def test_initial(self):
for strat, srp in self.rp[['T1w']]:
anatomical_image = srp[R('T1w')]
file_basename = PythonJob(function=basename)
file_basename.path = anatomical_image
srp[R('T1w', label='base')] = file_basename.path
srp[R('T1w', label='dir')] = file_basename.dirname
file_reversed = PythonJob(function=reversed_string)
file_reversed.path = file_basename.path
srp[R('T1w', label='baserev')] = file_reversed.reversed
filename_subject_id = PythonJob(function=subject_id)
filename_subject_id.filename = file_basename.path
srp[R('T1w', label='sub')] = filename_subject_id.sub
file_join_path = PythonJob(function=join_path)
file_join_path.dirname = file_basename.dirname
file_join_path.base = file_reversed.reversed
srp[R('T1w', label='crazypath')] = file_join_path.path
for executor in executors[1:]:
res_rp = DependencySolver(self.rp).execute(executor=executor())
self.assertIn(R('sub-A00008326_ses-BAS1_label-base_T1w'), res_rp)
self.assertEqual(res_rp[R('sub-A00008326_ses-BAS1_label-base_T1w')].content, A00008326_base)
self.assertEqual(res_rp[R('sub-A00008326_ses-BAS1_label-baserev_T1w')].content, A00008326_base[::-1])
self.assertEqual(res_rp[R('sub-A00008326_ses-BAS1_label-sub_T1w')].content, 'sub-A00008326')
self.assertEqual(res_rp[R('sub-A00008326_ses-BAS1_label-crazypath_T1w')].content,
f'{A00008326_dir}/{A00008326_base[::-1]}')
self.assertIn(R('sub-A00008399_ses-BAS1_label-base_T1w'), res_rp)
self.assertEqual(res_rp[R('sub-A00008399_ses-BAS1_label-base_T1w')].content, A00008399_base)
self.assertEqual(res_rp[R('sub-A00008399_ses-BAS1_label-baserev_T1w')].content, A00008399_base[::-1])
self.assertEqual(res_rp[R('sub-A00008399_ses-BAS1_label-sub_T1w')].content, 'sub-A00008399')
self.assertEqual(res_rp[R('sub-A00008399_ses-BAS1_label-crazypath_T1w')].content,
f'{A00008399_dir}/{A00008399_base[::-1]}')
def test_intermediary(self):
for strat, srp in self.rp[[
R('T1w'),
]]:
anatomical_image = srp[R('T1w')]
file_basename = PythonJob(function=basename)
file_basename.path = anatomical_image
srp[R('T1w', label='base')] = file_basename.path
srp[R('T1w', label='dir')] = file_basename.dirname
file_reversed = PythonJob(function=reversed_string)
file_reversed.path = file_basename.path
filename_subject_id = PythonJob(function=subject_id)
filename_subject_id.filename = file_basename.path
file_join_path = PythonJob(function=join_path)
file_join_path.dirname = file_basename.dirname
file_join_path.base = file_reversed.reversed
srp[R('T1w', label='crazypath')] = file_join_path.path
# Create footprint for file_reversed, filename_subject_id and file_join_path
# Since file_join_path is cached, file_reversed and filename_subject_id should not execute
#
# * Requires a ExecutionLogger
# * Maybe this policy could be parametrized
res_rp = DependencySolver(self.rp).execute(executor=Execution())
self.assertIn(R('sub-A00008326_ses-BAS1_label-base_T1w'), res_rp)
self.assertEqual(res_rp[R('sub-A00008326_ses-BAS1_label-crazypath_T1w')].content,
f'{A00008326_dir}/{A00008326_base[::-1]}')
self.assertIn(R('sub-A00008399_ses-BAS1_label-base_T1w'), res_rp)
self.assertEqual(res_rp[R('sub-A00008399_ses-BAS1_label-crazypath_T1w')].content,
f'{A00008399_dir}/{A00008399_base[::-1]}')