def test_compute_taxon_accuracy_all_match(self):
res = compute_taxon_accuracy(pd.Series({
'a;b': 1,
'b;c': 1,
'c;d': 1
}), pd.Series({
'a;b': 1,
'b;c': 1,
'c;d': 1
}))
self.assertEqual(res, (1., 1.))
def test_compute_taxon_accuracy_no_matches(self):
res = compute_taxon_accuracy(
pd.Series({
'a': 1,
'b': 1,
'c': 1
}), pd.Series({
'a;b': 1,
'b;c': 1,
'c;e': 1,
'd;e': 1
}))
self.assertEqual(res, (0., 0.))
def test_compute_taxon_accuracy(self):
res = compute_taxon_accuracy(
pd.Series({
'a;b': 1,
'b;c': 1,
'c;d': 1
}), pd.Series({
'a;b': 1,
'b;c': 1,
'c;e': 1,
'd;e': 1
}))
self.assertEqual(res, (0.6666666666666666, 0.5))