def upgrade8to9(setupTool):
_logger.info('Upgrading EDRN Public Portal from profile version 8 to profile version 9')
portal = _getPortal(setupTool)
request = portal.REQUEST
catalog = getToolByName(portal, 'portal_catalog')
_logger.info("Disabling schema extender's cache")
from archetypes.schemaextender.extender import disableCache
disableCache(request)
qi = getToolByName(portal, 'portal_quickinstaller')
propTool = getToolByName(portal, 'portal_properties')
propTool.site_properties.getProperty('enable_link_integrity_checks', True)
contentRuleStorage = getUtility(IRuleStorage)
_logger.info('Disabling link integrity checks')
propTool.site_properties.manage_changeProperties(enable_link_integrity_checks=False)
_logger.info('Disabling content rules')
contentRuleStorage.active = False
qi.upgradeProduct('eke.publications')
qi.upgradeProduct('eke.biomarker')
disablePublicationsPortlets(portal)
_logger.info('Ingesting everything fully')
portal.unrestrictedTraverse('@@ingestEverythingFully')()
_logger.info('Clearing ingest paths to prevent automatic ingest')
if portal.hasProperty('edrnIngestPaths'):
portal.manage_delProperties(['edrnIngestPaths'])
_logger.info('Resetting portal "from" email address')
portal.manage_changeProperties(email_from_address='*****@*****.**')
_logger.info('Clearing, finding, and re-building the catalog')
catalog.clearFindAndRebuild()
uidCatalog = getToolByName(portal, 'uid_catalog')
_logger.info('Rebuilding the UID catalog')
uidCatalog.manage_rebuildCatalog()
transaction.commit()
_logger.info('Upgrade 8-to-9 complete')
def upgrade9to10(setupTool):
_logger.info('Upgrading EDRN Public Portal from profile version 9 to profile version 10')
portal = _getPortal(setupTool)
request = portal.REQUEST
catalog, setup = getToolByName(portal, 'portal_catalog'), getToolByName(portal, 'portal_setup')
_logger.info("Disabling schema extender's cache")
from archetypes.schemaextender.extender import disableCache
disableCache(request)
qi = getToolByName(portal, 'portal_quickinstaller')
propTool = getToolByName(portal, 'portal_properties')
propTool.site_properties.getProperty('enable_link_integrity_checks', True)
contentRuleStorage = getUtility(IRuleStorage)
_logger.info('Disabling link integrity checks')
propTool.site_properties.manage_changeProperties(enable_link_integrity_checks=False)
_logger.info('Disabling content rules')
contentRuleStorage.active = False
# No, decided not to write secretome with Plone:
# qi.installProduct('eke.secretome')
# setup.runAllImportStepsFromProfile('profile-eke.secretome:default')
disablePublicationsPortlets(portal)
# Set the new bmuDataSource on biomarkers, but not on testing (this is ugly)
if 'biomarkers' in portal.keys():
import socket
if not socket.gethostname().startswith('tumor'):
b = portal['biomarkers']
b.bmuDataSource = 'http://edrn.jpl.nasa.gov/cancerdataexpo/rdf-data/biomuta/@@rdf'
_logger.info('Ingesting everything fully')
portal.unrestrictedTraverse('@@ingestEverythingFully')()
_logger.info('Clearing ingest paths to prevent automatic ingest')
if portal.hasProperty('edrnIngestPaths'):
portal.manage_delProperties(['edrnIngestPaths'])
_logger.info('Resetting portal "from" email address')
portal.manage_changeProperties(email_from_address='*****@*****.**')
_logger.info('Clearing, finding, and re-building the catalog')
catalog.clearFindAndRebuild()
uidCatalog = getToolByName(portal, 'uid_catalog')
_logger.info('Rebuilding the UID catalog')
uidCatalog.manage_rebuildCatalog()
transaction.commit()
_logger.info('Upgrade 9-to-10 complete')
