def fispact_deserialize(self, filerecord, interval):
self.__init__()
substring = filerecord[interval]
dose_string = pf.first(datadump=substring,
headertag=DOSE_RATE_HEADER,
starttag=DOSE_RATE_HEADER,
endtag=')',
ignores=DOSE_RATE_IGNORES,
asstring=True)
if 'PLANE' in dose_string:
self.type = 'PLANE SOURCE'
elif 'POINT' in dose_string:
self.type = 'POINT SOURCE'
# Mass is always in grams and is actually always 1 g
# but read it in to verify
self.mass = first_value_from_line(dose_string, '') * 1e-3
# Distance is always in meters but is written without a space so
# we must strip it off
floatstr = strings_from_line(dose_string,
'SOURCE')[-1].replace('m', '')
self.distance = getfloat(floatstr)
self.dose = pf.first(datadump=substring,
headertag=DOSE_RATE_HEADER,
starttag='IS',
endtag='Sieverts/hour',
ignores=DOSE_RATE_IGNORES,
asstring=False)
def test_first(self):
self.assertEqual(pf.first(self.teststr, 'This', '', asstring=True), 'This is a line.')
self.assertTrue(self._isnotfound(pf.first(self.teststr, 'This', '', asstring=False)))
self.assertEqual(pf.first(self.teststr, 'This', 'This', asstring=True), 'is a line.')
self.assertTrue(self._isnotfound(pf.first(self.teststr, 'This', 'This', asstring=False)))
self.assertEqual(pf.first(self.teststr, 'This', 'This is ', asstring=True), 'a line.')
self.assertTrue(self._isnotfound(pf.first(self.teststr, 'This', 'This is ', asstring=False)))
self.assertEqual(pf.first(self.teststr, 'This', 'Here', asstring=True),
'are some values 3.4, 88.93e7 and -0.83324e-5 with some text. (738.9)')
self.assertEqual(pf.first(self.teststr, 'This', 'Here', asstring=False), 3.4)
self.assertEqual(pf.first(self.teststr, 'This', 'Here', ignores=['3.4,'], asstring=False), 88.93e7)
def get_value(starttag, endtag):
return pf.first(datadump=substring,
headertag=TIME_STEP_HEADER,
starttag=starttag,
endtag=endtag,
ignores=TIME_STEP_IGNORES,
asstring=False)
def nr_of_nuclides():
number = pf.first(datadump=substring,
headertag=NUCLIDES_HEADER,
starttag=nuclidetag,
endtag='',
ignores=NUCLIDES_IGNORES,
asstring=False)
return int(number)
def nr_of_nuclides():
number = pf.first(datadump=substring,
headertag=NUCLIDES_HEADER,
starttag=nuclidetag,
endtag='',
ignores=NUCLIDES_IGNORES,
asstring=False)
return int(number)
def _process(self):
for i in range(0, len(self)):
t = self.lineindices[i]
nt = -1
if i < len(self.lineindices) - 1:
nt = self.lineindices[i + 1]
interval = int(
pf.first(datadump=self.cachedlines[t:nt],
headertag=TIME_STEP_HEADER,
starttag=TIME_STEP_HEADER,
endtag='',
ignores=[],
asstring=False))
irrad_time = pf.first(datadump=self.cachedlines[t:nt],
headertag=TIME_STEP_HEADER,
starttag=IRRAD_TIME_TAG,
endtag='SECS',
ignores=[],
asstring=False)
cool_time = pf.first(datadump=self.cachedlines[t:nt],
headertag=TIME_STEP_HEADER,
starttag=COOLING_TIME_TAG,
endtag='SECS',
ignores=[],
asstring=False)
self.timesteps.append((interval, self.cachedlines[t:nt]))
self.irradiation_times.append(irrad_time)
self.cooling_times.append(cool_time)
if irrad_time == 0.0:
irrad_time = cool_time
self.times.append(irrad_time)
# turn them into cumulative values
self.irradiation_times = list(accumulate(self.irradiation_times))
self.cooling_times = list(accumulate(self.cooling_times))
assert len(self.irradiation_times) == len(self.cooling_times)
def _process(self):
for i in range(0, len(self)):
t = self.lineindices[i]
nt = -1
if i < len(self.lineindices) - 1:
nt = self.lineindices[i+1]
interval = int(pf.first(datadump=self.cachedlines[t:nt],
headertag=TIME_STEP_HEADER,
starttag=TIME_STEP_HEADER,
endtag='',
ignores=[],
asstring=False))
irrad_time = pf.first(datadump=self.cachedlines[t:nt],
headertag=TIME_STEP_HEADER,
starttag=IRRAD_TIME_TAG,
endtag='SECS',
ignores=[],
asstring=False)
cool_time = pf.first(datadump=self.cachedlines[t:nt],
headertag=TIME_STEP_HEADER,
starttag=COOLING_TIME_TAG,
endtag='SECS',
ignores=[],
asstring=False)
self.timesteps.append((interval, self.cachedlines[t:nt]))
self.irradiation_times.append(irrad_time)
self.cooling_times.append(cool_time)
if irrad_time == 0.0:
irrad_time = cool_time
self.times.append(irrad_time)
# turn them into cumulative values
self.irradiation_times = list(accumulate(self.irradiation_times))
self.cooling_times = list(accumulate(self.cooling_times))
assert len(self.irradiation_times) == len(self.cooling_times)
def fispact_deserialize(self, filerecord):
self.__init__()
self.timestamp = pf.first(datadump=filerecord.cachedlines,
headertag='THIS RUN',
starttag='timestamp:',
endtag='',
ignores=RUN_DATA_IGNORES,
asstring=True)
self.run_name = pf.first(datadump=filerecord.cachedlines,
headertag='THIS RUN',
starttag='FISPACT title:',
endtag='',
ignores=RUN_DATA_IGNORES,
asstring=True)
self.flux_name = pf.first(datadump=filerecord.cachedlines,
headertag='INITIAL CROSS SECTION DATA',
starttag='FLUX file label:',
endtag='',
ignores=RUN_DATA_IGNORES,
asstring=True)
def fispact_deserialize(self, filerecord, interval):
# reset to defaults before reading
self.__init__(ignorenuclides=self.__ignorenuclides)
substring = filerecord[interval]
if substring:
self.irradiation_time = filerecord.cumulirradiationtime(interval)
self.cooling_time = filerecord.cumulcoolingtime(interval)
def get_value(starttag, endtag):
return pf.first(datadump=substring,
headertag=TIME_STEP_HEADER,
starttag=starttag,
endtag=endtag,
ignores=TIME_STEP_IGNORES,
asstring=False)
self.flux = get_value(starttag='* * * FLUX AMP IS',
endtag='/cm^2/s')
self.alpha_heat = get_value(starttag='TOTAL ALPHA HEAT PRODUCTION',
endtag='kW')
self.beta_heat = get_value(starttag='TOTAL BETA HEAT PRODUCTION',
endtag='kW')
self.gamma_heat = get_value(starttag='TOTAL GAMMA HEAT PRODUCTION',
endtag='kW')
self.total_heat = self.alpha_heat + self.beta_heat + self.gamma_heat
self.initial_mass = get_value(
starttag='0 INITIAL TOTAL MASS OF MATERIAL', endtag='kg')
self.total_mass = get_value(starttag='0 TOTAL MASS OF MATERIAL',
endtag='kg')
self.number_of_fissions = get_value(starttag='NUMBER OF FISSIONS',
endtag='BURN-UP')
self.burnup = get_value(starttag='BURN-UP OF ACTINIDES',
endtag='%')
self.ingestion_dose = get_value(
starttag='INGESTION HAZARD FOR ALL MATERIALS', endtag='Sv/kg')
self.inhalation_dose = get_value(
starttag='INHALATION HAZARD FOR ALL MATERIALS', endtag='Sv/kg')
self.alpha_activity = get_value(starttag='ALPHA BECQUERELS =',
endtag='BETA')
self.beta_activity = get_value(starttag='BETA BECQUERELS =',
endtag='GAMMA')
self.gamma_activity = get_value(starttag='GAMMA BECQUERELS =',
endtag='')
self.total_activity = get_value(
starttag='TOTAL ACTIVITY FOR ALL MATERIALS', endtag='Bq')
self.total_activity_exclude_trit = get_value(
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM', endtag='Bq')
self.dose_rate.fispact_deserialize(filerecord, interval)
self.gamma_spectrum.fispact_deserialize(filerecord, interval)
self.total_displacement_rate = pf.first(
datadump=substring,
headertag="Total Displacement Rate (n,Dtot ) =",
starttag="Displacements/sec =",
endtag="Displacements Per Atom/sec =",
ignores=TIME_STEP_IGNORES,
asstring=False)
self.duration = filerecord.times[interval - 1]
# for fission this can be very large and hence very slow
# if you do not care about the nuclides then we can set
# it to ignore nuclides
if not self.__ignorenuclides:
t = Nuclides()
t.fispact_deserialize(filerecord, interval)
self.nuclides = t.nuclides
def test_from_file(self):
# test some values from the output file
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='THIS RUN',
starttag='timestamp:',
endtag='',
ignores=['\n', '|'],
asstring=True), '12:35:22 13 January 2018')
self.assertEqual(pf.last(datadump=self.file_as_string,
headertag='THIS RUN',
starttag='timestamp:',
endtag='',
ignores=['\n', '|'],
asstring=True), '12:35:22 13 January 2018')
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='INITIAL CROSS SECTION DATA',
starttag='FLUX file label:',
endtag='',
ignores=['\n', '|'],
asstring=True), 'FBR-Na End of Cycle heavy fuel s')
self.assertEqual(pf.last(datadump=self.file_as_string,
headertag='INITIAL CROSS SECTION DATA',
starttag='FLUX file label:',
endtag='',
ignores=['\n', '|'],
asstring=True), 'FBR-Na End of Cycle heavy fuel s')
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='* * * TIME INTERVAL',
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM',
endtag='',
ignores=['\n', '|'],
asstring=True), '1.45396E+07 Bq')
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='* * * TIME INTERVAL',
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM',
endtag='Bq',
ignores=['\n', '|'],
asstring=True), '1.45396E+07')
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='* * * TIME INTERVAL',
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM',
endtag='',
ignores=['\n', '|'],
asstring=False), 1.45396E+07)
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='* * * TIME INTERVAL',
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM',
endtag='Bq',
ignores=['\n', '|'],
asstring=False), 1.45396E+07)
self.assertEqual(pf.last(datadump=self.file_as_string,
headertag='* * * TIME INTERVAL',
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM',
endtag='',
ignores=['\n', '|'],
asstring=True), '4.11578E+07 Bq')
self.assertEqual(pf.last(datadump=self.file_as_string,
headertag='* * * TIME INTERVAL',
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM',
endtag='Bq',
ignores=['\n', '|'],
asstring=True), '4.11578E+07')
self.assertEqual(pf.last(datadump=self.file_as_string,
headertag='* * * TIME INTERVAL',
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM',
endtag='',
ignores=['\n', '|'],
asstring=False), 4.11578E+07)
self.assertEqual(pf.last(datadump=self.file_as_string,
headertag='* * * TIME INTERVAL',
starttag='TOTAL ACTIVITY EXCLUDING TRITIUM',
endtag='Bq',
ignores=['\n', '|'],
asstring=False), 4.11578E+07)
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='DOSE RATE (',
starttag='IS',
endtag='',
ignores=[],
asstring=True), '2.94608E-05 Sieverts/hour ( 2.94608E-03 Rems/hour)')
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='DOSE RATE (',
starttag='IS',
endtag='Sieverts/hour',
ignores=[],
asstring=True), '2.94608E-05')
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='DOSE RATE (',
starttag='IS',
endtag='Sieverts/hour',
ignores=[],
asstring=False), 2.94608E-05)
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='DOSE RATE (',
starttag='IS',
endtag='',
ignores=[],
asstring=False), 2.94608E-05)
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='DOSE RATE (',
starttag='DOSE RATE (',
endtag='',
ignores=[],
asstring=False), 2.94608E-05)
self.assertEqual(pf.first(datadump=self.file_as_string,
headertag='DOSE RATE (',
starttag='DOSE RATE (',
endtag='',
ignores=['2.94608E-05'],
asstring=False), 2.94608E-03)
