Esempi in Python per set_matplotlib_parameters

Esempio n. 1

File: simulate.py Progetto: matthiaskoenig/sbmlutils

"""
Run toy model simulations.
"""
import os
import logging
import pandas as pd
from matplotlib import pyplot as plt

from sbmlutils.dfba.toy_wholecell import settings
from sbmlutils.dfba.simulator import simulate_dfba, analyse_uniqueness
from sbmlutils.dfba.analysis import DFBAAnalysis
from sbmlutils.dfba.utils import versioned_directory
from sbmlutils.dfba.analysis import set_matplotlib_parameters

set_matplotlib_parameters()


def print_species(dfs, filepath=None, **kwargs):
    """ Print toy species.

    :param filepath:
    :param df:
    :return:
    """
    if 'marker' not in kwargs:
        kwargs['marker'] = 's'
    if 'linestyle' not in kwargs:
        kwargs['linestyle'] = '-'

    # check if single DataFrame
    if type(dfs) == pd.DataFrame:

Esempio n. 2

"""
Run toy_atp model simulations.
"""
import os
import logging
import pandas as pd
from matplotlib import pyplot as plt

from sbmlutils.dfba.toy_atp import settings, model_factory
from sbmlutils.dfba.simulator import simulate_dfba, analyse_uniqueness
from sbmlutils.dfba.analysis import DFBAAnalysis
from sbmlutils.dfba.utils import versioned_directory
from sbmlutils.dfba.analysis import set_matplotlib_parameters

set_matplotlib_parameters()


def print_species(dfs, filepath=None, **kwargs):
    """ Print toy atp species.

    :param filepath:
    :param df:
    :return:
    """
    if 'marker' not in kwargs:
        kwargs['marker'] = 's'
    if 'linestyle' not in kwargs:
        kwargs['linestyle'] = '-'

    # check if single DataFrame
    if type(dfs) == pd.DataFrame: