def run_partly(self, chunksize): tree = BTree(chunksize, None, None) items_since_last_group = 0 last_key = None for k, v in self._generate_input(): if self._check_stop(): return if k in tree: tree[k].append(v) else: tree[k] = [v] self.processed += 1 items_since_last_group += 1 if items_since_last_group >= (chunksize*self.num_workers) and k != last_key: #only output elements periodically and once key changes keyleafs = [l for l in tree.get_leafs()] for key, leaf in keyleafs: for k, v in zip(leaf.keys, leaf.values): self._output((k,v)) tree = BTree(chunksize, None, None) items_since_last_group = 0 last_key = k keyleafs = [l for l in tree.get_leafs()] for key, leaf in keyleafs: for k, v in zip(leaf.keys, leaf.values): self._output((k,v))
def run(self, chunksize=10): tree = BTree(chunksize, None, None) for k, v in self._generate_input(): if self._check_stop(): return if k in tree: tree[k] = self.reduce_func(tree[k], v) else: tree[k] = v self.processed += 1 keyleafs = [l for l in tree.get_leafs()] for key, leaf in keyleafs: for k, v in zip(leaf.keys, leaf.values): self._output((k,v))
def run(self, chunksize=10): tree = BTree(chunksize, None, None) for k, v in self._generate_input(): if self._check_stop(): return if k in tree: tree[k] = self.reduce_func(tree[k], v) else: tree[k] = v self.processed += 1 keyleafs = [l for l in tree.get_leafs()] for key, leaf in keyleafs: for k, v in zip(leaf.keys, leaf.values): self._output((k,v))
def test_persistent(self):
#load with numbers
numbers = [x for x in range(1, 1000)]
random.shuffle(numbers)
for number in numbers:
self.btree.insert(IntClass(number), IntClass(100 + number))
#serialize and deserialize again
treejson = self.btree.to_JSON()
self.leaffactory = BTreeFileLeafFactory(
os.path.join(self.tempdir, "page"), ".index")
self.btree = BTree.from_JSON(treejson, IntClass, IntClass,
self.leaffactory)
#check for numbers
for number in numbers:
leaf = self.btree.root.search(IntClass(number))
leaf.ensure_load()
self.assertIn(number, [key.integer for key in leaf.keys])
self.assertGreater(len(self.leaffactory.allocated_leaves), 2)
#test delete to check if parent correctly set on all nodes and tree works
random.shuffle(numbers)
for number in numbers:
leaf = self.btree.root.search(IntClass(number))
leaf.ensure_load()
self.assertIn(number, [
key.integer
for key in self.btree.root.search(IntClass(number)).keys
])
self.assertIn(100 + number, [
value.integer
for value in self.btree.root.search(IntClass(number)).values
])
self.btree.remove(IntClass(number))
leaf = self.btree.root.search(IntClass(number))
leaf.ensure_load()
self.assertNotIn(number, [
key.integer
for key in self.btree.root.search(IntClass(number)).keys
])
self.assertNotIn(100 + number, [
value.integer
for value in self.btree.root.search(IntClass(number)).values
])
self.leaffactory.cleanup()
self.assertEqual(0, len(self.btree.root))
self.assertEqual([], self.btree.root.childs[0].keys)
self.assertEqual([], self.btree.root.childs[0].values)
self.assertEqual(1, len(self.leaffactory.allocated_leaves))
def run(self, chunksize=10): if self.partly: return self.run_partly(chunksize) tree = BTree(chunksize, None, None) for k, v in self._generate_input(): if self._check_stop(): return if k in tree: tree[k].append(v) else: tree[k] = [v] self.processed += 1 keyleafs = [l for l in tree.get_leafs()] for key, leaf in keyleafs: for k, v in zip(leaf.keys, leaf.values): self._output((k,v))
def run(self, chunksize=10): if self.partly: return self.run_partly(chunksize) tree = BTree(chunksize, None, None) for k, v in self._generate_input(): if self._check_stop(): return if k in tree: tree[k].append(v) else: tree[k] = [v] self.processed += 1 keyleafs = [l for l in tree.get_leafs()] for key, leaf in keyleafs: for k, v in zip(leaf.keys, leaf.values): self._output((k,v))
def run_partly(self, chunksize): tree = BTree(chunksize, None, None) items_since_last_group = 0 last_key = None for k, v in self._generate_input(): if self._check_stop(): return if k in tree: tree[k].append(v) else: tree[k] = [v] self.processed += 1 items_since_last_group += 1 if items_since_last_group >= (chunksize*self.num_workers) and k != last_key: #only output elements periodically and once key changes keyleafs = [l for l in tree.get_leafs()] for key, leaf in keyleafs: for k, v in zip(leaf.keys, leaf.values): self._output((k,v)) tree = BTree(chunksize, None, None) items_since_last_group = 0 last_key = k keyleafs = [l for l in tree.get_leafs()] for key, leaf in keyleafs: for k, v in zip(leaf.keys, leaf.values): self._output((k,v))
def test_persistent(self):
# load with numbers
numbers = [x for x in range(1, 1000)]
random.shuffle(numbers)
for number in numbers:
self.btree.insert(IntClass(number), IntClass(100 + number))
# serialize and deserialize again
treejson = self.btree.to_JSON()
self.leaffactory = BTreeFileLeafFactory(os.path.join(self.tempdir, "page"), ".index")
self.btree = BTree.from_JSON(treejson, IntClass, IntClass, self.leaffactory)
# check for numbers
for number in numbers:
leaf = self.btree.root.search(IntClass(number))
leaf.ensure_load()
self.assertIn(number, [key.integer for key in leaf.keys])
self.assertGreater(len(self.leaffactory.allocated_leaves), 2)
# test delete to check if parent correctly set on all nodes and tree works
random.shuffle(numbers)
for number in numbers:
leaf = self.btree.root.search(IntClass(number))
leaf.ensure_load()
self.assertIn(number, [key.integer for key in self.btree.root.search(IntClass(number)).keys])
self.assertIn(100 + number, [value.integer for value in self.btree.root.search(IntClass(number)).values])
self.btree.remove(IntClass(number))
leaf = self.btree.root.search(IntClass(number))
leaf.ensure_load()
self.assertNotIn(number, [key.integer for key in self.btree.root.search(IntClass(number)).keys])
self.assertNotIn(100 + number, [value.integer for value in self.btree.root.search(IntClass(number)).values])
self.leaffactory.cleanup()
self.assertEqual(0, len(self.btree.root))
self.assertEqual([], self.btree.root.childs[0].keys)
self.assertEqual([], self.btree.root.childs[0].values)
self.assertEqual(1, len(self.leaffactory.allocated_leaves))
def setUp(self):
self.tempdir = tempfile.mkdtemp()
self.leaffactory = BTreeFileLeafFactory(os.path.join(self.tempdir, "page"), ".index")
self.btree = BTree(50, IntClass, IntClass, self.leaffactory)
def setUp(self):
self.btree = BTree(3, int, int)
class TestBTree(unittest.TestCase):
def setUp(self):
self.btree = BTree(3, int, int)
def tearDown(self):
pass
def test_insert(self):
self.btree.insert(1, 101)
self.assertEquals(1, self.btree.root.childs[0].keys[0])
self.assertEquals(101, self.btree.root.childs[0].values[0])
self.btree.insert(2, 102)
self.assertEqual(1, self.btree.root.childs[0].keys[0])
self.assertEqual(101, self.btree.root.childs[0].values[0])
self.assertEqual(2, self.btree.root.childs[0].keys[1])
self.assertEqual(102, self.btree.root.childs[0].values[1])
self.btree.insert(3, 103)
self.assertEqual([1, 2, 3], self.btree.root.childs[0].keys)
self.assertEqual([101, 102, 103], self.btree.root.childs[0].values)
self.btree.insert(4, 104)
self.assertEqual([1, 2], self.btree.root.childs[0].keys)
self.assertEqual([101, 102], self.btree.root.childs[0].values)
self.assertEqual([3, 4], self.btree.root.childs[1].keys)
self.assertEqual([103, 104], self.btree.root.childs[1].values)
self.assertEqual([3], self.btree.root.keys)
numbers = [x for x in range(5, 100)]
random.shuffle(numbers)
for number in numbers:
self.btree.insert(number, 100 + number)
for number in numbers:
self.assertIn(number, self.btree.root.search(number).keys)
self.assertIn(100 + number, self.btree.root.search(number).values)
def test_remove(self):
# insert
numbers = [x for x in range(1, 1000)]
# numbers = [4, 13, 2, 12, 9, 10, 8, 1, 6, 5, 3, 7, 11, 14]
random.shuffle(numbers)
for number in numbers:
self.btree.insert(number, 100 + number)
# test delete
random.shuffle(numbers)
# numbers = [10,6,14,12,9,4,5,3,1,13,8,11,2,7]
for number in numbers:
self.assertIn(number, self.btree.root.search(number).keys)
self.assertIn(100 + number, self.btree.root.search(number).values)
self.btree.remove(number)
self.assertNotIn(number, self.btree.root.search(number).keys)
self.assertNotIn(100 + number, self.btree.root.search(number).values)
self.assertEqual(0, len(self.btree.root))
self.assertEqual([], self.btree.root.childs[0].keys)
self.assertEqual([], self.btree.root.childs[0].values)
def setUp(self):
self.btree = BTree(3, int, int)
class TestBTree(unittest.TestCase):
def setUp(self):
self.btree = BTree(3, int, int)
def tearDown(self):
pass
def test_insert(self):
self.btree.insert(1, 101)
self.assertEqual(1, self.btree.root.childs[0].keys[0])
self.assertEqual(101, self.btree.root.childs[0].values[0])
self.btree.insert(2, 102)
self.assertEqual(1, self.btree.root.childs[0].keys[0])
self.assertEqual(101, self.btree.root.childs[0].values[0])
self.assertEqual(2, self.btree.root.childs[0].keys[1])
self.assertEqual(102, self.btree.root.childs[0].values[1])
self.btree.insert(3, 103)
self.assertEqual([1, 2, 3], self.btree.root.childs[0].keys)
self.assertEqual([101, 102, 103], self.btree.root.childs[0].values)
self.btree.insert(4, 104)
self.assertEqual([1, 2], self.btree.root.childs[0].keys)
self.assertEqual([101, 102], self.btree.root.childs[0].values)
self.assertEqual([3, 4], self.btree.root.childs[1].keys)
self.assertEqual([103, 104], self.btree.root.childs[1].values)
self.assertEqual([3], self.btree.root.keys)
numbers = [x for x in range(5, 100)]
random.shuffle(numbers)
for number in numbers:
self.btree.insert(number, 100 + number)
for number in numbers:
self.assertIn(number, self.btree.root.search(number).keys)
self.assertIn(100 + number, self.btree.root.search(number).values)
def test_remove(self):
#insert
numbers = [x for x in range(1, 1000)]
#numbers = [4, 13, 2, 12, 9, 10, 8, 1, 6, 5, 3, 7, 11, 14]
random.shuffle(numbers)
for number in numbers:
self.btree.insert(number, 100 + number)
#test delete
random.shuffle(numbers)
#numbers = [10,6,14,12,9,4,5,3,1,13,8,11,2,7]
for number in numbers:
self.assertIn(number, self.btree.root.search(number).keys)
self.assertIn(100 + number, self.btree.root.search(number).values)
self.btree.remove(number)
self.assertNotIn(number, self.btree.root.search(number).keys)
self.assertNotIn(100 + number,
self.btree.root.search(number).values)
self.assertEqual(0, len(self.btree.root))
self.assertEqual([], self.btree.root.childs[0].keys)
self.assertEqual([], self.btree.root.childs[0].values)
def setUp(self):
self.tempdir = tempfile.mkdtemp()
self.leaffactory = BTreeFileLeafFactory(
os.path.join(self.tempdir, "page"), ".index")
self.btree = BTree(50, IntClass, IntClass, self.leaffactory)