def read_single_udf(pickleSer, infile, eval_type, runner_conf, udf_index):
num_arg = read_int(infile)
arg_offsets = [read_int(infile) for i in range(num_arg)]
row_func = None
for i in range(read_int(infile)):
f, return_type = read_command(pickleSer, infile)
if row_func is None:
row_func = f
else:
row_func = chain(row_func, f)
# make sure StopIteration's raised in the user code are not ignored
# when they are processed in a for loop, raise them as RuntimeError's instead
func = fail_on_stopiteration(row_func)
# the last returnType will be the return type of UDF
if eval_type == PythonEvalType.SQL_SCALAR_PANDAS_UDF:
return arg_offsets, wrap_scalar_pandas_udf(func, return_type)
elif eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
argspec = _get_argspec(row_func) # signature was lost when wrapping it
return arg_offsets, wrap_grouped_map_pandas_udf(func, return_type, argspec, runner_conf)
elif eval_type == PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF:
return arg_offsets, wrap_grouped_agg_pandas_udf(func, return_type)
elif eval_type == PythonEvalType.SQL_WINDOW_AGG_PANDAS_UDF:
return arg_offsets, wrap_window_agg_pandas_udf(func, return_type, runner_conf, udf_index)
elif eval_type == PythonEvalType.SQL_BATCHED_UDF:
return arg_offsets, wrap_udf(func, return_type)
else:
raise ValueError("Unknown eval type: {}".format(eval_type))
def read_udfs(pickleSer, infile, eval_type):
runner_conf = {}
if eval_type in (PythonEvalType.SQL_SCALAR_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF,
PythonEvalType.SQL_WINDOW_AGG_PANDAS_UDF):
# Load conf used for pandas_udf evaluation
num_conf = read_int(infile)
for i in range(num_conf):
k = utf8_deserializer.loads(infile)
v = utf8_deserializer.loads(infile)
runner_conf[k] = v
# NOTE: if timezone is set here, that implies respectSessionTimeZone is True
timezone = runner_conf.get("spark.sql.session.timeZone", None)
ser = ArrowStreamPandasSerializer(timezone)
else:
ser = BatchedSerializer(PickleSerializer(), 100)
num_udfs = read_int(infile)
udfs = {}
call_udf = []
mapper_str = ""
if eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
# Create function like this:
# lambda a: f([a[0]], [a[0], a[1]])
# We assume there is only one UDF here because grouped map doesn't
# support combining multiple UDFs.
assert num_udfs == 1
# See FlatMapGroupsInPandasExec for how arg_offsets are used to
# distinguish between grouping attributes and data attributes
arg_offsets, udf = read_single_udf(
pickleSer, infile, eval_type, runner_conf, udf_index=0)
udfs['f'] = udf
split_offset = arg_offsets[0] + 1
arg0 = ["a[%d]" % o for o in arg_offsets[1: split_offset]]
arg1 = ["a[%d]" % o for o in arg_offsets[split_offset:]]
mapper_str = "lambda a: f([%s], [%s])" % (", ".join(arg0), ", ".join(arg1))
else:
# Create function like this:
# lambda a: (f0(a[0]), f1(a[1], a[2]), f2(a[3]))
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(
pickleSer, infile, eval_type, runner_conf, udf_index=i)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
# profiling is not supported for UDF
return func, None, ser, ser
def main():
split_index = read_int(sys.stdin)
spark_files_dir = load_pickle(read_with_length(sys.stdin))
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
sys.path.append(spark_files_dir)
num_broadcast_variables = read_int(sys.stdin)
for _ in range(num_broadcast_variables):
bid = read_long(sys.stdin)
value = read_with_length(sys.stdin)
_broadcastRegistry[bid] = Broadcast(bid, load_pickle(value))
func = load_obj()
bypassSerializer = load_obj()
if bypassSerializer:
dumps = lambda x: x
else:
dumps = dump_pickle
iterator = read_from_pickle_file(sys.stdin)
try:
for obj in func(split_index, iterator):
write_with_length(dumps(obj), old_stdout)
except Exception as e:
write_int(-2, old_stdout)
write_with_length(traceback.format_exc(), old_stdout)
sys.exit(-1)
# Mark the beginning of the accumulators section of the output
write_int(-1, old_stdout)
for aid, accum in _accumulatorRegistry.items():
write_with_length(dump_pickle((aid, accum._value)), old_stdout)
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
return
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
sys.path.append(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
sys.path.append(os.path.join(spark_files_dir, filename))
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
ser = CompressedSerializer(pickleSer)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
value = ser._read_with_length(infile)
_broadcastRegistry[bid] = Broadcast(bid, value)
else:
bid = - bid - 1
_broadcastRegistry.remove(bid)
_accumulatorRegistry.clear()
command = pickleSer._read_with_length(infile)
(func, deserializer, serializer) = command
init_time = time.time()
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc(), outfile)
outfile.flush()
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print >> sys.stderr, "PySpark worker failed with exception:"
print >> sys.stderr, traceback.format_exc()
exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
def read_single_udf(pickleSer, infile):
num_arg = read_int(infile)
arg_offsets = [read_int(infile) for i in range(num_arg)]
row_func = None
for i in range(read_int(infile)):
f, return_type = read_command(pickleSer, infile)
if row_func is None:
row_func = f
else:
row_func = chain(row_func, f)
# the last returnType will be the return type of UDF
return arg_offsets, wrap_udf(row_func, return_type)
def read_single_udf(pickleSer, infile, eval_type):
num_arg = read_int(infile)
arg_offsets = [read_int(infile) for i in range(num_arg)]
row_func = None
for i in range(read_int(infile)):
f, return_type = read_command(pickleSer, infile)
if row_func is None:
row_func = f
else:
row_func = chain(row_func, f)
# the last returnType will be the return type of UDF
if eval_type == PythonEvalType.SQL_PANDAS_UDF:
return arg_offsets, wrap_pandas_udf(row_func, return_type)
else:
return arg_offsets, wrap_udf(row_func, return_type)
def do_termination_test(self, terminator):
from subprocess import Popen, PIPE
from errno import ECONNREFUSED
# start daemon
daemon_path = os.path.join(os.path.dirname(__file__), "daemon.py")
daemon = Popen([sys.executable, daemon_path], stdin=PIPE, stdout=PIPE)
# read the port number
port = read_int(daemon.stdout)
# daemon should accept connections
self.assertTrue(self.connect(port))
# request shutdown
terminator(daemon)
time.sleep(1)
# daemon should no longer accept connections
try:
self.connect(port)
except EnvironmentError as exception:
self.assertEqual(exception.errno, ECONNREFUSED)
else:
self.fail("Expected EnvironmentError to be raised")
def main():
split_index = read_int(sys.stdin)
num_broadcast_variables = read_int(sys.stdin)
for _ in range(num_broadcast_variables):
bid = read_long(sys.stdin)
value = read_with_length(sys.stdin)
_broadcastRegistry[bid] = Broadcast(bid, load_pickle(value))
func = load_obj()
bypassSerializer = load_obj()
if bypassSerializer:
dumps = lambda x: x
else:
dumps = dump_pickle
iterator = read_from_pickle_file(sys.stdin)
for obj in func(split_index, iterator):
write_with_length(dumps(obj), old_stdout)
def read_udfs(pickleSer, infile, eval_type):
num_udfs = read_int(infile)
udfs = {}
call_udf = []
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(pickleSer, infile, eval_type)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
# Create function like this:
# lambda a: (f0(a0), f1(a1, a2), f2(a3))
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
if eval_type in (PythonEvalType.SQL_SCALAR_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF):
timezone = utf8_deserializer.loads(infile)
ser = ArrowStreamPandasSerializer(timezone)
else:
ser = BatchedSerializer(PickleSerializer(), 100)
# profiling is not supported for UDF
return func, None, ser, ser
def main(infile, outfile):
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
return
# fetch name of workdir
spark_files_dir = load_pickle(read_with_length(infile))
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
value = read_with_length(infile)
_broadcastRegistry[bid] = Broadcast(bid, load_pickle(value))
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
sys.path.append(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
sys.path.append(os.path.join(spark_files_dir, load_pickle(read_with_length(infile))))
# now load function
func = load_obj(infile)
bypassSerializer = load_obj(infile)
if bypassSerializer:
dumps = lambda x: x
else:
dumps = dump_pickle
init_time = time.time()
iterator = read_from_pickle_file(infile)
try:
for obj in func(split_index, iterator):
write_with_length(dumps(obj), outfile)
except Exception as e:
write_int(-2, outfile)
write_with_length(traceback.format_exc(), outfile)
sys.exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
# Mark the beginning of the accumulators section of the output
write_int(-1, outfile)
for aid, accum in _accumulatorRegistry.items():
write_with_length(dump_pickle((aid, accum._value)), outfile)
write_int(-1, outfile)
def _read_vec(stream):
vector_length = read_int(stream)
vector = np.empty(vector_length)
# TODO: maybe some optimized way to read this all at once?
for i in xrange(vector_length):
vector[i] = struct.unpack('!d', stream.read(8))[0]
return vector
def handle(self):
from pyspark.accumulators import _accumulatorRegistry
num_updates = read_int(self.rfile)
for _ in range(num_updates):
(aid, update) = load_pickle(read_with_length(self.rfile))
_accumulatorRegistry[aid] += update
# Write a byte in acknowledgement
self.wfile.write(struct.pack("!b", 1))
def accum_updates():
num_updates = read_int(self.rfile)
for _ in range(num_updates):
(aid, update) = pickleSer._read_with_length(self.rfile)
_accumulatorRegistry[aid] += update
# Write a byte in acknowledgement
self.wfile.write(struct.pack("!b", 1))
return False
def func(event):
headersBytes = BytesIO(event[0]) if sys.version >= "3" else StringIO(event[0])
headers = {}
strSer = UTF8Deserializer()
for i in range(0, read_int(headersBytes)):
key = strSer.loads(headersBytes)
value = strSer.loads(headersBytes)
headers[key] = value
body = bodyDecoder(event[1])
return (headers, body)
def main(infile, outfile):
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
return
# fetch name of workdir
spark_files_dir = mutf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
value = pickleSer._read_with_length(infile)
_broadcastRegistry[bid] = Broadcast(bid, value)
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
sys.path.append(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = mutf8_deserializer.loads(infile)
sys.path.append(os.path.join(spark_files_dir, filename))
command = pickleSer._read_with_length(infile)
(func, deserializer, serializer) = command
init_time = time.time()
try:
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
except Exception as e:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc(), outfile)
sys.exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
def load_stream(self, stream):
"""
Load a stream of un-ordered Arrow RecordBatches, where the last iteration yields
a list of indices that can be used to put the RecordBatches in the correct order.
"""
# load the batches
for batch in self.serializer.load_stream(stream):
yield batch
# load the batch order indices or propagate any error that occurred in the JVM
num = read_int(stream)
if num == -1:
error_msg = UTF8Deserializer().loads(stream)
raise RuntimeError(
"An error occurred while calling "
"ArrowCollectSerializer.load_stream: {}".format(error_msg))
batch_order = []
for i in range(num):
index = read_int(stream)
batch_order.append(index)
yield batch_order
def handle(self):
from pyspark.accumulators import _accumulatorRegistry
while not self.server.server_shutdown:
# Poll every 1 second for new data -- don't block in case of shutdown.
r, _, _ = select.select([self.rfile], [], [], 1)
if self.rfile in r:
num_updates = read_int(self.rfile)
for _ in range(num_updates):
(aid, update) = pickleSer._read_with_length(self.rfile)
_accumulatorRegistry[aid] += update
# Write a byte in acknowledgement
self.wfile.write(struct.pack("!b", 1))
def handle(self):
from pyspark.accumulators import _accumulatorRegistry
while not self.server.server_shutdown:
# Poll every 1 second for new data -- don't block in case of shutdown.
r, _, _ = select.select([self.rfile], [], [], 1)
if self.rfile in r:
num_updates = read_int(self.rfile)
for _ in range(num_updates):
(aid, update) = pickleSer._read_with_length(self.rfile)
_accumulatorRegistry[aid] += update
# Write a byte in acknowledgement
self.wfile.write(struct.pack("!b", 1))
def read_single_udf(pickleSer, infile, eval_type, runner_conf, udf_index):
num_arg = read_int(infile)
arg_offsets = [read_int(infile) for i in range(num_arg)]
chained_func = None
profiler = None
for i in range(read_int(infile)):
f, return_type, profiler = read_command(pickleSer, infile)
if chained_func is None:
chained_func = f
else:
chained_func = chain(chained_func, f)
if eval_type == PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF:
func = chained_func
else:
# make sure StopIteration's raised in the user code are not ignored
# when they are processed in a for loop, raise them as RuntimeError's instead
func = fail_on_stopiteration(chained_func)
# the last returnType will be the return type of UDF
if eval_type == PythonEvalType.SQL_SCALAR_PANDAS_UDF:
return arg_offsets, wrap_scalar_pandas_udf(func, return_type), profiler
elif eval_type == PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF:
return arg_offsets, wrap_pandas_iter_udf(func, return_type), profiler
elif eval_type == PythonEvalType.SQL_MAP_PANDAS_ITER_UDF:
return arg_offsets, wrap_pandas_iter_udf(func, return_type), profiler
elif eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
argspec = _get_argspec(chained_func) # signature was lost when wrapping it
return arg_offsets, wrap_grouped_map_pandas_udf(func, return_type, argspec), profiler
elif eval_type == PythonEvalType.SQL_COGROUPED_MAP_PANDAS_UDF:
argspec = _get_argspec(chained_func) # signature was lost when wrapping it
return arg_offsets, wrap_cogrouped_map_pandas_udf(func, return_type, argspec), profiler
elif eval_type == PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF:
return arg_offsets, wrap_grouped_agg_pandas_udf(func, return_type), profiler
elif eval_type == PythonEvalType.SQL_WINDOW_AGG_PANDAS_UDF:
return arg_offsets, wrap_window_agg_pandas_udf(func, return_type, runner_conf, udf_index), profiler
elif eval_type == PythonEvalType.SQL_BATCHED_UDF:
return arg_offsets, wrap_udf(func, return_type), profiler
else:
raise ValueError("Unknown eval type: {}".format(eval_type))
def read_single_udf(pickleSer, infile, eval_type):
num_arg = read_int(infile)
arg_offsets = [read_int(infile) for i in range(num_arg)]
row_func = None
for i in range(read_int(infile)):
f, return_type = read_command(pickleSer, infile)
if row_func is None:
row_func = f
else:
row_func = chain(row_func, f)
# make sure StopIteration's raised in the user code are not ignored
# when they are processed in a for loop, raise them as RuntimeError's instead
func = fail_on_stopiteration(row_func)
# the last returnType will be the return type of UDF
if eval_type == PythonEvalType.SQL_SCALAR_PANDAS_UDF:
return arg_offsets, wrap_scalar_pandas_udf(func, return_type)
elif eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
return arg_offsets, wrap_grouped_map_pandas_udf(func, return_type)
else:
return arg_offsets, wrap_udf(func, return_type)
def read_single_udf(pickleSer, infile, eval_type):
num_arg = read_int(infile)
arg_offsets = [read_int(infile) for i in range(num_arg)]
row_func = None
for i in range(read_int(infile)):
f, return_type = read_command(pickleSer, infile)
if row_func is None:
row_func = f
else:
row_func = chain(row_func, f)
# the last returnType will be the return type of UDF
if eval_type == PythonEvalType.SQL_SCALAR_PANDAS_UDF:
return arg_offsets, wrap_scalar_pandas_udf(row_func, return_type)
elif eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
return arg_offsets, wrap_grouped_map_pandas_udf(row_func, return_type)
elif eval_type == PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF:
return arg_offsets, wrap_grouped_agg_pandas_udf(row_func, return_type)
elif eval_type == PythonEvalType.SQL_BATCHED_UDF:
return arg_offsets, wrap_udf(row_func, return_type)
else:
raise ValueError("Unknown eval type: {}".format(eval_type))
def read_single_udf(pickleSer, infile, eval_type):
num_arg = read_int(infile)
arg_offsets = [read_int(infile) for i in range(num_arg)]
row_func = None
for i in range(read_int(infile)):
f, return_type = read_command(pickleSer, infile)
if row_func is None:
row_func = f
else:
row_func = chain(row_func, f)
# the last returnType will be the return type of UDF
if eval_type == PythonEvalType.SQL_SCALAR_PANDAS_UDF:
return arg_offsets, wrap_scalar_pandas_udf(row_func, return_type)
elif eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
return arg_offsets, wrap_grouped_map_pandas_udf(row_func, return_type)
elif eval_type == PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF:
return arg_offsets, wrap_grouped_agg_pandas_udf(row_func, return_type)
elif eval_type == PythonEvalType.SQL_BATCHED_UDF:
return arg_offsets, wrap_udf(row_func, return_type)
else:
raise ValueError("Unknown eval type: {}".format(eval_type))
def main(infile, outfile):
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
return
spark_files_dir = load_pickle(read_with_length(infile))
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
sys.path.append(spark_files_dir)
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
value = read_with_length(infile)
_broadcastRegistry[bid] = Broadcast(bid, load_pickle(value))
func = load_obj(infile)
bypassSerializer = load_obj(infile)
if bypassSerializer:
dumps = lambda x: x
else:
dumps = dump_pickle
init_time = time.time()
iterator = read_from_pickle_file(infile)
try:
for obj in func(split_index, iterator):
write_with_length(dumps(obj), outfile)
except Exception as e:
write_int(-2, outfile)
write_with_length(traceback.format_exc(), outfile)
sys.exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
# Mark the beginning of the accumulators section of the output
write_int(-1, outfile)
for aid, accum in _accumulatorRegistry.items():
write_with_length(dump_pickle((aid, accum._value)), outfile)
write_int(-1, outfile)
def main(infile, outfile):
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
return
spark_files_dir = load_pickle(read_with_length(infile))
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
sys.path.append(spark_files_dir)
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
value = read_with_length(infile)
_broadcastRegistry[bid] = Broadcast(bid, load_pickle(value))
func = load_obj(infile)
bypassSerializer = load_obj(infile)
if bypassSerializer:
dumps = lambda x: x
else:
dumps = dump_pickle
init_time = time.time()
iterator = read_from_pickle_file(infile)
try:
for obj in func(split_index, iterator):
write_with_length(dumps(obj), outfile)
except Exception as e:
write_int(-2, outfile)
write_with_length(traceback.format_exc(), outfile)
sys.exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
# Mark the beginning of the accumulators section of the output
write_int(-1, outfile)
for aid, accum in _accumulatorRegistry.items():
write_with_length(dump_pickle((aid, accum._value)), outfile)
write_int(-1, outfile)
def read_udfs(pickleSer, infile, eval_type):
num_udfs = read_int(infile)
udfs = {}
call_udf = []
mapper_str = ""
if eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
# Create function like this:
# lambda a: f([a[0]], [a[0], a[1]])
# We assume there is only one UDF here because grouped map doesn't
# support combining multiple UDFs.
assert num_udfs == 1
# See FlatMapGroupsInPandasExec for how arg_offsets are used to
# distinguish between grouping attributes and data attributes
arg_offsets, udf = read_single_udf(pickleSer, infile, eval_type)
udfs['f'] = udf
split_offset = arg_offsets[0] + 1
arg0 = ["a[%d]" % o for o in arg_offsets[1:split_offset]]
arg1 = ["a[%d]" % o for o in arg_offsets[split_offset:]]
mapper_str = "lambda a: f([%s], [%s])" % (", ".join(arg0),
", ".join(arg1))
else:
# Create function like this:
# lambda a: (f0(a[0]), f1(a[1], a[2]), f2(a[3]))
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(pickleSer, infile, eval_type)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
if eval_type in (PythonEvalType.SQL_SCALAR_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF,
PythonEvalType.SQL_WINDOW_AGG_PANDAS_UDF):
timezone = utf8_deserializer.loads(infile)
ser = ArrowStreamPandasSerializer(timezone)
else:
ser = BatchedSerializer(PickleSerializer(), 100)
# profiling is not supported for UDF
return func, None, ser, ser
def read_udfs(pickleSer, infile):
num_udfs = read_int(infile)
udfs = {}
call_udf = []
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(pickleSer, infile)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
# Create function like this:
# lambda a: (f0(a0), f1(a1, a2), f2(a3))
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
ser = BatchedSerializer(PickleSerializer(), 100)
# profiling is not supported for UDF
return func, None, ser, ser
def read_udfs(pickleSer, infile):
num_udfs = read_int(infile)
udfs = {}
call_udf = []
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(pickleSer, infile)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
# Create function like this:
# lambda a: (f0(a0), f1(a1, a2), f2(a3))
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
ser = BatchedSerializer(PickleSerializer(), 100)
# profiling is not supported for UDF
return func, None, ser, ser
def do_termination_test(self, terminator):
from subprocess import Popen, PIPE
from errno import ECONNREFUSED
# start daemon
daemon_path = os.path.join(os.path.dirname(__file__), "daemon.py")
daemon = Popen([sys.executable, daemon_path], stdin=PIPE, stdout=PIPE)
# read the port number
port = read_int(daemon.stdout)
# daemon should accept connections
self.assertTrue(self.connect(port))
# request shutdown
terminator(daemon)
time.sleep(1)
# daemon should no longer accept connections
with self.assertRaises(EnvironmentError) as trap:
self.connect(port)
self.assertEqual(trap.exception.errno, ECONNREFUSED)
def load_stream(self, stream):
"""
Deserialize Cogrouped ArrowRecordBatches to a tuple of Arrow tables and yield as two
lists of pandas.Series.
"""
import pyarrow as pa
dataframes_in_group = None
while dataframes_in_group is None or dataframes_in_group > 0:
dataframes_in_group = read_int(stream)
if dataframes_in_group == 2:
batch1 = [batch for batch in ArrowStreamSerializer.load_stream(self, stream)]
batch2 = [batch for batch in ArrowStreamSerializer.load_stream(self, stream)]
yield (
[self.arrow_to_pandas(c) for c in pa.Table.from_batches(batch1).itercolumns()],
[self.arrow_to_pandas(c) for c in pa.Table.from_batches(batch2).itercolumns()]
)
elif dataframes_in_group != 0:
raise ValueError(
'Invalid number of pandas.DataFrames in group {0}'.format(dataframes_in_group))
def _load_from_socket(
port: Optional[Union[str, int]],
auth_secret: str,
function: int,
all_gather_message: Optional[str] = None,
) -> List[str]:
"""
Load data from a given socket, this is a blocking method thus only return when the socket
connection has been closed.
"""
(sockfile, sock) = local_connect_and_auth(port, auth_secret)
# The call may block forever, so no timeout
sock.settimeout(None)
if function == BARRIER_FUNCTION:
# Make a barrier() function call.
write_int(function, sockfile)
elif function == ALL_GATHER_FUNCTION:
# Make a all_gather() function call.
write_int(function, sockfile)
write_with_length(
cast(str, all_gather_message).encode("utf-8"), sockfile)
else:
raise ValueError("Unrecognized function type")
sockfile.flush()
# Collect result.
len = read_int(sockfile)
res = []
for i in range(len):
res.append(UTF8Deserializer().loads(sockfile))
# Release resources.
sockfile.close()
sock.close()
return res
def read_udfs(pickleSer, infile):
num_udfs = read_int(infile)
if num_udfs == 1:
# fast path for single UDF
_, udf = read_single_udf(pickleSer, infile)
mapper = lambda a: udf(*a)
else:
udfs = {}
call_udf = []
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(pickleSer, infile)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
# Create function like this:
# lambda a: (f0(a0), f1(a1, a2), f2(a3))
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
ser = BatchedSerializer(PickleSerializer(), 100)
# profiling is not supported for UDF
return func, None, ser, ser
def read_udfs(pickleSer, infile):
num_udfs = read_int(infile)
if num_udfs == 1:
# fast path for single UDF
_, udf = read_single_udf(pickleSer, infile)
mapper = lambda a: udf(*a)
else:
udfs = {}
call_udf = []
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(pickleSer, infile)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
# Create function like this:
# lambda a: (f0(a0), f1(a1, a2), f2(a3))
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
ser = BatchedSerializer(PickleSerializer(), 100)
# profiling is not supported for UDF
return func, None, ser, ser
def launch_gateway(conf=None, popen_kwargs=None):
"""
launch jvm gateway
Parameters
----------
conf : :py:class:`pyspark.SparkConf`
spark configuration passed to spark-submit
popen_kwargs : dict
Dictionary of kwargs to pass to Popen when spawning
the py4j JVM. This is a developer feature intended for use in
customizing how pyspark interacts with the py4j JVM (e.g., capturing
stdout/stderr).
Returns
-------
ClientServer or JavaGateway
"""
if "PYSPARK_GATEWAY_PORT" in os.environ:
gateway_port = int(os.environ["PYSPARK_GATEWAY_PORT"])
gateway_secret = os.environ["PYSPARK_GATEWAY_SECRET"]
# Process already exists
proc = None
else:
SPARK_HOME = _find_spark_home()
# Launch the Py4j gateway using Spark's run command so that we pick up the
# proper classpath and settings from spark-env.sh
on_windows = platform.system() == "Windows"
script = "./bin/spark-submit.cmd" if on_windows else "./bin/spark-submit"
command = [os.path.join(SPARK_HOME, script)]
if conf:
for k, v in conf.getAll():
command += ["--conf", "%s=%s" % (k, v)]
submit_args = os.environ.get("PYSPARK_SUBMIT_ARGS", "pyspark-shell")
if os.environ.get("SPARK_TESTING"):
submit_args = " ".join(
["--conf spark.ui.enabled=false", submit_args])
command = command + shlex.split(submit_args)
# Create a temporary directory where the gateway server should write the connection
# information.
conn_info_dir = tempfile.mkdtemp()
try:
fd, conn_info_file = tempfile.mkstemp(dir=conn_info_dir)
os.close(fd)
os.unlink(conn_info_file)
env = dict(os.environ)
env["_PYSPARK_DRIVER_CONN_INFO_PATH"] = conn_info_file
# Launch the Java gateway.
popen_kwargs = {} if popen_kwargs is None else popen_kwargs
# We open a pipe to stdin so that the Java gateway can die when the pipe is broken
popen_kwargs["stdin"] = PIPE
# We always set the necessary environment variables.
popen_kwargs["env"] = env
if not on_windows:
# Don't send ctrl-c / SIGINT to the Java gateway:
def preexec_func():
signal.signal(signal.SIGINT, signal.SIG_IGN)
popen_kwargs["preexec_fn"] = preexec_func
proc = Popen(command, **popen_kwargs)
else:
# preexec_fn not supported on Windows
proc = Popen(command, **popen_kwargs)
# Wait for the file to appear, or for the process to exit, whichever happens first.
while not proc.poll() and not os.path.isfile(conn_info_file):
time.sleep(0.1)
if not os.path.isfile(conn_info_file):
raise RuntimeError(
"Java gateway process exited before sending its port number"
)
with open(conn_info_file, "rb") as info:
gateway_port = read_int(info)
gateway_secret = UTF8Deserializer().loads(info)
finally:
shutil.rmtree(conn_info_dir)
# In Windows, ensure the Java child processes do not linger after Python has exited.
# In UNIX-based systems, the child process can kill itself on broken pipe (i.e. when
# the parent process' stdin sends an EOF). In Windows, however, this is not possible
# because java.lang.Process reads directly from the parent process' stdin, contending
# with any opportunity to read an EOF from the parent. Note that this is only best
# effort and will not take effect if the python process is violently terminated.
if on_windows:
# In Windows, the child process here is "spark-submit.cmd", not the JVM itself
# (because the UNIX "exec" command is not available). This means we cannot simply
# call proc.kill(), which kills only the "spark-submit.cmd" process but not the
# JVMs. Instead, we use "taskkill" with the tree-kill option "/t" to terminate all
# child processes in the tree (http://technet.microsoft.com/en-us/library/bb491009.aspx)
def killChild():
Popen([
"cmd", "/c", "taskkill", "/f", "/t", "/pid",
str(proc.pid)
])
atexit.register(killChild)
# Connect to the gateway (or client server to pin the thread between JVM and Python)
if os.environ.get("PYSPARK_PIN_THREAD", "true").lower() == "true":
gateway = ClientServer(
java_parameters=JavaParameters(port=gateway_port,
auth_token=gateway_secret,
auto_convert=True),
python_parameters=PythonParameters(port=0, eager_load=False),
)
else:
gateway = JavaGateway(gateway_parameters=GatewayParameters(
port=gateway_port, auth_token=gateway_secret, auto_convert=True))
# Store a reference to the Popen object for use by the caller (e.g., in reading stdout/stderr)
gateway.proc = proc
# Import the classes used by PySpark
java_import(gateway.jvm, "org.apache.spark.SparkConf")
java_import(gateway.jvm, "org.apache.spark.api.java.*")
java_import(gateway.jvm, "org.apache.spark.api.python.*")
java_import(gateway.jvm, "org.apache.spark.ml.python.*")
java_import(gateway.jvm, "org.apache.spark.mllib.api.python.*")
java_import(gateway.jvm, "org.apache.spark.resource.*")
# TODO(davies): move into sql
java_import(gateway.jvm, "org.apache.spark.sql.*")
java_import(gateway.jvm, "org.apache.spark.sql.api.python.*")
java_import(gateway.jvm, "org.apache.spark.sql.hive.*")
java_import(gateway.jvm, "scala.Tuple2")
return gateway
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
sys.exit(-1)
version = utf8_deserializer.loads(infile)
if version != "%d.%d" % sys.version_info[:2]:
raise Exception(
("Python in worker has different version %s than that in " +
"driver %s, PySpark cannot run with different minor versions."
+ "Please check environment variables PYSPARK_PYTHON and " +
"PYSPARK_DRIVER_PYTHON are correctly set.") %
("%d.%d" % sys.version_info[:2], version))
# initialize global state
taskContext = TaskContext._getOrCreate()
taskContext._stageId = read_int(infile)
taskContext._partitionId = read_int(infile)
taskContext._attemptNumber = read_int(infile)
taskContext._taskAttemptId = read_long(infile)
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(
spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
if sys.version > '3':
import importlib
importlib.invalidate_caches()
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
path = utf8_deserializer.loads(infile)
_broadcastRegistry[bid] = Broadcast(path=path)
else:
bid = -bid - 1
_broadcastRegistry.pop(bid)
_accumulatorRegistry.clear()
eval_type = read_int(infile)
if eval_type == PythonEvalType.NON_UDF:
func, profiler, deserializer, serializer = read_command(
pickleSer, infile)
else:
func, profiler, deserializer, serializer = read_udfs(
pickleSer, infile, eval_type)
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
if profiler:
profiler.profile(process)
else:
process()
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc().encode("utf-8"), outfile)
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print("PySpark worker failed with exception:", file=sys.stderr)
print(traceback.format_exc(), file=sys.stderr)
sys.exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
sys.exit(-1)
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
sys.exit(-1)
version = utf8_deserializer.loads(infile)
if version != "%d.%d" % sys.version_info[:2]:
raise Exception(("Python in worker has different version %s than that in " +
"driver %s, PySpark cannot run with different minor versions." +
"Please check environment variables PYSPARK_PYTHON and " +
"PYSPARK_DRIVER_PYTHON are correctly set.") %
("%d.%d" % sys.version_info[:2], version))
# read inputs only for a barrier task
isBarrier = read_bool(infile)
boundPort = read_int(infile)
secret = UTF8Deserializer().loads(infile)
# set up memory limits
memory_limit_mb = int(os.environ.get('PYSPARK_EXECUTOR_MEMORY_MB', "-1"))
if memory_limit_mb > 0 and has_resource_module:
total_memory = resource.RLIMIT_AS
try:
(soft_limit, hard_limit) = resource.getrlimit(total_memory)
msg = "Current mem limits: {0} of max {1}\n".format(soft_limit, hard_limit)
print(msg, file=sys.stderr)
# convert to bytes
new_limit = memory_limit_mb * 1024 * 1024
if soft_limit == resource.RLIM_INFINITY or new_limit < soft_limit:
msg = "Setting mem limits to {0} of max {1}\n".format(new_limit, new_limit)
print(msg, file=sys.stderr)
resource.setrlimit(total_memory, (new_limit, new_limit))
except (resource.error, OSError, ValueError) as e:
# not all systems support resource limits, so warn instead of failing
print("WARN: Failed to set memory limit: {0}\n".format(e), file=sys.stderr)
# initialize global state
taskContext = None
if isBarrier:
taskContext = BarrierTaskContext._getOrCreate()
BarrierTaskContext._initialize(boundPort, secret)
else:
taskContext = TaskContext._getOrCreate()
# read inputs for TaskContext info
taskContext._stageId = read_int(infile)
taskContext._partitionId = read_int(infile)
taskContext._attemptNumber = read_int(infile)
taskContext._taskAttemptId = read_long(infile)
taskContext._localProperties = dict()
for i in range(read_int(infile)):
k = utf8_deserializer.loads(infile)
v = utf8_deserializer.loads(infile)
taskContext._localProperties[k] = v
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
if sys.version > '3':
import importlib
importlib.invalidate_caches()
# fetch names and values of broadcast variables
needs_broadcast_decryption_server = read_bool(infile)
num_broadcast_variables = read_int(infile)
if needs_broadcast_decryption_server:
# read the decrypted data from a server in the jvm
port = read_int(infile)
auth_secret = utf8_deserializer.loads(infile)
(broadcast_sock_file, _) = local_connect_and_auth(port, auth_secret)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
if needs_broadcast_decryption_server:
read_bid = read_long(broadcast_sock_file)
assert(read_bid == bid)
_broadcastRegistry[bid] = \
Broadcast(sock_file=broadcast_sock_file)
else:
path = utf8_deserializer.loads(infile)
_broadcastRegistry[bid] = Broadcast(path=path)
else:
bid = - bid - 1
_broadcastRegistry.pop(bid)
if needs_broadcast_decryption_server:
broadcast_sock_file.write(b'1')
broadcast_sock_file.close()
_accumulatorRegistry.clear()
eval_type = read_int(infile)
if eval_type == PythonEvalType.NON_UDF:
func, profiler, deserializer, serializer = read_command(pickleSer, infile)
else:
func, profiler, deserializer, serializer = read_udfs(pickleSer, infile, eval_type)
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
if profiler:
profiler.profile(process)
else:
process()
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc().encode("utf-8"), outfile)
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print("PySpark worker failed with exception:", file=sys.stderr)
print(traceback.format_exc(), file=sys.stderr)
sys.exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
sys.exit(-1)
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
return
# initialize global state
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
sys.path.append(
spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
sys.path.append(os.path.join(spark_files_dir, filename))
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
ser = CompressedSerializer(pickleSer)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
value = ser._read_with_length(infile)
_broadcastRegistry[bid] = Broadcast(bid, value)
else:
bid = -bid - 1
_broadcastRegistry.pop(bid)
_accumulatorRegistry.clear()
command = pickleSer._read_with_length(infile)
if isinstance(command, Broadcast):
command = pickleSer.loads(command.value)
(func, deserializer, serializer) = command
init_time = time.time()
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc(), outfile)
outfile.flush()
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print >> sys.stderr, "PySpark worker failed with exception:"
print >> sys.stderr, traceback.format_exc()
exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
exit(-1)
# initialize global state
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(
spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
bser = LargeObjectSerializer()
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
size = read_long(infile)
s = SizeLimitedStream(infile, size)
value = list(
(bser.load_stream(s)))[0] # read out all the bytes
_broadcastRegistry[bid] = Broadcast(bid, value)
else:
bid = -bid - 1
_broadcastRegistry.pop(bid)
_accumulatorRegistry.clear()
command = pickleSer._read_with_length(infile)
if isinstance(command, Broadcast):
command = pickleSer.loads(command.value)
(func, stats, deserializer, serializer) = command
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
if stats:
p = cProfile.Profile()
p.runcall(process)
st = pstats.Stats(p)
st.stream = None # make it picklable
stats.add(st.strip_dirs())
else:
process()
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc(), outfile)
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print >> sys.stderr, "PySpark worker failed with exception:"
print >> sys.stderr, traceback.format_exc()
exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
exit(-1)
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
exit(-1)
# initialize global state
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
path = utf8_deserializer.loads(infile)
_broadcastRegistry[bid] = Broadcast(path=path)
else:
bid = - bid - 1
_broadcastRegistry.pop(bid)
_accumulatorRegistry.clear()
command = pickleSer._read_with_length(infile)
if isinstance(command, Broadcast):
command = pickleSer.loads(command.value)
(func, profiler, deserializer, serializer), version = command
if version != sys.version_info[:2]:
raise Exception(("Python in worker has different version %s than that in " +
"driver %s, PySpark cannot run with different minor versions") %
(sys.version_info[:2], version))
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
if profiler:
profiler.profile(process)
else:
process()
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc(), outfile)
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print >> sys.stderr, "PySpark worker failed with exception:"
print >> sys.stderr, traceback.format_exc()
exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
exit(-1)
def manager():
# Create a new process group to corral our children
os.setpgid(0, 0)
# Create a listening socket on the AF_INET loopback interface
listen_sock = socket.socket(AF_INET, SOCK_STREAM)
listen_sock.bind(('127.0.0.1', 0))
listen_sock.listen(max(1024, SOMAXCONN))
listen_host, listen_port = listen_sock.getsockname()
write_int(listen_port, sys.stdout)
sys.stdout.flush()
def shutdown(code):
signal.signal(SIGTERM, SIG_DFL)
# Send SIGHUP to notify workers of shutdown
os.kill(0, SIGHUP)
exit(code)
def handle_sigterm(*args):
shutdown(1)
signal.signal(SIGTERM, handle_sigterm) # Gracefully exit on SIGTERM
signal.signal(SIGHUP, SIG_IGN) # Don't die on SIGHUP
reuse = os.environ.get("SPARK_REUSE_WORKER")
# Initialization complete
try:
while True:
try:
ready_fds = select.select([0, listen_sock], [], [], 1)[0]
except select.error as ex:
if ex[0] == EINTR:
continue
else:
raise
# cleanup in signal handler will cause deadlock
cleanup_dead_children()
if 0 in ready_fds:
try:
worker_pid = read_int(sys.stdin)
except EOFError:
# Spark told us to exit by closing stdin
shutdown(0)
try:
os.kill(worker_pid, signal.SIGKILL)
except OSError:
pass # process already died
if listen_sock in ready_fds:
try:
sock, _ = listen_sock.accept()
except OSError as e:
if e.errno == EINTR:
continue
raise
# Launch a worker process
try:
pid = os.fork()
except OSError as e:
if e.errno in (EAGAIN, EINTR):
time.sleep(1)
pid = os.fork() # error here will shutdown daemon
else:
outfile = sock.makefile('w')
write_int(e.errno, outfile) # Signal that the fork failed
outfile.flush()
outfile.close()
sock.close()
continue
if pid == 0:
# in child process
listen_sock.close()
try:
# Acknowledge that the fork was successful
outfile = sock.makefile("w")
write_int(os.getpid(), outfile)
outfile.flush()
outfile.close()
while True:
code = worker(sock)
if not reuse or code:
# wait for closing
try:
while sock.recv(1024):
pass
except Exception:
pass
break
gc.collect()
except:
traceback.print_exc()
os._exit(1)
else:
os._exit(0)
else:
sock.close()
finally:
shutdown(1)
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
sys.exit(-1)
version = utf8_deserializer.loads(infile)
if version != "%d.%d" % sys.version_info[:2]:
raise Exception(("Python in worker has different version %s than that in " +
"driver %s, PySpark cannot run with different minor versions." +
"Please check environment variables PYSPARK_PYTHON and " +
"PYSPARK_DRIVER_PYTHON are correctly set.") %
("%d.%d" % sys.version_info[:2], version))
# read inputs only for a barrier task
isBarrier = read_bool(infile)
boundPort = read_int(infile)
secret = UTF8Deserializer().loads(infile)
# initialize global state
taskContext = None
if isBarrier:
taskContext = BarrierTaskContext._getOrCreate()
BarrierTaskContext._initialize(boundPort, secret)
else:
taskContext = TaskContext._getOrCreate()
# read inputs for TaskContext info
taskContext._stageId = read_int(infile)
taskContext._partitionId = read_int(infile)
taskContext._attemptNumber = read_int(infile)
taskContext._taskAttemptId = read_long(infile)
taskContext._localProperties = dict()
for i in range(read_int(infile)):
k = utf8_deserializer.loads(infile)
v = utf8_deserializer.loads(infile)
taskContext._localProperties[k] = v
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
if sys.version > '3':
import importlib
importlib.invalidate_caches()
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
path = utf8_deserializer.loads(infile)
_broadcastRegistry[bid] = Broadcast(path=path)
else:
bid = - bid - 1
_broadcastRegistry.pop(bid)
_accumulatorRegistry.clear()
eval_type = read_int(infile)
if eval_type == PythonEvalType.NON_UDF:
func, profiler, deserializer, serializer = read_command(pickleSer, infile)
else:
func, profiler, deserializer, serializer = read_udfs(pickleSer, infile, eval_type)
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
if profiler:
profiler.profile(process)
else:
process()
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc().encode("utf-8"), outfile)
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print("PySpark worker failed with exception:", file=sys.stderr)
print(traceback.format_exc(), file=sys.stderr)
sys.exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
sys.exit(-1)
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
exit(-1)
# initialize global state
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
if sys.version > '3':
import importlib
importlib.invalidate_caches()
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
path = utf8_deserializer.loads(infile)
_broadcastRegistry[bid] = Broadcast(path=path)
else:
bid = - bid - 1
_broadcastRegistry.pop(bid)
_accumulatorRegistry.clear()
command = pickleSer._read_with_length(infile)
if isinstance(command, Broadcast):
command = pickleSer.loads(command.value)
(func, profiler, deserializer, serializer), version = command
if version != sys.version_info[:2]:
raise Exception(("Python in worker has different version %s than that in " +
"driver %s, PySpark cannot run with different minor versions") %
(sys.version_info[:2], version))
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
if profiler:
profiler.profile(process)
else:
process()
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc().encode("utf-8"), outfile)
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print("PySpark worker failed with exception:", file=sys.stderr)
print(traceback.format_exc(), file=sys.stderr)
exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
exit(-1)
def launch_gateway(conf=None):
"""
launch jvm gateway
:param conf: spark configuration passed to spark-submit
:return:
"""
if "PYSPARK_GATEWAY_PORT" in os.environ:
gateway_port = int(os.environ["PYSPARK_GATEWAY_PORT"])
gateway_secret = os.environ["PYSPARK_GATEWAY_SECRET"]
else:
SPARK_HOME = _find_spark_home()
# Launch the Py4j gateway using Spark's run command so that we pick up the
# proper classpath and settings from spark-env.sh
on_windows = platform.system() == "Windows"
script = "./bin/spark-submit.cmd" if on_windows else "./bin/spark-submit"
command = [os.path.join(SPARK_HOME, script)]
if conf:
for k, v in conf.getAll():
command += ['--conf', '%s=%s' % (k, v)]
submit_args = os.environ.get("PYSPARK_SUBMIT_ARGS", "pyspark-shell")
if os.environ.get("SPARK_TESTING"):
submit_args = ' '.join([
"--conf spark.ui.enabled=false",
submit_args
])
command = command + shlex.split(submit_args)
# Create a temporary directory where the gateway server should write the connection
# information.
conn_info_dir = tempfile.mkdtemp()
try:
fd, conn_info_file = tempfile.mkstemp(dir=conn_info_dir)
os.close(fd)
os.unlink(conn_info_file)
env = dict(os.environ)
env["_PYSPARK_DRIVER_CONN_INFO_PATH"] = conn_info_file
# Launch the Java gateway.
# We open a pipe to stdin so that the Java gateway can die when the pipe is broken
if not on_windows:
# Don't send ctrl-c / SIGINT to the Java gateway:
def preexec_func():
signal.signal(signal.SIGINT, signal.SIG_IGN)
proc = Popen(command, stdin=PIPE, preexec_fn=preexec_func, env=env)
else:
# preexec_fn not supported on Windows
proc = Popen(command, stdin=PIPE, env=env)
# Wait for the file to appear, or for the process to exit, whichever happens first.
while not proc.poll() and not os.path.isfile(conn_info_file):
time.sleep(0.1)
if not os.path.isfile(conn_info_file):
raise Exception("Java gateway process exited before sending its port number")
with open(conn_info_file, "rb") as info:
gateway_port = read_int(info)
gateway_secret = UTF8Deserializer().loads(info)
finally:
shutil.rmtree(conn_info_dir)
# In Windows, ensure the Java child processes do not linger after Python has exited.
# In UNIX-based systems, the child process can kill itself on broken pipe (i.e. when
# the parent process' stdin sends an EOF). In Windows, however, this is not possible
# because java.lang.Process reads directly from the parent process' stdin, contending
# with any opportunity to read an EOF from the parent. Note that this is only best
# effort and will not take effect if the python process is violently terminated.
if on_windows:
# In Windows, the child process here is "spark-submit.cmd", not the JVM itself
# (because the UNIX "exec" command is not available). This means we cannot simply
# call proc.kill(), which kills only the "spark-submit.cmd" process but not the
# JVMs. Instead, we use "taskkill" with the tree-kill option "/t" to terminate all
# child processes in the tree (http://technet.microsoft.com/en-us/library/bb491009.aspx)
def killChild():
Popen(["cmd", "/c", "taskkill", "/f", "/t", "/pid", str(proc.pid)])
atexit.register(killChild)
# Connect to the gateway
gateway = JavaGateway(
gateway_parameters=GatewayParameters(port=gateway_port, auth_token=gateway_secret,
auto_convert=True))
# Import the classes used by PySpark
java_import(gateway.jvm, "org.apache.spark.SparkConf")
java_import(gateway.jvm, "org.apache.spark.api.java.*")
java_import(gateway.jvm, "org.apache.spark.api.python.*")
java_import(gateway.jvm, "org.apache.spark.ml.python.*")
java_import(gateway.jvm, "org.apache.spark.mllib.api.python.*")
# TODO(davies): move into sql
java_import(gateway.jvm, "org.apache.spark.sql.*")
java_import(gateway.jvm, "org.apache.spark.sql.api.python.*")
java_import(gateway.jvm, "org.apache.spark.sql.hive.*")
java_import(gateway.jvm, "scala.Tuple2")
return gateway
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
exit(-1)
# initialize global state
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
bser = LargeObjectSerializer()
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
size = read_long(infile)
s = SizeLimitedStream(infile, size)
value = list((bser.load_stream(s)))[0] # read out all the bytes
_broadcastRegistry[bid] = Broadcast(bid, value)
else:
bid = - bid - 1
_broadcastRegistry.pop(bid)
_accumulatorRegistry.clear()
command = pickleSer._read_with_length(infile)
if isinstance(command, Broadcast):
command = pickleSer.loads(command.value)
(func, stats, deserializer, serializer) = command
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
if stats:
p = cProfile.Profile()
p.runcall(process)
st = pstats.Stats(p)
st.stream = None # make it picklable
stats.add(st.strip_dirs())
else:
process()
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc(), outfile)
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print >> sys.stderr, "PySpark worker failed with exception:"
print >> sys.stderr, traceback.format_exc()
exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
exit(-1)
def loads(self, obj):
stream = BytesIO(obj)
key_length = read_int(stream)
key = stream.read(key_length).decode('utf-8')
return (key, _read_vec(stream))
def launch_gateway(conf=None):
"""
launch jvm gateway
:param conf: spark configuration passed to spark-submit
:return:
"""
if "PYSPARK_GATEWAY_PORT" in os.environ:
gateway_port = int(os.environ["PYSPARK_GATEWAY_PORT"])
gateway_secret = os.environ["PYSPARK_GATEWAY_SECRET"]
else:
SPARK_HOME = _find_spark_home()
# Launch the Py4j gateway using Spark's run command so that we pick up the
# proper classpath and settings from spark-env.sh
on_windows = platform.system() == "Windows"
script = "./bin/spark-submit.cmd" if on_windows else "./bin/spark-submit"
command = [os.path.join(SPARK_HOME, script)]
if conf:
for k, v in conf.getAll():
command += ['--conf', '%s=%s' % (k, v)]
submit_args = os.environ.get("PYSPARK_SUBMIT_ARGS", "pyspark-shell")
if os.environ.get("SPARK_TESTING"):
submit_args = ' '.join([
"--conf spark.ui.enabled=false",
submit_args
])
command = command + shlex.split(submit_args)
# Create a temporary directory where the gateway server should write the connection
# information.
conn_info_dir = tempfile.mkdtemp()
try:
fd, conn_info_file = tempfile.mkstemp(dir=conn_info_dir)
os.close(fd)
os.unlink(conn_info_file)
env = dict(os.environ)
env["_PYSPARK_DRIVER_CONN_INFO_PATH"] = conn_info_file
# Launch the Java gateway.
# We open a pipe to stdin so that the Java gateway can die when the pipe is broken
if not on_windows:
# Don't send ctrl-c / SIGINT to the Java gateway:
def preexec_func():
signal.signal(signal.SIGINT, signal.SIG_IGN)
proc = Popen(command, stdin=PIPE, preexec_fn=preexec_func, env=env)
else:
# preexec_fn not supported on Windows
proc = Popen(command, stdin=PIPE, env=env)
# Wait for the file to appear, or for the process to exit, whichever happens first.
while not proc.poll() and not os.path.isfile(conn_info_file):
time.sleep(0.1)
if not os.path.isfile(conn_info_file):
raise Exception("Java gateway process exited before sending its port number")
with open(conn_info_file, "rb") as info:
gateway_port = read_int(info)
gateway_secret = UTF8Deserializer().loads(info)
finally:
shutil.rmtree(conn_info_dir)
# In Windows, ensure the Java child processes do not linger after Python has exited.
# In UNIX-based systems, the child process can kill itself on broken pipe (i.e. when
# the parent process' stdin sends an EOF). In Windows, however, this is not possible
# because java.lang.Process reads directly from the parent process' stdin, contending
# with any opportunity to read an EOF from the parent. Note that this is only best
# effort and will not take effect if the python process is violently terminated.
if on_windows:
# In Windows, the child process here is "spark-submit.cmd", not the JVM itself
# (because the UNIX "exec" command is not available). This means we cannot simply
# call proc.kill(), which kills only the "spark-submit.cmd" process but not the
# JVMs. Instead, we use "taskkill" with the tree-kill option "/t" to terminate all
# child processes in the tree (http://technet.microsoft.com/en-us/library/bb491009.aspx)
def killChild():
Popen(["cmd", "/c", "taskkill", "/f", "/t", "/pid", str(proc.pid)])
atexit.register(killChild)
# Connect to the gateway
gateway = JavaGateway(
gateway_parameters=GatewayParameters(port=gateway_port, auth_token=gateway_secret,
auto_convert=True))
# Import the classes used by PySpark
java_import(gateway.jvm, "org.apache.spark.SparkConf")
java_import(gateway.jvm, "org.apache.spark.api.java.*")
java_import(gateway.jvm, "org.apache.spark.api.python.*")
java_import(gateway.jvm, "org.apache.spark.ml.python.*")
java_import(gateway.jvm, "org.apache.spark.mllib.api.python.*")
# TODO(davies): move into sql
java_import(gateway.jvm, "org.apache.spark.sql.*")
java_import(gateway.jvm, "org.apache.spark.sql.api.python.*")
java_import(gateway.jvm, "org.apache.spark.sql.hive.*")
java_import(gateway.jvm, "scala.Tuple2")
return gateway
def read_udfs(pickleSer, infile, eval_type):
runner_conf = {}
if eval_type in (PythonEvalType.SQL_SCALAR_PANDAS_UDF,
PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF,
PythonEvalType.SQL_MAP_PANDAS_ITER_UDF,
PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF,
PythonEvalType.SQL_WINDOW_AGG_PANDAS_UDF):
# Load conf used for pandas_udf evaluation
num_conf = read_int(infile)
for i in range(num_conf):
k = utf8_deserializer.loads(infile)
v = utf8_deserializer.loads(infile)
runner_conf[k] = v
# NOTE: if timezone is set here, that implies respectSessionTimeZone is True
timezone = runner_conf.get("spark.sql.session.timeZone", None)
safecheck = runner_conf.get(
"spark.sql.execution.pandas.arrowSafeTypeConversion",
"false").lower() == 'true'
# Used by SQL_GROUPED_MAP_PANDAS_UDF and SQL_SCALAR_PANDAS_UDF when returning StructType
assign_cols_by_name = runner_conf.get(
"spark.sql.legacy.execution.pandas.groupedMap.assignColumnsByName", "true")\
.lower() == "true"
# Scalar Pandas UDF handles struct type arguments as pandas DataFrames instead of
# pandas Series. See SPARK-27240.
df_for_struct = (
eval_type == PythonEvalType.SQL_SCALAR_PANDAS_UDF
or eval_type == PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF
or eval_type == PythonEvalType.SQL_MAP_PANDAS_ITER_UDF)
ser = ArrowStreamPandasUDFSerializer(timezone, safecheck,
assign_cols_by_name,
df_for_struct)
else:
ser = BatchedSerializer(PickleSerializer(), 100)
num_udfs = read_int(infile)
is_scalar_iter = eval_type == PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF
is_map_iter = eval_type == PythonEvalType.SQL_MAP_PANDAS_ITER_UDF
if is_scalar_iter or is_map_iter:
if is_scalar_iter:
assert num_udfs == 1, "One SCALAR_ITER UDF expected here."
if is_map_iter:
assert num_udfs == 1, "One MAP_ITER UDF expected here."
arg_offsets, udf = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=0)
def func(_, iterator):
num_input_rows = [0]
def map_batch(batch):
udf_args = [batch[offset] for offset in arg_offsets]
num_input_rows[0] += len(udf_args[0])
if len(udf_args) == 1:
return udf_args[0]
else:
return tuple(udf_args)
iterator = map(map_batch, iterator)
result_iter = udf(iterator)
num_output_rows = 0
for result_batch, result_type in result_iter:
num_output_rows += len(result_batch)
assert is_map_iter or num_output_rows <= num_input_rows[0], \
"Pandas MAP_ITER UDF outputted more rows than input rows."
yield (result_batch, result_type)
if is_scalar_iter:
try:
next(iterator)
except StopIteration:
pass
else:
raise RuntimeError(
"SQL_SCALAR_PANDAS_ITER_UDF should exhaust the input "
"iterator.")
if is_scalar_iter and num_output_rows != num_input_rows[0]:
raise RuntimeError(
"The number of output rows of pandas iterator UDF should be "
"the same with input rows. The input rows number is %d but the "
"output rows number is %d." %
(num_input_rows[0], num_output_rows))
# profiling is not supported for UDF
return func, None, ser, ser
udfs = {}
call_udf = []
mapper_str = ""
if eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
# Create function like this:
# lambda a: f([a[0]], [a[0], a[1]])
# We assume there is only one UDF here because grouped map doesn't
# support combining multiple UDFs.
assert num_udfs == 1
# See FlatMapGroupsInPandasExec for how arg_offsets are used to
# distinguish between grouping attributes and data attributes
arg_offsets, udf = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=0)
udfs['f'] = udf
split_offset = arg_offsets[0] + 1
arg0 = ["a[%d]" % o for o in arg_offsets[1:split_offset]]
arg1 = ["a[%d]" % o for o in arg_offsets[split_offset:]]
mapper_str = "lambda a: f([%s], [%s])" % (", ".join(arg0),
", ".join(arg1))
else:
# Create function like this:
# lambda a: (f0(a[0]), f1(a[1], a[2]), f2(a[3]))
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=i)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
# profiling is not supported for UDF
return func, None, ser, ser
def manager():
# Create a new process group to corral our children
os.setpgid(0, 0)
# Create a listening socket on the AF_INET loopback interface
listen_sock = socket.socket(AF_INET, SOCK_STREAM)
listen_sock.bind(('127.0.0.1', 0))
listen_sock.listen(max(1024, SOMAXCONN))
listen_host, listen_port = listen_sock.getsockname()
write_int(listen_port, sys.stdout)
def shutdown(code):
signal.signal(SIGTERM, SIG_DFL)
# Send SIGHUP to notify workers of shutdown
os.kill(0, SIGHUP)
exit(code)
def handle_sigterm(*args):
shutdown(1)
signal.signal(SIGTERM, handle_sigterm) # Gracefully exit on SIGTERM
signal.signal(SIGHUP, SIG_IGN) # Don't die on SIGHUP
# Cleanup zombie children
def handle_sigchld(*args):
try:
pid, status = os.waitpid(0, os.WNOHANG)
if status != 0:
msg = "worker %s crashed abruptly with exit status %s" % (pid, status)
print >> sys.stderr, msg
except EnvironmentError as err:
if err.errno not in (ECHILD, EINTR):
raise
signal.signal(SIGCHLD, handle_sigchld)
# Initialization complete
sys.stdout.close()
try:
while True:
try:
ready_fds = select.select([0, listen_sock], [], [])[0]
except select.error as ex:
if ex[0] == EINTR:
continue
else:
raise
if 0 in ready_fds:
try:
worker_pid = read_int(sys.stdin)
except EOFError:
# Spark told us to exit by closing stdin
shutdown(0)
try:
os.kill(worker_pid, signal.SIGKILL)
except OSError:
pass # process already died
if listen_sock in ready_fds:
sock, addr = listen_sock.accept()
# Launch a worker process
try:
pid = os.fork()
if pid == 0:
listen_sock.close()
try:
worker(sock)
except:
traceback.print_exc()
os._exit(1)
else:
os._exit(0)
else:
sock.close()
except OSError as e:
print >> sys.stderr, "Daemon failed to fork PySpark worker: %s" % e
outfile = os.fdopen(os.dup(sock.fileno()), "a+", 65536)
write_int(-1, outfile) # Signal that the fork failed
outfile.flush()
outfile.close()
sock.close()
finally:
shutdown(1)
def launch_gateway(conf=None):
"""
launch jvm gateway
:param conf: spark configuration passed to spark-submit
:return:
"""
if "PYSPARK_GATEWAY_PORT" in os.environ:
gateway_port = int(os.environ["PYSPARK_GATEWAY_PORT"])
else:
SPARK_HOME = _find_spark_home()
# Launch the Py4j gateway using Spark's run command so that we pick up the
# proper classpath and settings from spark-env.sh
on_windows = platform.system() == "Windows"
script = "./bin/spark-submit.cmd" if on_windows else "./bin/spark-submit"
command = [os.path.join(SPARK_HOME, script)]
if conf:
for k, v in conf.getAll():
command += ['--conf', '%s=%s' % (k, v)]
submit_args = os.environ.get("PYSPARK_SUBMIT_ARGS", "pyspark-shell")
if os.environ.get("SPARK_TESTING"):
submit_args = ' '.join(
["--conf spark.ui.enabled=false", submit_args])
command = command + shlex.split(submit_args)
# Start a socket that will be used by PythonGatewayServer to communicate its port to us
callback_socket = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
callback_socket.bind(('127.0.0.1', 0))
callback_socket.listen(1)
callback_host, callback_port = callback_socket.getsockname()
env = dict(os.environ)
env['_PYSPARK_DRIVER_CALLBACK_HOST'] = callback_host
env['_PYSPARK_DRIVER_CALLBACK_PORT'] = str(callback_port)
# Launch the Java gateway.
# We open a pipe to stdin so that the Java gateway can die when the pipe is broken
if not on_windows:
# Don't send ctrl-c / SIGINT to the Java gateway:
def preexec_func():
signal.signal(signal.SIGINT, signal.SIG_IGN)
proc = Popen(command, stdin=PIPE, preexec_fn=preexec_func, env=env)
else:
# preexec_fn not supported on Windows
proc = Popen(command, stdin=PIPE, env=env)
gateway_port = None
# We use select() here in order to avoid blocking indefinitely if the subprocess dies
# before connecting
while gateway_port is None and proc.poll() is None:
timeout = 1 # (seconds)
readable, _, _ = select.select([callback_socket], [], [], timeout)
if callback_socket in readable:
gateway_connection = callback_socket.accept()[0]
# Determine which ephemeral port the server started on:
gateway_port = read_int(gateway_connection.makefile(mode="rb"))
gateway_connection.close()
callback_socket.close()
if gateway_port is None:
raise Exception(
"Java gateway process exited before sending the driver its port number"
)
# In Windows, ensure the Java child processes do not linger after Python has exited.
# In UNIX-based systems, the child process can kill itself on broken pipe (i.e. when
# the parent process' stdin sends an EOF). In Windows, however, this is not possible
# because java.lang.Process reads directly from the parent process' stdin, contending
# with any opportunity to read an EOF from the parent. Note that this is only best
# effort and will not take effect if the python process is violently terminated.
if on_windows:
# In Windows, the child process here is "spark-submit.cmd", not the JVM itself
# (because the UNIX "exec" command is not available). This means we cannot simply
# call proc.kill(), which kills only the "spark-submit.cmd" process but not the
# JVMs. Instead, we use "taskkill" with the tree-kill option "/t" to terminate all
# child processes in the tree (http://technet.microsoft.com/en-us/library/bb491009.aspx)
def killChild():
Popen([
"cmd", "/c", "taskkill", "/f", "/t", "/pid",
str(proc.pid)
])
atexit.register(killChild)
# Connect to the gateway
gateway = JavaGateway(GatewayClient(port=gateway_port), auto_convert=True)
# Import the classes used by PySpark
java_import(gateway.jvm, "org.apache.spark.SparkConf")
java_import(gateway.jvm, "org.apache.spark.api.java.*")
java_import(gateway.jvm, "org.apache.spark.api.python.*")
java_import(gateway.jvm, "org.apache.spark.ml.python.*")
java_import(gateway.jvm, "org.apache.spark.mllib.api.python.*")
# TODO(davies): move into sql
java_import(gateway.jvm, "org.apache.spark.sql.*")
java_import(gateway.jvm, "org.apache.spark.sql.hive.*")
java_import(gateway.jvm, "scala.Tuple2")
return gateway
def main(infile, outfile):
faulthandler_log_path = os.environ.get("PYTHON_FAULTHANDLER_DIR", None)
try:
if faulthandler_log_path:
faulthandler_log_path = os.path.join(faulthandler_log_path, str(os.getpid()))
faulthandler_log_file = open(faulthandler_log_path, "w")
faulthandler.enable(file=faulthandler_log_file)
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
sys.exit(-1)
version = utf8_deserializer.loads(infile)
if version != "%d.%d" % sys.version_info[:2]:
raise RuntimeError(
(
"Python in worker has different version %s than that in "
+ "driver %s, PySpark cannot run with different minor versions. "
+ "Please check environment variables PYSPARK_PYTHON and "
+ "PYSPARK_DRIVER_PYTHON are correctly set."
)
% ("%d.%d" % sys.version_info[:2], version)
)
# read inputs only for a barrier task
isBarrier = read_bool(infile)
boundPort = read_int(infile)
secret = UTF8Deserializer().loads(infile)
# set up memory limits
memory_limit_mb = int(os.environ.get("PYSPARK_EXECUTOR_MEMORY_MB", "-1"))
if memory_limit_mb > 0 and has_resource_module:
total_memory = resource.RLIMIT_AS
try:
(soft_limit, hard_limit) = resource.getrlimit(total_memory)
msg = "Current mem limits: {0} of max {1}\n".format(soft_limit, hard_limit)
print(msg, file=sys.stderr)
# convert to bytes
new_limit = memory_limit_mb * 1024 * 1024
if soft_limit == resource.RLIM_INFINITY or new_limit < soft_limit:
msg = "Setting mem limits to {0} of max {1}\n".format(new_limit, new_limit)
print(msg, file=sys.stderr)
resource.setrlimit(total_memory, (new_limit, new_limit))
except (resource.error, OSError, ValueError) as e:
# not all systems support resource limits, so warn instead of failing
lineno = (
getframeinfo(currentframe()).lineno + 1 if currentframe() is not None else 0
)
print(
warnings.formatwarning(
"Failed to set memory limit: {0}".format(e),
ResourceWarning,
__file__,
lineno,
),
file=sys.stderr,
)
# initialize global state
taskContext = None
if isBarrier:
taskContext = BarrierTaskContext._getOrCreate()
BarrierTaskContext._initialize(boundPort, secret)
# Set the task context instance here, so we can get it by TaskContext.get for
# both TaskContext and BarrierTaskContext
TaskContext._setTaskContext(taskContext)
else:
taskContext = TaskContext._getOrCreate()
# read inputs for TaskContext info
taskContext._stageId = read_int(infile)
taskContext._partitionId = read_int(infile)
taskContext._attemptNumber = read_int(infile)
taskContext._taskAttemptId = read_long(infile)
taskContext._cpus = read_int(infile)
taskContext._resources = {}
for r in range(read_int(infile)):
key = utf8_deserializer.loads(infile)
name = utf8_deserializer.loads(infile)
addresses = []
taskContext._resources = {}
for a in range(read_int(infile)):
addresses.append(utf8_deserializer.loads(infile))
taskContext._resources[key] = ResourceInformation(name, addresses)
taskContext._localProperties = dict()
for i in range(read_int(infile)):
k = utf8_deserializer.loads(infile)
v = utf8_deserializer.loads(infile)
taskContext._localProperties[k] = v
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
importlib.invalidate_caches()
# fetch names and values of broadcast variables
needs_broadcast_decryption_server = read_bool(infile)
num_broadcast_variables = read_int(infile)
if needs_broadcast_decryption_server:
# read the decrypted data from a server in the jvm
port = read_int(infile)
auth_secret = utf8_deserializer.loads(infile)
(broadcast_sock_file, _) = local_connect_and_auth(port, auth_secret)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
if needs_broadcast_decryption_server:
read_bid = read_long(broadcast_sock_file)
assert read_bid == bid
_broadcastRegistry[bid] = Broadcast(sock_file=broadcast_sock_file)
else:
path = utf8_deserializer.loads(infile)
_broadcastRegistry[bid] = Broadcast(path=path)
else:
bid = -bid - 1
_broadcastRegistry.pop(bid)
if needs_broadcast_decryption_server:
broadcast_sock_file.write(b"1")
broadcast_sock_file.close()
_accumulatorRegistry.clear()
eval_type = read_int(infile)
if eval_type == PythonEvalType.NON_UDF:
func, profiler, deserializer, serializer = read_command(pickleSer, infile)
else:
func, profiler, deserializer, serializer = read_udfs(pickleSer, infile, eval_type)
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
out_iter = func(split_index, iterator)
try:
serializer.dump_stream(out_iter, outfile)
finally:
if hasattr(out_iter, "close"):
out_iter.close()
if profiler:
profiler.profile(process)
else:
process()
# Reset task context to None. This is a guard code to avoid residual context when worker
# reuse.
TaskContext._setTaskContext(None)
BarrierTaskContext._setTaskContext(None)
except BaseException as e:
try:
exc_info = None
if os.environ.get("SPARK_SIMPLIFIED_TRACEBACK", False):
tb = try_simplify_traceback(sys.exc_info()[-1])
if tb is not None:
e.__cause__ = None
exc_info = "".join(traceback.format_exception(type(e), e, tb))
if exc_info is None:
exc_info = traceback.format_exc()
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(exc_info.encode("utf-8"), outfile)
except IOError:
# JVM close the socket
pass
except BaseException:
# Write the error to stderr if it happened while serializing
print("PySpark worker failed with exception:", file=sys.stderr)
print(traceback.format_exc(), file=sys.stderr)
sys.exit(-1)
finally:
if faulthandler_log_path:
faulthandler.disable()
faulthandler_log_file.close()
os.remove(faulthandler_log_path)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
sys.exit(-1)
def read_udfs(pickleSer, infile, eval_type):
runner_conf = {}
if eval_type in (PythonEvalType.SQL_SCALAR_PANDAS_UDF,
PythonEvalType.SQL_COGROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF,
PythonEvalType.SQL_MAP_PANDAS_ITER_UDF,
PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF,
PythonEvalType.SQL_WINDOW_AGG_PANDAS_UDF):
# Load conf used for pandas_udf evaluation
num_conf = read_int(infile)
for i in range(num_conf):
k = utf8_deserializer.loads(infile)
v = utf8_deserializer.loads(infile)
runner_conf[k] = v
# NOTE: if timezone is set here, that implies respectSessionTimeZone is True
timezone = runner_conf.get("spark.sql.session.timeZone", None)
safecheck = runner_conf.get(
"spark.sql.execution.pandas.convertToArrowArraySafely",
"false").lower() == 'true'
# Used by SQL_GROUPED_MAP_PANDAS_UDF and SQL_SCALAR_PANDAS_UDF when returning StructType
assign_cols_by_name = runner_conf.get(
"spark.sql.legacy.execution.pandas.groupedMap.assignColumnsByName", "true")\
.lower() == "true"
if eval_type == PythonEvalType.SQL_COGROUPED_MAP_PANDAS_UDF:
ser = CogroupUDFSerializer(timezone, safecheck,
assign_cols_by_name)
else:
# Scalar Pandas UDF handles struct type arguments as pandas DataFrames instead of
# pandas Series. See SPARK-27240.
df_for_struct = (
eval_type == PythonEvalType.SQL_SCALAR_PANDAS_UDF
or eval_type == PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF
or eval_type == PythonEvalType.SQL_MAP_PANDAS_ITER_UDF)
ser = ArrowStreamPandasUDFSerializer(timezone, safecheck,
assign_cols_by_name,
df_for_struct)
else:
ser = BatchedSerializer(PickleSerializer(), 100)
num_udfs = read_int(infile)
is_scalar_iter = eval_type == PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF
is_map_iter = eval_type == PythonEvalType.SQL_MAP_PANDAS_ITER_UDF
if is_scalar_iter or is_map_iter:
if is_scalar_iter:
assert num_udfs == 1, "One SCALAR_ITER UDF expected here."
if is_map_iter:
assert num_udfs == 1, "One MAP_ITER UDF expected here."
arg_offsets, udf = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=0)
def func(_, iterator):
num_input_rows = 0
def map_batch(batch):
nonlocal num_input_rows
udf_args = [batch[offset] for offset in arg_offsets]
num_input_rows += len(udf_args[0])
if len(udf_args) == 1:
return udf_args[0]
else:
return tuple(udf_args)
iterator = map(map_batch, iterator)
result_iter = udf(iterator)
num_output_rows = 0
for result_batch, result_type in result_iter:
num_output_rows += len(result_batch)
# This assert is for Scalar Iterator UDF to fail fast.
# The length of the entire input can only be explicitly known
# by consuming the input iterator in user side. Therefore,
# it's very unlikely the output length is higher than
# input length.
assert is_map_iter or num_output_rows <= num_input_rows, \
"Pandas SCALAR_ITER UDF outputted more rows than input rows."
yield (result_batch, result_type)
if is_scalar_iter:
try:
next(iterator)
except StopIteration:
pass
else:
raise RuntimeError(
"pandas iterator UDF should exhaust the input "
"iterator.")
if num_output_rows != num_input_rows:
raise RuntimeError(
"The length of output in Scalar iterator pandas UDF should be "
"the same with the input's; however, the length of output was %d and the "
"length of input was %d." %
(num_output_rows, num_input_rows))
# profiling is not supported for UDF
return func, None, ser, ser
def extract_key_value_indexes(grouped_arg_offsets):
"""
Helper function to extract the key and value indexes from arg_offsets for the grouped and
cogrouped pandas udfs. See BasePandasGroupExec.resolveArgOffsets for equivalent scala code.
Parameters
----------
grouped_arg_offsets: list
List containing the key and value indexes of columns of the
DataFrames to be passed to the udf. It consists of n repeating groups where n is the
number of DataFrames. Each group has the following format:
group[0]: length of group
group[1]: length of key indexes
group[2.. group[1] +2]: key attributes
group[group[1] +3 group[0]]: value attributes
"""
parsed = []
idx = 0
while idx < len(grouped_arg_offsets):
offsets_len = grouped_arg_offsets[idx]
idx += 1
offsets = grouped_arg_offsets[idx:idx + offsets_len]
split_index = offsets[0] + 1
offset_keys = offsets[1:split_index]
offset_values = offsets[split_index:]
parsed.append([offset_keys, offset_values])
idx += offsets_len
return parsed
if eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
# We assume there is only one UDF here because grouped map doesn't
# support combining multiple UDFs.
assert num_udfs == 1
# See FlatMapGroupsInPandasExec for how arg_offsets are used to
# distinguish between grouping attributes and data attributes
arg_offsets, f = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=0)
parsed_offsets = extract_key_value_indexes(arg_offsets)
# Create function like this:
# mapper a: f([a[0]], [a[0], a[1]])
def mapper(a):
keys = [a[o] for o in parsed_offsets[0][0]]
vals = [a[o] for o in parsed_offsets[0][1]]
return f(keys, vals)
elif eval_type == PythonEvalType.SQL_COGROUPED_MAP_PANDAS_UDF:
# We assume there is only one UDF here because cogrouped map doesn't
# support combining multiple UDFs.
assert num_udfs == 1
arg_offsets, f = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=0)
parsed_offsets = extract_key_value_indexes(arg_offsets)
def mapper(a):
df1_keys = [a[0][o] for o in parsed_offsets[0][0]]
df1_vals = [a[0][o] for o in parsed_offsets[0][1]]
df2_keys = [a[1][o] for o in parsed_offsets[1][0]]
df2_vals = [a[1][o] for o in parsed_offsets[1][1]]
return f(df1_keys, df1_vals, df2_keys, df2_vals)
else:
udfs = []
for i in range(num_udfs):
udfs.append(
read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=i))
def mapper(a):
result = tuple(
f(*[a[o] for o in arg_offsets]) for (arg_offsets, f) in udfs)
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
if len(result) == 1:
return result[0]
else:
return result
func = lambda _, it: map(mapper, it)
# profiling is not supported for UDF
return func, None, ser, ser
def launch_gateway():
SPARK_HOME = os.environ["SPARK_HOME"]
if "PYSPARK_GATEWAY_PORT" in os.environ:
gateway_port = int(os.environ["PYSPARK_GATEWAY_PORT"])
else:
# Launch the Py4j gateway using Spark's run command so that we pick up the
# proper classpath and settings from spark-env.sh
on_windows = platform.system() == "Windows"
script = "./bin/spark-submit.cmd" if on_windows else "./bin/spark-submit"
submit_args = os.environ.get("PYSPARK_SUBMIT_ARGS", "pyspark-shell")
command = [os.path.join(SPARK_HOME, script)] + shlex.split(submit_args)
# Start a socket that will be used by PythonGatewayServer to communicate its port to us
callback_socket = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
callback_socket.bind(('127.0.0.1', 0))
callback_socket.listen(1)
callback_host, callback_port = callback_socket.getsockname()
env = dict(os.environ)
env['_PYSPARK_DRIVER_CALLBACK_HOST'] = callback_host
env['_PYSPARK_DRIVER_CALLBACK_PORT'] = str(callback_port)
# Launch the Java gateway.
# We open a pipe to stdin so that the Java gateway can die when the pipe is broken
if not on_windows:
# Don't send ctrl-c / SIGINT to the Java gateway:
def preexec_func():
signal.signal(signal.SIGINT, signal.SIG_IGN)
proc = Popen(command, stdin=PIPE, preexec_fn=preexec_func, env=env)
else:
# preexec_fn not supported on Windows
proc = Popen(command, stdin=PIPE, env=env)
gateway_port = None
# We use select() here in order to avoid blocking indefinitely if the subprocess dies
# before connecting
while gateway_port is None and proc.poll() is None:
timeout = 1 # (seconds)
readable, _, _ = select.select([callback_socket], [], [], timeout)
if callback_socket in readable:
gateway_connection = callback_socket.accept()[0]
# Determine which ephemeral port the server started on:
gateway_port = read_int(gateway_connection.makefile())
gateway_connection.close()
callback_socket.close()
if gateway_port is None:
raise Exception("Java gateway process exited before sending the driver its port number")
# In Windows, ensure the Java child processes do not linger after Python has exited.
# In UNIX-based systems, the child process can kill itself on broken pipe (i.e. when
# the parent process' stdin sends an EOF). In Windows, however, this is not possible
# because java.lang.Process reads directly from the parent process' stdin, contending
# with any opportunity to read an EOF from the parent. Note that this is only best
# effort and will not take effect if the python process is violently terminated.
if on_windows:
# In Windows, the child process here is "spark-submit.cmd", not the JVM itself
# (because the UNIX "exec" command is not available). This means we cannot simply
# call proc.kill(), which kills only the "spark-submit.cmd" process but not the
# JVMs. Instead, we use "taskkill" with the tree-kill option "/t" to terminate all
# child processes in the tree (http://technet.microsoft.com/en-us/library/bb491009.aspx)
def killChild():
Popen(["cmd", "/c", "taskkill", "/f", "/t", "/pid", str(proc.pid)])
atexit.register(killChild)
# Connect to the gateway
gateway = JavaGateway(GatewayClient(port=gateway_port), auto_convert=False)
# Import the classes used by PySpark
java_import(gateway.jvm, "org.apache.spark.SparkConf")
java_import(gateway.jvm, "org.apache.spark.api.java.*")
java_import(gateway.jvm, "org.apache.spark.api.python.*")
java_import(gateway.jvm, "org.apache.spark.mllib.api.python.*")
# TODO(davies): move into sql
java_import(gateway.jvm, "org.apache.spark.sql.*")
java_import(gateway.jvm, "org.apache.spark.sql.hive.*")
java_import(gateway.jvm, "scala.Tuple2")
return gateway
def loads(self, obj):
stream = BytesIO(obj)
key_length = read_int(stream)
key = stream.read(key_length).decode('utf-8')
return (key, _read_vec(stream))
def manager():
# Create a new process group to corral our children
os.setpgid(0, 0)
# Create a listening socket on the AF_INET loopback interface
listen_sock = socket.socket(AF_INET, SOCK_STREAM)
listen_sock.bind(('127.0.0.1', 0))
listen_sock.listen(max(1024, SOMAXCONN))
listen_host, listen_port = listen_sock.getsockname()
write_int(listen_port, sys.stdout)
def shutdown(code):
signal.signal(SIGTERM, SIG_DFL)
# Send SIGHUP to notify workers of shutdown
os.kill(0, SIGHUP)
exit(code)
def handle_sigterm(*args):
shutdown(1)
signal.signal(SIGTERM, handle_sigterm) # Gracefully exit on SIGTERM
signal.signal(SIGHUP, SIG_IGN) # Don't die on SIGHUP
# Cleanup zombie children
def handle_sigchld(*args):
try:
pid, status = os.waitpid(0, os.WNOHANG)
if status != 0:
msg = "worker %s crashed abruptly with exit status %s" % (
pid, status)
print >> sys.stderr, msg
except EnvironmentError as err:
if err.errno not in (ECHILD, EINTR):
raise
signal.signal(SIGCHLD, handle_sigchld)
# Initialization complete
sys.stdout.close()
try:
while True:
try:
ready_fds = select.select([0, listen_sock], [], [])[0]
except select.error as ex:
if ex[0] == EINTR:
continue
else:
raise
if 0 in ready_fds:
try:
worker_pid = read_int(sys.stdin)
except EOFError:
# Spark told us to exit by closing stdin
shutdown(0)
try:
os.kill(worker_pid, signal.SIGKILL)
except OSError:
pass # process already died
if listen_sock in ready_fds:
sock, addr = listen_sock.accept()
# Launch a worker process
try:
pid = os.fork()
if pid == 0:
listen_sock.close()
try:
worker(sock)
except:
traceback.print_exc()
os._exit(1)
else:
os._exit(0)
else:
sock.close()
except OSError as e:
print >> sys.stderr, "Daemon failed to fork PySpark worker: %s" % e
outfile = os.fdopen(os.dup(sock.fileno()), "a+", 65536)
write_int(-1, outfile) # Signal that the fork failed
outfile.flush()
outfile.close()
sock.close()
finally:
shutdown(1)
def read_udfs(pickleSer, infile, eval_type):
runner_conf = {}
if eval_type in (PythonEvalType.SQL_SCALAR_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF,
PythonEvalType.SQL_WINDOW_AGG_PANDAS_UDF):
# Load conf used for pandas_udf evaluation
num_conf = read_int(infile)
for i in range(num_conf):
k = utf8_deserializer.loads(infile)
v = utf8_deserializer.loads(infile)
runner_conf[k] = v
# NOTE: if timezone is set here, that implies respectSessionTimeZone is True
timezone = runner_conf.get("spark.sql.session.timeZone", None)
safecheck = runner_conf.get("spark.sql.execution.pandas.arrowSafeTypeConversion",
"false").lower() == 'true'
# NOTE: this is duplicated from wrap_grouped_map_pandas_udf
assign_cols_by_name = runner_conf.get(
"spark.sql.legacy.execution.pandas.groupedMap.assignColumnsByName", "true")\
.lower() == "true"
ser = ArrowStreamPandasSerializer(timezone, safecheck, assign_cols_by_name)
else:
ser = BatchedSerializer(PickleSerializer(), 100)
num_udfs = read_int(infile)
udfs = {}
call_udf = []
mapper_str = ""
if eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
# Create function like this:
# lambda a: f([a[0]], [a[0], a[1]])
# We assume there is only one UDF here because grouped map doesn't
# support combining multiple UDFs.
assert num_udfs == 1
# See FlatMapGroupsInPandasExec for how arg_offsets are used to
# distinguish between grouping attributes and data attributes
arg_offsets, udf = read_single_udf(
pickleSer, infile, eval_type, runner_conf, udf_index=0)
udfs['f'] = udf
split_offset = arg_offsets[0] + 1
arg0 = ["a[%d]" % o for o in arg_offsets[1: split_offset]]
arg1 = ["a[%d]" % o for o in arg_offsets[split_offset:]]
mapper_str = "lambda a: f([%s], [%s])" % (", ".join(arg0), ", ".join(arg1))
else:
# Create function like this:
# lambda a: (f0(a[0]), f1(a[1], a[2]), f2(a[3]))
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(
pickleSer, infile, eval_type, runner_conf, udf_index=i)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
# profiling is not supported for UDF
return func, None, ser, ser
def read_udfs(pickleSer, infile, eval_type):
runner_conf = {}
if eval_type in (PythonEvalType.SQL_SCALAR_PANDAS_UDF,
PythonEvalType.SQL_COGROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF,
PythonEvalType.SQL_MAP_PANDAS_ITER_UDF,
PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF,
PythonEvalType.SQL_GROUPED_AGG_PANDAS_UDF,
PythonEvalType.SQL_WINDOW_AGG_PANDAS_UDF):
# Load conf used for pandas_udf evaluation
num_conf = read_int(infile)
for i in range(num_conf):
k = utf8_deserializer.loads(infile)
v = utf8_deserializer.loads(infile)
runner_conf[k] = v
# NOTE: if timezone is set here, that implies respectSessionTimeZone is True
timezone = runner_conf.get("spark.sql.session.timeZone", None)
safecheck = runner_conf.get(
"spark.sql.execution.pandas.arrowSafeTypeConversion",
"false").lower() == 'true'
# Used by SQL_GROUPED_MAP_PANDAS_UDF and SQL_SCALAR_PANDAS_UDF when returning StructType
assign_cols_by_name = runner_conf.get(
"spark.sql.legacy.execution.pandas.groupedMap.assignColumnsByName", "true")\
.lower() == "true"
if eval_type == PythonEvalType.SQL_COGROUPED_MAP_PANDAS_UDF:
ser = CogroupUDFSerializer(timezone, safecheck,
assign_cols_by_name)
else:
# Scalar Pandas UDF handles struct type arguments as pandas DataFrames instead of
# pandas Series. See SPARK-27240.
df_for_struct = (
eval_type == PythonEvalType.SQL_SCALAR_PANDAS_UDF
or eval_type == PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF
or eval_type == PythonEvalType.SQL_MAP_PANDAS_ITER_UDF)
ser = ArrowStreamPandasUDFSerializer(timezone, safecheck,
assign_cols_by_name,
df_for_struct)
else:
ser = BatchedSerializer(PickleSerializer(), 100)
num_udfs = read_int(infile)
is_scalar_iter = eval_type == PythonEvalType.SQL_SCALAR_PANDAS_ITER_UDF
is_map_iter = eval_type == PythonEvalType.SQL_MAP_PANDAS_ITER_UDF
if is_scalar_iter or is_map_iter:
if is_scalar_iter:
assert num_udfs == 1, "One SCALAR_ITER UDF expected here."
if is_map_iter:
assert num_udfs == 1, "One MAP_ITER UDF expected here."
arg_offsets, udf = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=0)
def func(_, iterator):
num_input_rows = [0]
def map_batch(batch):
udf_args = [batch[offset] for offset in arg_offsets]
num_input_rows[0] += len(udf_args[0])
if len(udf_args) == 1:
return udf_args[0]
else:
return tuple(udf_args)
iterator = map(map_batch, iterator)
result_iter = udf(iterator)
num_output_rows = 0
for result_batch, result_type in result_iter:
num_output_rows += len(result_batch)
assert is_map_iter or num_output_rows <= num_input_rows[0], \
"Pandas MAP_ITER UDF outputted more rows than input rows."
yield (result_batch, result_type)
if is_scalar_iter:
try:
next(iterator)
except StopIteration:
pass
else:
raise RuntimeError(
"SQL_SCALAR_PANDAS_ITER_UDF should exhaust the input "
"iterator.")
if is_scalar_iter and num_output_rows != num_input_rows[0]:
raise RuntimeError(
"The number of output rows of pandas iterator UDF should be "
"the same with input rows. The input rows number is %d but the "
"output rows number is %d." %
(num_input_rows[0], num_output_rows))
# profiling is not supported for UDF
return func, None, ser, ser
def extract_key_value_indexes(grouped_arg_offsets):
"""
Helper function to extract the key and value indexes from arg_offsets for the grouped and
cogrouped pandas udfs. See BasePandasGroupExec.resolveArgOffsets for equivalent scala code.
:param grouped_arg_offsets: List containing the key and value indexes of columns of the
DataFrames to be passed to the udf. It consists of n repeating groups where n is the
number of DataFrames. Each group has the following format:
group[0]: length of group
group[1]: length of key indexes
group[2.. group[1] +2]: key attributes
group[group[1] +3 group[0]]: value attributes
"""
parsed = []
idx = 0
while idx < len(grouped_arg_offsets):
offsets_len = grouped_arg_offsets[idx]
idx += 1
offsets = grouped_arg_offsets[idx:idx + offsets_len]
split_index = offsets[0] + 1
offset_keys = offsets[1:split_index]
offset_values = offsets[split_index:]
parsed.append([offset_keys, offset_values])
idx += offsets_len
return parsed
udfs = {}
call_udf = []
mapper_str = ""
if eval_type == PythonEvalType.SQL_GROUPED_MAP_PANDAS_UDF:
# Create function like this:
# lambda a: f([a[0]], [a[0], a[1]])
# We assume there is only one UDF here because grouped map doesn't
# support combining multiple UDFs.
assert num_udfs == 1
# See FlatMapGroupsInPandasExec for how arg_offsets are used to
# distinguish between grouping attributes and data attributes
arg_offsets, udf = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=0)
udfs['f'] = udf
parsed_offsets = extract_key_value_indexes(arg_offsets)
keys = ["a[%d]" % (o, ) for o in parsed_offsets[0][0]]
vals = ["a[%d]" % (o, ) for o in parsed_offsets[0][1]]
mapper_str = "lambda a: f([%s], [%s])" % (", ".join(keys),
", ".join(vals))
elif eval_type == PythonEvalType.SQL_COGROUPED_MAP_PANDAS_UDF:
# We assume there is only one UDF here because cogrouped map doesn't
# support combining multiple UDFs.
assert num_udfs == 1
arg_offsets, udf = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=0)
udfs['f'] = udf
parsed_offsets = extract_key_value_indexes(arg_offsets)
df1_keys = ["a[0][%d]" % (o, ) for o in parsed_offsets[0][0]]
df1_vals = ["a[0][%d]" % (o, ) for o in parsed_offsets[0][1]]
df2_keys = ["a[1][%d]" % (o, ) for o in parsed_offsets[1][0]]
df2_vals = ["a[1][%d]" % (o, ) for o in parsed_offsets[1][1]]
mapper_str = "lambda a: f([%s], [%s], [%s], [%s])" % (
", ".join(df1_keys), ", ".join(df1_vals), ", ".join(df2_keys),
", ".join(df2_vals))
else:
# Create function like this:
# lambda a: (f0(a[0]), f1(a[1], a[2]), f2(a[3]))
# In the special case of a single UDF this will return a single result rather
# than a tuple of results; this is the format that the JVM side expects.
for i in range(num_udfs):
arg_offsets, udf = read_single_udf(pickleSer,
infile,
eval_type,
runner_conf,
udf_index=i)
udfs['f%d' % i] = udf
args = ["a[%d]" % o for o in arg_offsets]
call_udf.append("f%d(%s)" % (i, ", ".join(args)))
mapper_str = "lambda a: (%s)" % (", ".join(call_udf))
mapper = eval(mapper_str, udfs)
func = lambda _, it: map(mapper, it)
# profiling is not supported for UDF
return func, None, ser, ser
def manager():
# Create a new process group to corral our children
os.setpgid(0, 0)
# Create a listening socket on the AF_INET loopback interface
listen_sock = socket.socket(AF_INET, SOCK_STREAM)
listen_sock.bind(("127.0.0.1", 0))
listen_sock.listen(max(1024, SOMAXCONN))
listen_host, listen_port = listen_sock.getsockname()
# re-open stdin/stdout in 'wb' mode
stdin_bin = os.fdopen(sys.stdin.fileno(), "rb", 4)
stdout_bin = os.fdopen(sys.stdout.fileno(), "wb", 4)
write_int(listen_port, stdout_bin)
stdout_bin.flush()
def shutdown(code):
signal.signal(SIGTERM, SIG_DFL)
# Send SIGHUP to notify workers of shutdown
os.kill(0, SIGHUP)
sys.exit(code)
def handle_sigterm(*args):
shutdown(1)
signal.signal(SIGTERM, handle_sigterm) # Gracefully exit on SIGTERM
signal.signal(SIGHUP, SIG_IGN) # Don't die on SIGHUP
signal.signal(SIGCHLD, SIG_IGN)
reuse = os.environ.get("SPARK_REUSE_WORKER")
# Initialization complete
try:
while True:
try:
ready_fds = select.select([0, listen_sock], [], [], 1)[0]
except select.error as ex:
if ex[0] == EINTR:
continue
else:
raise
if 0 in ready_fds:
try:
worker_pid = read_int(stdin_bin)
except EOFError:
# Spark told us to exit by closing stdin
shutdown(0)
try:
os.kill(worker_pid, signal.SIGKILL)
except OSError:
pass # process already died
if listen_sock in ready_fds:
try:
sock, _ = listen_sock.accept()
except OSError as e:
if e.errno == EINTR:
continue
raise
# Launch a worker process
try:
pid = os.fork()
except OSError as e:
if e.errno in (EAGAIN, EINTR):
time.sleep(1)
pid = os.fork() # error here will shutdown daemon
else:
outfile = sock.makefile(mode="wb")
write_int(e.errno,
outfile) # Signal that the fork failed
outfile.flush()
outfile.close()
sock.close()
continue
if pid == 0:
# in child process
listen_sock.close()
# It should close the standard input in the child process so that
# Python native function executions stay intact.
#
# Note that if we just close the standard input (file descriptor 0),
# the lowest file descriptor (file descriptor 0) will be allocated,
# later when other file descriptors should happen to open.
#
# Therefore, here we redirects it to '/dev/null' by duplicating
# another file descriptor for '/dev/null' to the standard input (0).
# See SPARK-26175.
devnull = open(os.devnull, "r")
os.dup2(devnull.fileno(), 0)
devnull.close()
try:
# Acknowledge that the fork was successful
outfile = sock.makefile(mode="wb")
write_int(os.getpid(), outfile)
outfile.flush()
outfile.close()
authenticated = False
while True:
code = worker(sock, authenticated)
if code == 0:
authenticated = True
if not reuse or code:
# wait for closing
try:
while sock.recv(1024):
pass
except Exception:
pass
break
gc.collect()
except:
traceback.print_exc()
os._exit(1)
else:
os._exit(0)
else:
sock.close()
finally:
shutdown(1)
def main(infile, outfile):
try:
boot_time = time.time()
split_index = read_int(infile)
if split_index == -1: # for unit tests
exit(-1)
version = utf8_deserializer.loads(infile)
if version != "%d.%d" % sys.version_info[:2]:
raise Exception(("Python in worker has different version %s than that in " +
"driver %s, PySpark cannot run with different minor versions") %
("%d.%d" % sys.version_info[:2], version))
# initialize global state
shuffle.MemoryBytesSpilled = 0
shuffle.DiskBytesSpilled = 0
_accumulatorRegistry.clear()
# fetch name of workdir
spark_files_dir = utf8_deserializer.loads(infile)
SparkFiles._root_directory = spark_files_dir
SparkFiles._is_running_on_worker = True
# fetch names of includes (*.zip and *.egg files) and construct PYTHONPATH
add_path(spark_files_dir) # *.py files that were added will be copied here
num_python_includes = read_int(infile)
for _ in range(num_python_includes):
filename = utf8_deserializer.loads(infile)
add_path(os.path.join(spark_files_dir, filename))
if sys.version > '3':
import importlib
importlib.invalidate_caches()
# fetch names and values of broadcast variables
num_broadcast_variables = read_int(infile)
for _ in range(num_broadcast_variables):
bid = read_long(infile)
if bid >= 0:
path = utf8_deserializer.loads(infile)
_broadcastRegistry[bid] = Broadcast(path=path)
else:
bid = - bid - 1
_broadcastRegistry.pop(bid)
_accumulatorRegistry.clear()
row_based = read_int(infile)
num_commands = read_int(infile)
if row_based:
profiler = None # profiling is not supported for UDF
row_func = None
for i in range(num_commands):
f, returnType, deserializer = read_command(pickleSer, infile)
if row_func is None:
row_func = f
else:
row_func = chain(row_func, f)
serializer = deserializer
func = lambda _, it: map(lambda x: returnType.toInternal(row_func(*x)), it)
else:
assert num_commands == 1
func, profiler, deserializer, serializer = read_command(pickleSer, infile)
init_time = time.time()
def process():
iterator = deserializer.load_stream(infile)
serializer.dump_stream(func(split_index, iterator), outfile)
if profiler:
profiler.profile(process)
else:
process()
except Exception:
try:
write_int(SpecialLengths.PYTHON_EXCEPTION_THROWN, outfile)
write_with_length(traceback.format_exc().encode("utf-8"), outfile)
except IOError:
# JVM close the socket
pass
except Exception:
# Write the error to stderr if it happened while serializing
print("PySpark worker failed with exception:", file=sys.stderr)
print(traceback.format_exc(), file=sys.stderr)
exit(-1)
finish_time = time.time()
report_times(outfile, boot_time, init_time, finish_time)
write_long(shuffle.MemoryBytesSpilled, outfile)
write_long(shuffle.DiskBytesSpilled, outfile)
# Mark the beginning of the accumulators section of the output
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
write_int(len(_accumulatorRegistry), outfile)
for (aid, accum) in _accumulatorRegistry.items():
pickleSer._write_with_length((aid, accum._value), outfile)
# check end of stream
if read_int(infile) == SpecialLengths.END_OF_STREAM:
write_int(SpecialLengths.END_OF_STREAM, outfile)
else:
# write a different value to tell JVM to not reuse this worker
write_int(SpecialLengths.END_OF_DATA_SECTION, outfile)
exit(-1)