def conformance_test(context, app, job_dict, basedir): job_dict['@type'] = 'Job' job_dict['@id'] = basedir job_dict['app'] = app if not app.outputs: app.outputs = rabix.schema.JsonSchema(context, { 'type': 'object', 'properties': {} }) inputs = rebase_paths(app, job_dict['inputs'], basedir) inputs = get_inputs(app, inputs) dot_update_dict(job_dict['inputs'], inputs) job = context.from_dict(job_dict) adapter = CLIJob(job) print(json.dumps({ 'args': adapter.make_arg_list(), 'stdin': adapter.stdin, 'stdout': adapter.stdout, }))
def conformance_test(context, app, job_dict, basedir): job_dict['class'] = 'Job' job_dict['id'] = basedir job_dict['app'] = app if not app.outputs: app.outputs = [] job_dict['inputs'] = get_inputs(job_dict, app.inputs, basedir) job = Job.from_dict(context, job_dict) adapter = CLIJob(job) result = { 'args': adapter.make_arg_list(), 'stdin': adapter.stdin, 'stdout': adapter.stdout, } cfr = app.get_requirement(CreateFileRequirement) e = ValueResolver(job) if cfr: result['createfiles'] = { name: content for name, content in cfr.resolve_file_defs(e) } print(json.dumps(result))
def conformance_test(context, app, job_dict, basedir): job_dict['class'] = 'Job' job_dict['id'] = basedir job_dict['app'] = app if not app.outputs: app.outputs = [] job_dict['inputs'] = get_inputs(job_dict, app.inputs, basedir) job = Job.from_dict(context, job_dict) adapter = CLIJob(job) print(json.dumps({ 'args': adapter.make_arg_list(), 'stdin': adapter.stdin, 'stdout': adapter.stdout, }))
def conformance_test(context, app, job_dict, basedir): job_dict['class'] = 'Job' job_dict['id'] = basedir job_dict['app'] = app if not app.outputs: app.outputs = [] job_dict['inputs'] = get_inputs(job_dict, app.inputs, basedir) job = Job.from_dict(context, job_dict) adapter = CLIJob(job) print( json.dumps({ 'args': adapter.make_arg_list(), 'stdin': adapter.stdin, 'stdout': adapter.stdout, }))
def conformance_test(context, app, job_dict, basedir): job_dict['@type'] = 'Job' job_dict['@id'] = basedir job_dict['app'] = app if not app.outputs: app.outputs = rabix.schema.JsonSchema(context, { 'type': 'object', 'properties': {} }) job_dict['inputs'] = get_inputs(app, job_dict['inputs'], basedir) job = context.from_dict(job_dict) adapter = CLIJob(job) print(json.dumps({ 'args': adapter.make_arg_list(), 'stdin': adapter.stdin, 'stdout': adapter.stdout, }))