def f(session):
from model_old_schema.reference import RefBad
#Move reftemp to refbad and test that move was successful.
result = move_reftemp_to_refbad(pubmed_id, session)
self.assertTrue(result)
#Test that new refbad is valid.
refbad = get_first(RefBad, pubmed_id=pubmed_id)
test_validity(self, refbad, validate_refbad, session=session, pubmed_id=pubmed_id)
def discard_ref(pmid):
try:
check_for_other_users(current_user.name)
if request.method == "POST":
moved = model.execute(move_reftemp_to_refbad(pmid), current_user.name, commit=True)
if not moved:
raise MoveRefException('An error occurred when deleting the reference for pmid=" + pmid + " from the database.')
#Reference deleted
flash("Reference for pmid=" + pmid + " has been removed from the database.", 'success')
except Exception as e:
flash(e.message, 'error')
return redirect(request.args.get("next") or url_for("reference"))
def discard_ref(pmid):
log_it_info('discard_ref', 'BEGIN', str(pmid))
response = ""
try:
check_for_other_users(current_user.name)
#if request.method == "POST":
moved = model.execute(move_reftemp_to_refbad(pmid), current_user.name, commit=True)
if not moved:
raise MoveRefException('An error occurred when deleting the reference for pmid=" + pmid + " from the database.')
#Reference deleted
response = "Reference for pmid=" + pmid + " has been removed from the database."
log_it_info('discard_ref', 'SUCCESS')
except Exception as e:
response = "Error:<br>" + e.message
log_it_info('discard_ref', 'FAILURE')
logging.error(e.message)
return response
def remove_multiple(pmids):
try:
check_for_other_users(current_user.name)
if request.method == "POST":
to_be_removed = pmids.split('_')
to_be_removed.remove('')
for pmid in to_be_removed:
moved = model.execute(move_reftemp_to_refbad(pmid), current_user.name, commit=True)
if not moved:
raise MoveRefException('An error occurred when deleting the reference for pmid=" + pmid + " from the database.')
#Reference deleted
flash("References for pmids= " + str(to_be_removed) + " have been removed from the database.", 'success')
except Exception as e:
flash(e.message, 'error')
return redirect(request.args.get("next") or url_for("reference"))
