direct log calls to the gui log data_path: path to save data ''' self._DEFAULT_SETTINGS = self._DEFAULT_SETTINGS + GalvoScanGeneric._DEFAULT_SETTINGS Script.__init__(self, name, settings=settings, scripts=scripts, log_function=log_function, data_path = data_path)
def __init__(self, instruments = None, name = None, settings = None, scripts = None, log_function = None, data_path = None): Script.__init__(self, name, settings = settings, instruments = instruments, scripts = scripts, log_function= log_function, data_path = data_path) self.data = {'baseline_image': [], 'baseline_extent':[], 'new_image': [], 'new_image_extent': [], 'initial_galvo_position':[], 'shift': [], 'correlation_image': [] } self.baseline_processed_image = self.data['baseline_image'] self.new_processed_image = self.data['new_image'] self.count_executions = 0 # counts how often the script has been updated
def __init__(self, instruments=None, name=None, settings=None, log_function=None, data_path=None): """ Default script initialization """ Script.__init__(self, name, settings=settings, instruments=instruments, log_function=log_function, data_path=data_path)
def __init__(self, scripts, instruments = None, name = None, settings = None, log_function = None, data_path = None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ self.scan_label = 'Piezo Voltage [V]' try: Script.__init__(self, name, settings, instruments, scripts, log_function= log_function, data_path = data_path) except: import sys import traceback exc_type, exc_value, exc_traceback = sys.exc_info() print("*** print_exception:") traceback.print_exception(exc_type, exc_value, exc_traceback, limit=2, file=sys.stdout)
def __init__(self, instruments=None, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Select points by clicking on an image """ Script.__init__(self, name, settings=settings, instruments=instruments, scripts=scripts, log_function=log_function, data_path=data_path) self.last_execution = None
def __init__(self, scripts, name=None, settings=None, log_function=None, data_path=None): """ Default script initialization """ Script.__init__(self, name, scripts=scripts, settings=settings, log_function=log_function, data_path=data_path) self.iterator_type = self.get_iterator_type(self.settings, scripts) self._current_subscript_stage = None self._skippable = True
def __init__(self, instruments=None, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Select points by clicking on an image """ Script.__init__(self, name, settings=settings, instruments=instruments, scripts=scripts, log_function=log_function, data_path=data_path) self.text = [] self.patch_collection = None self.plot_settings = {}
def __init__(self, instruments, name=None, settings=None, log_function=None, data_path=None): """ Example of a script that makes use of an instrument Args: instruments: instruments the script will make use of name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ # call init of superclass Script.__init__(self, name, settings, instruments, log_function=log_function, data_path=data_path)
def __init__(self, instruments, scripts=None, name=None, settings=None, log_function=None, data_path=None): Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path=data_path) # defines which daqs contain the input and output based on user selection of daq interface if self.settings['daq_type'] == 'PCI': self.daq_in = self.instruments['NI6259']['instance'] self.daq_out = self.instruments['NI6259']['instance'] elif self.settings['daq_type'] == 'cDAQ': self.daq_in = self.instruments['NI9402']['instance'] self.daq_out = self.instruments['NI9263']['instance']
def __init__(self, instruments, name=None, settings=None, log_function=None, data_path=None): ''' Initializes GalvoScan script for use in gui Args: instruments: list of instrument objects name: name to give to instantiated script object settings: dictionary of new settings to pass in to override defaults log_function: log function passed from the gui to direct log calls to the gui log data_path: path to save data ''' Script.__init__(self, name, settings=settings, instruments=instruments, log_function=log_function, data_path=data_path)
def __init__(self, instruments=None, scripts=None, name=None, settings=None, log_function=None, data_path=None): """ Example of a script that emits a QT signal for the gui Args: name (optional): name of script, if empty same as class name settings (optional): settings for this script, if empty same as default settings """ Script.__init__(self, name, settings=settings, instruments=instruments, scripts=scripts, log_function=log_function, data_path=data_path) if self.settings['daq_type'] == 'PCI': self.daq_out = self.instruments['NI6259_laser_power']['instance'] elif self.settings['daq_type'] == 'cDAQ': self.daq_out = self.instruments['NI9263_laser_power']['instance']
def __init__(self, instruments, scripts = None, name=None, settings=None, log_function=None, data_path = None): Script.__init__(self, name, settings=settings, scripts=scripts, instruments=instruments, log_function=log_function, data_path = data_path)
def __init__(self, scripts, name = None, settings = None, log_function = None, timeout = 1000000000, data_path = None): Script.__init__(self, name, scripts = scripts, settings=settings, log_function=log_function, data_path = data_path)