def setUpContainer(self):
""" Return the test Units to read/write """
ut = Units(name='UnitsTest',
description='a simple table for testing Units')
ut.add_unit(spike_times=[0, 1, 2],
obs_intervals=[[0, 1], [2, 3]],
waveform_mean=[1., 2., 3.],
waveform_sd=[4., 5., 6.])
ut.add_unit(spike_times=[3, 4, 5],
obs_intervals=[[2, 5], [6, 7]],
waveform_mean=[1., 2., 3.],
waveform_sd=[4., 5., 6.])
ut.waveform_rate = 40000.
ut.resolution = 1 / 40000
return ut
def setUpContainer(self):
""" Return the test Units to read/write """
ut = Units(name='UnitsTest',
description='a simple table for testing Units')
ut.add_unit(
spike_times=[0, 1, 2],
obs_intervals=[[0, 1], [2, 3]],
waveform_mean=[1., 2., 3.],
waveform_sd=[4., 5., 6.],
waveforms=[
[ # elec 1
[1, 2, 3], [1, 2, 3], [1, 2, 3]
],
[ # elec 2
[1, 2, 3], [1, 2, 3], [1, 2, 3]
]
])
ut.add_unit(
spike_times=[3, 4, 5],
obs_intervals=[[2, 5], [6, 7]],
waveform_mean=[1., 2., 3.],
waveform_sd=[4., 5., 6.],
waveforms=np.array([
[ # elec 1
[1, 2, 3], # spike 1, [sample 1, sample 2, sample 3]
[1, 2, 3], # spike 2
[1, 2, 3], # spike 3
[1, 2, 3] # spike 4
],
[ # elec 2
[1, 2, 3], # spike 1
[1, 2, 3], # spike 2
[1, 2, 3], # spike 3
[1, 2, 3] # spike 4
],
[ # elec 3
[1, 2, 3], # spike 1
[1, 2, 3], # spike 2
[1, 2, 3], # spike 3
[1, 2, 3] # spike 4
]
]))
ut.waveform_rate = 40000.
ut.resolution = 1 / 40000
return ut