def __init__(self, obj, stringsasfactor=False, checknames=False):
""" Create a new data frame.
:param obj: object inheriting from rpy2.rinterface.SexpVector,
or inheriting from TaggedList or a mapping name -> value
:param stringsasfactors: Boolean indicating whether vectors
of strings should be turned to vectors. Note that factors
will not be turned to string vectors.
:param checknames: Boolean indicating whether column names
should be transformed to R syntactically valid names.
"""
if isinstance(obj, rinterface.ListSexpVector):
if obj.typeof != rinterface.RTYPES.VECSXP:
raise ValueError(
"obj should of typeof RTYPES.VECSXP "
" (and we get %s)" % rinterface.RTYPES(obj.typeof)
)
if (
self._is_list(obj)[0] or
globalenv_ri.find('inherits')(
obj, self._dataframe_name
)[0]
):
# TODO: is it really a good idea to pass R lists
# to the constructor ?
super().__init__(obj)
return
else:
raise ValueError(
"When passing R objects to build a DataFrame, "
"the R object must be a list or inherit from "
"the R class 'data.frame'."
)
elif isinstance(obj, rlc.TaggedList):
kv = [(k, conversion.py2rpy(v)) for k, v in obj.items()]
else:
try:
kv = [(str(k), conversion.py2rpy(v)) for k, v in obj.items()]
except AttributeError:
raise ValueError(
'obj can only be'
'an instance of rpy2.rinterface.ListSexpVector, '
'an instance of TaggedList, '
'or an objects with a methods items() that returns '
'(key, value) pairs '
'(such a Python dict, rpy2.rlike.container OrdDict).')
# Check if there is a conflicting column name
if 'stringsAsFactors' in (k for k, v in kv):
warnings.warn('The column name "stringsAsFactors" is '
'conflicting with named parameter '
'in underlying R function "data.frame()".')
else:
kv.extend((('stringsAsFactors', stringsasfactor),
('check.names', checknames)))
# Call R's data frame constructor
kv = tuple(kv)
df = baseenv_ri.find("data.frame").rcall(kv, globalenv_ri)
super().__init__(df)
def __init__(self, obj, stringsasfactor=False):
""" Create a new data frame.
:param obj: object inheriting from rpy2.rinterface.SexpVector,
or inheriting from TaggedList
or a mapping name -> value
:param stringsasfactors: Boolean indicating whether vectors
of strings should be turned to vectors. Note
that factors will not be turned to string vectors.
"""
if isinstance(obj, rinterface.ListSexpVector):
if obj.typeof != rinterface.RTYPES.VECSXP:
raise ValueError("obj should of typeof RTYPES.VECSXP"+\
" (and we get %s)" % rinterface.RTYPES(obj.typeof))
if self._is_list(obj)[0] or \
globalenv_ri.find('inherits')(obj, self._dataframe_name)[0]:
#FIXME: is it really a good idea to pass R lists
# to the constructor ?
super().__init__(obj)
return
else:
raise ValueError(
"When passing R objects to build a DataFrame," +\
" the R object must be a list or inherit from" +\
" the R class 'data.frame'")
elif isinstance(obj, rlc.TaggedList):
kv = [(k, conversion.py2rpy(v)) for k, v in obj.items()]
else:
try:
kv = [(str(k), conversion.py2rpy(obj[k])) for k in obj]
except TypeError:
raise ValueError(
"obj can be either " +
"an instance of an iter-able class" +
"(such a Python dict, rpy2.rlike.container OrdDict" +
" or an instance of rpy2.rinterface.SexpVector" +
" of type VECSXP")
# Check if there is a conflicting column name
if 'stringsAsFactors' in (k for k, v in kv):
warnings.warn('The column name "stringsAsFactors" is '
'conflicting with named parameter '
'in underlying R function "data.frame()".')
else:
kv.append(('stringsAsFactors', stringsasfactor))
# Call R's data frame constructor
kv = tuple(kv)
df = baseenv_ri.find("data.frame").rcall(kv, globalenv_ri)
super().__init__(df)