def test_write(self):
with tempfile.TemporaryDirectory() as tempdir:
outbase = os.path.join(tempdir, 'trashme')
scidata.write(self.ds,
self.ds.data,
outbase=outbase,
filetype='png')
assert len(glob.glob(outbase + '*')) >= 1
def test004_get_size(self):
with tempfile.TemporaryDirectory() as tempdir:
outbase = os.path.join(tempdir, 'trashme')
scidata.write(self.ds,
self.ds.data,
outbase=outbase,
filetype='montage')
outfile = os.path.join(tempdir, os.listdir(tempdir)[0])
ok_(scidata.medimg.montage.get_info(outfile)) # gets made?
def test003_write_pyrdb(self):
with tempfile.TemporaryDirectory() as tempdir:
outbase = os.path.join(tempdir, 'trashme')
ok_(
scidata.write(self.ds,
self.ds.data,
outbase=outbase,
filetype='montage',
mtype='sqlite'))
def test005_get_tile(self):
with tempfile.TemporaryDirectory() as tempdir:
outbase = os.path.join(tempdir, 'trashme')
scidata.write(self.ds,
self.ds.data,
outbase=outbase,
filetype='montage')
outfile = os.path.join(tempdir, os.listdir(tempdir)[0])
ok_(scidata.medimg.montage.get_tile(outfile, 0, 0,
0)) # all montage have 0, 0, 0
def test002_write_dir(self):
"""directory jpeg montage"""
with tempfile.TemporaryDirectory() as tempdir:
outbase = os.path.join(tempdir, 'trashme')
ok_(
scidata.write(self.ds,
self.ds.data,
outbase=outbase,
filetype='montage',
mtype='dir'))