Esempio n. 1
0
    def testSynchronizeObject(self):
        filename = _tmpDirectory + "/data.h5"
        h5 = h5py.File(filename)
        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(h5)
        self.assertEquals(model.rowCount(qt.QModelIndex()), 1)
        index = model.index(0, 0, qt.QModelIndex())
        node1 = model.nodeFromIndex(index)
        model.synchronizeH5pyObject(h5)
        self.waitForPendingOperations(model)
        # Now h5 was loaded from it's filename
        # Another ref is owned by the model
        h5.close()

        index = model.index(0, 0, qt.QModelIndex())
        node2 = model.nodeFromIndex(index)
        self.assertIsNot(node1, node2)
        # after sync
        time.sleep(0.1)
        self.qapp.processEvents()
        time.sleep(0.1)
        index = model.index(0, 0, qt.QModelIndex())
        self.assertIsInstance(model.nodeFromIndex(index),
                              hdf5.Hdf5Item.Hdf5Item)
        # clean up
        index = model.index(0, 0, qt.QModelIndex())
        h5File = model.data(index, hdf5.Hdf5TreeModel.H5PY_OBJECT_ROLE)
        self.assertIsNotNone(h5File)
        h5File = None
        # delete the model
        ref = weakref.ref(model)
        model = None
        self.qWaitForDestroy(ref)
Esempio n. 2
0
    def testGroupData(self):
        h5 = commonh5.File("/foo/bar/1.mock", "w")
        d = h5.create_group("foo")
        d.attrs["desc"] = "fooo"

        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(d)
        displayed = self.getRowDataAsDict(model, row=0)
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.NAME_COLUMN, qt.Qt.DisplayRole],
            "1.mock::foo")
        self.assertIsInstance(
            displayed[hdf5.Hdf5TreeModel.NAME_COLUMN, qt.Qt.DecorationRole],
            qt.QIcon)
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.TYPE_COLUMN, qt.Qt.DisplayRole], "")
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.SHAPE_COLUMN, qt.Qt.DisplayRole], "")
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.VALUE_COLUMN, qt.Qt.DisplayRole], "")
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.DESCRIPTION_COLUMN,
                      qt.Qt.DisplayRole], "fooo")
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.NODE_COLUMN, qt.Qt.DisplayRole],
            "Group")
Esempio n. 3
0
    def testDatasetData(self):
        h5 = commonh5.File("/foo/bar/1.mock", "w")
        value = numpy.array([1, 2, 3])
        d = h5.create_dataset("foo", data=value)

        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(d)
        displayed = self.getRowDataAsDict(model, row=0)
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.NAME_COLUMN, qt.Qt.DisplayRole],
            "1.mock::foo")
        self.assertIsInstance(
            displayed[hdf5.Hdf5TreeModel.NAME_COLUMN, qt.Qt.DecorationRole],
            qt.QIcon)
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.TYPE_COLUMN, qt.Qt.DisplayRole],
            value.dtype.name)
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.SHAPE_COLUMN, qt.Qt.DisplayRole], "3")
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.VALUE_COLUMN, qt.Qt.DisplayRole],
            "[1 2 3]")
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.DESCRIPTION_COLUMN,
                      qt.Qt.DisplayRole], "")
        self.assertEquals(
            displayed[hdf5.Hdf5TreeModel.NODE_COLUMN, qt.Qt.DisplayRole],
            "Dataset")
Esempio n. 4
0
 def testRootParent(self):
     model = hdf5.Hdf5TreeModel()
     h5_1 = commonh5.File("/foo/bar/1.mock", "w")
     model.insertH5pyObject(h5_1)
     index = model.index(0, 0, qt.QModelIndex())
     index = model.parent(index)
     self.assertEquals(index, qt.QModelIndex())
Esempio n. 5
0
 def testRemoveObject(self):
     h5 = commonh5.File("/foo/bar/1.mock", "w")
     model = hdf5.Hdf5TreeModel()
     self.assertEquals(model.rowCount(qt.QModelIndex()), 0)
     model.insertH5pyObject(h5)
     self.assertEquals(model.rowCount(qt.QModelIndex()), 1)
     model.removeH5pyObject(h5)
     self.assertEquals(model.rowCount(qt.QModelIndex()), 0)
Esempio n. 6
0
 def testAppendFilename(self):
     model = hdf5.Hdf5TreeModel()
     self.assertEqual(model.rowCount(qt.QModelIndex()), 0)
     model.appendFile(self.filename)
     self.assertEqual(model.rowCount(qt.QModelIndex()), 1)
     # clean up
     ref = weakref.ref(model)
     model = None
     self.qWaitForDestroy(ref)
Esempio n. 7
0
 def testAppendFilename(self):
     with self.h5TempFile() as filename:
         model = hdf5.Hdf5TreeModel()
         self.assertEquals(model.rowCount(qt.QModelIndex()), 0)
         model.appendFile(filename)
         self.assertEquals(model.rowCount(qt.QModelIndex()), 1)
         # clean up
         index = model.index(0, 0, qt.QModelIndex())
         h5File = model.data(index, hdf5.Hdf5TreeModel.H5PY_OBJECT_ROLE)
         h5File.close()
Esempio n. 8
0
 def testCloseFile(self):
     """A file inserted as a filename is open and closed internally."""
     model = hdf5.Hdf5TreeModel()
     self.assertEqual(model.rowCount(qt.QModelIndex()), 0)
     model.insertFile(self.filename)
     self.assertEqual(model.rowCount(qt.QModelIndex()), 1)
     index = model.index(0, 0)
     h5File = model.data(index, role=hdf5.Hdf5TreeModel.H5PY_OBJECT_ROLE)
     model.removeIndex(index)
     self.assertEqual(model.rowCount(qt.QModelIndex()), 0)
     self.assertFalse(bool(h5File.id.valid), "The HDF5 file was not closed")
Esempio n. 9
0
    def setUp(self):
        TestCaseQt.setUp(self)
        self.model = hdf5.Hdf5TreeModel()
        filename = _tmpDirectory + "/data.h5"
        self.h5 = h5py.File(filename)
        self.model.insertH5pyObject(self.h5)

        self.listener = SignalListener()
        self.model.sigH5pyObjectLoaded.connect(self.listener.partial(signal="loaded"))
        self.model.sigH5pyObjectRemoved.connect(self.listener.partial(signal="removed"))
        self.model.sigH5pyObjectSynchronized.connect(self.listener.partial(signal="synchronized"))
Esempio n. 10
0
 def testFileData(self):
     h5 = commonh5.File("/foo/bar/1.mock", "w")
     model = hdf5.Hdf5TreeModel()
     model.insertH5pyObject(h5)
     displayed = self.getRowDataAsDict(model, row=0)
     self.assertEqual(displayed[hdf5.Hdf5TreeModel.NAME_COLUMN, qt.Qt.DisplayRole], "1.mock")
     self.assertIsInstance(displayed[hdf5.Hdf5TreeModel.NAME_COLUMN, qt.Qt.DecorationRole], qt.QIcon)
     self.assertEqual(displayed[hdf5.Hdf5TreeModel.TYPE_COLUMN, qt.Qt.DisplayRole], "")
     self.assertEqual(displayed[hdf5.Hdf5TreeModel.SHAPE_COLUMN, qt.Qt.DisplayRole], "")
     self.assertEqual(displayed[hdf5.Hdf5TreeModel.VALUE_COLUMN, qt.Qt.DisplayRole], "")
     self.assertEqual(displayed[hdf5.Hdf5TreeModel.DESCRIPTION_COLUMN, qt.Qt.DisplayRole], "")
     self.assertEqual(displayed[hdf5.Hdf5TreeModel.NODE_COLUMN, qt.Qt.DisplayRole], "File")
Esempio n. 11
0
    def testSelection_SelectNone(self):
        tree = commonh5.File("/foo/bar/1.mock", "w")

        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(tree)
        view = hdf5.Hdf5TreeView()
        view.setModel(model)
        view.setSelectedH5Node(tree)
        view.setSelectedH5Node(None)

        selection = list(view.selectedH5Nodes())
        self.assertEqual(len(selection), 0)
Esempio n. 12
0
 def testAppendFilename(self):
     filename = _tmpDirectory + "/data.h5"
     model = hdf5.Hdf5TreeModel()
     self.assertEquals(model.rowCount(qt.QModelIndex()), 0)
     model.appendFile(filename)
     self.assertEquals(model.rowCount(qt.QModelIndex()), 1)
     # clean up
     index = model.index(0, 0, qt.QModelIndex())
     h5File = model.data(index, hdf5.Hdf5TreeModel.H5PY_OBJECT_ROLE)
     ref = weakref.ref(model)
     model = None
     self.qWaitForDestroy(ref)
Esempio n. 13
0
    def testUnconsistantTypes(self):
        model = hdf5.Hdf5TreeModel()
        h5 = commonh5.File("/foo/bar/1.mock", "w")
        h5.create_group("aaa100")
        h5.create_group("100aaa")
        model.insertH5pyObject(h5)

        proxy = hdf5.NexusSortFilterProxyModel()
        proxy.setSourceModel(model)
        proxy.sort(0, qt.Qt.AscendingOrder)
        names = self.getChildNames(proxy, proxy.index(0, 0, qt.QModelIndex()))
        self.assertListEqual(names, ["100aaa", "aaa100"])
Esempio n. 14
0
    def testSelection_RootFromSubTree(self):
        tree = commonh5.File("/foo/bar/1.mock", "w")
        group = tree.create_group("a1")
        group.create_group("b/c/d")

        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(group)
        view = hdf5.Hdf5TreeView()
        view.setModel(model)
        view.setSelectedH5Node(group)

        selected = list(view.selectedH5Nodes())[0]
        self.assertIs(group, selected.h5py_object)
Esempio n. 15
0
    def testSelection_Simple(self):
        tree = commonh5.File("/foo/bar/1.mock", "w")
        item = tree.create_group("a/b/c/d")
        item.create_group("e").create_group("f")

        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(tree)
        view = hdf5.Hdf5TreeView()
        view.setModel(model)
        view.setSelectedH5Node(item)

        selected = list(view.selectedH5Nodes())[0]
        self.assertIs(item, selected.h5py_object)
Esempio n. 16
0
 def testDropFirstAsLast(self):
     model = hdf5.Hdf5TreeModel()
     h5_1 = commonh5.File("/foo/bar/1.mock", "w")
     h5_2 = commonh5.File("/foo/bar/2.mock", "w")
     model.insertH5pyObject(h5_1)
     model.insertH5pyObject(h5_2)
     self.assertEquals(self.getItemName(model, 0), "1.mock")
     self.assertEquals(self.getItemName(model, 1), "2.mock")
     index = model.index(0, 0, qt.QModelIndex())
     mimeData = model.mimeData([index])
     model.dropMimeData(mimeData, qt.Qt.MoveAction, 2, 0, qt.QModelIndex())
     self.assertEquals(self.getItemName(model, 0), "2.mock")
     self.assertEquals(self.getItemName(model, 1), "1.mock")
Esempio n. 17
0
    def testNumber(self):
        model = hdf5.Hdf5TreeModel()
        h5 = _mock.File("/foo/bar/1.mock")
        h5.create_group("a1")
        h5.create_group("a20")
        h5.create_group("a3")
        model.insertH5pyObject(h5)

        proxy = hdf5.NexusSortFilterProxyModel()
        proxy.setSourceModel(model)
        proxy.sort(0, qt.Qt.AscendingOrder)
        names = self.getChildNames(proxy, proxy.index(0, 0, qt.QModelIndex()))
        self.assertListEqual(names, ["a1", "a3", "a20"])
Esempio n. 18
0
    def testEndTimeInArray(self):
        model = hdf5.Hdf5TreeModel()
        h5 = _mock.File("/foo/bar/1.mock")
        h5.create_group("a").create_dataset("end_time", numpy.array([numpy.string_("2015")]))
        h5.create_group("b").create_dataset("end_time", numpy.array([numpy.string_("2013")]))
        h5.create_group("c").create_dataset("end_time", numpy.array([numpy.string_("2014")]))
        model.insertH5pyObject(h5)

        proxy = hdf5.NexusSortFilterProxyModel()
        proxy.setSourceModel(model)
        proxy.sort(0, qt.Qt.DescendingOrder)
        names = self.getChildNames(proxy, proxy.index(0, 0, qt.QModelIndex()))
        self.assertListEqual(names, ["a", "c", "b"])
Esempio n. 19
0
    def testSelection_FileFromSubTree(self):
        tree = commonh5.File("/foo/bar/1.mock", "w")
        group = tree.create_group("a1")
        group.create_group("b").create_group("b").create_group("d")

        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(group)
        view = hdf5.Hdf5TreeView()
        view.setModel(model)
        view.setSelectedH5Node(tree)

        selection = list(view.selectedH5Nodes())
        self.assertEquals(len(selection), 0)
Esempio n. 20
0
    def testSelection_NotFound(self):
        tree2 = commonh5.File("/foo/bar/2.mock", "w")
        tree = commonh5.File("/foo/bar/1.mock", "w")
        item = tree.create_group("a/b/c/d")
        item.create_group("e").create_group("f")

        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(tree)
        view = hdf5.Hdf5TreeView()
        view.setModel(model)
        view.setSelectedH5Node(tree2)

        selection = list(view.selectedH5Nodes())
        self.assertEqual(len(selection), 0)
Esempio n. 21
0
    def testNXentryName(self):
        """Test NXentry without start_time  or end_time"""
        model = hdf5.Hdf5TreeModel()
        h5 = commonh5.File("/foo/bar/1.mock", "w")
        create_NXentry(h5, "a")
        create_NXentry(h5, "c")
        create_NXentry(h5, "b")
        model.insertH5pyObject(h5)

        proxy = hdf5.NexusSortFilterProxyModel()
        proxy.setSourceModel(model)
        proxy.sort(0, qt.Qt.AscendingOrder)
        names = self.getChildNames(proxy, proxy.index(0, 0, qt.QModelIndex()))
        self.assertListEqual(names, ["a", "b", "c"])
Esempio n. 22
0
 def testInsertFilename(self):
     try:
         model = hdf5.Hdf5TreeModel()
         self.assertEqual(model.rowCount(qt.QModelIndex()), 0)
         model.insertFile(self.filename)
         self.assertEqual(model.rowCount(qt.QModelIndex()), 1)
         # clean up
         index = model.index(0, 0, qt.QModelIndex())
         h5File = model.data(index, hdf5.Hdf5TreeModel.H5PY_OBJECT_ROLE)
         self.assertIsNotNone(h5File)
     finally:
         ref = weakref.ref(model)
         model = None
         self.qWaitForDestroy(ref)
Esempio n. 23
0
    def testStartTime(self):
        """If it is not NXentry, start_time is not used"""
        model = hdf5.Hdf5TreeModel()
        h5 = commonh5.File("/foo/bar/1.mock", "w")
        h5.create_group("a").create_dataset("start_time", data=numpy.string_("2015"))
        h5.create_group("b").create_dataset("start_time", data=numpy.string_("2013"))
        h5.create_group("c").create_dataset("start_time", data=numpy.string_("2014"))
        model.insertH5pyObject(h5)

        proxy = hdf5.NexusSortFilterProxyModel()
        proxy.setSourceModel(model)
        proxy.sort(0, qt.Qt.AscendingOrder)
        names = self.getChildNames(proxy, proxy.index(0, 0, qt.QModelIndex()))
        self.assertListEqual(names, ["a", "b", "c"])
Esempio n. 24
0
    def testNXentryEndTimeInArray(self):
        """Test NXentry with end_time"""
        model = hdf5.Hdf5TreeModel()
        h5 = commonh5.File("/foo/bar/1.mock", "w")
        create_NXentry(h5, "a").create_dataset("end_time", data=numpy.array([numpy.string_("2015")]))
        create_NXentry(h5, "b").create_dataset("end_time", data=numpy.array([numpy.string_("2013")]))
        create_NXentry(h5, "c").create_dataset("end_time", data=numpy.array([numpy.string_("2014")]))
        model.insertH5pyObject(h5)

        proxy = hdf5.NexusSortFilterProxyModel()
        proxy.setSourceModel(model)
        proxy.sort(0, qt.Qt.DescendingOrder)
        names = self.getChildNames(proxy, proxy.index(0, 0, qt.QModelIndex()))
        self.assertListEqual(names, ["a", "c", "b"])
Esempio n. 25
0
    def testSupportedDrop(self):
        model = hdf5.Hdf5TreeModel()
        self.assertNotEquals(model.supportedDropActions(), 0)

        model.setFileMoveEnabled(False)
        model.setFileDropEnabled(False)
        self.assertEquals(model.supportedDropActions(), 0)

        model.setFileMoveEnabled(False)
        model.setFileDropEnabled(True)
        self.assertNotEquals(model.supportedDropActions(), 0)

        model.setFileMoveEnabled(True)
        model.setFileDropEnabled(False)
        self.assertNotEquals(model.supportedDropActions(), 0)
Esempio n. 26
0
 def testInsertFilenameAsync(self):
     filename = _tmpDirectory + "/data.h5"
     try:
         model = hdf5.Hdf5TreeModel()
         self.assertEqual(model.rowCount(qt.QModelIndex()), 0)
         model.insertFileAsync(filename)
         index = model.index(0, 0, qt.QModelIndex())
         self.assertIsInstance(model.nodeFromIndex(index), hdf5.Hdf5LoadingItem.Hdf5LoadingItem)
         self.waitForPendingOperations(model)
         index = model.index(0, 0, qt.QModelIndex())
         self.assertIsInstance(model.nodeFromIndex(index), hdf5.Hdf5Item.Hdf5Item)
     finally:
         ref = weakref.ref(model)
         model = None
         self.qWaitForDestroy(ref)
Esempio n. 27
0
 def testDropExternalFile(self):
     with self.h5TempFile() as filename:
         model = hdf5.Hdf5TreeModel()
         mimeData = qt.QMimeData()
         mimeData.setUrls([qt.QUrl.fromLocalFile(filename)])
         model.dropMimeData(mimeData, qt.Qt.CopyAction, 0, 0, qt.QModelIndex())
         self.assertEquals(model.rowCount(qt.QModelIndex()), 1)
         # after sync
         time.sleep(0.1)
         self.qapp.processEvents()
         time.sleep(0.1)
         index = model.index(0, 0, qt.QModelIndex())
         self.assertIsInstance(model.nodeFromIndex(index), hdf5.Hdf5Item.Hdf5Item)
         # clean up
         index = model.index(0, 0, qt.QModelIndex())
         h5File = model.data(index, role=hdf5.Hdf5TreeModel.H5PY_OBJECT_ROLE)
         h5File.close()
Esempio n. 28
0
 def testInsertFilenameAsync(self):
     with self.h5TempFile() as filename:
         model = hdf5.Hdf5TreeModel()
         self.assertEquals(model.rowCount(qt.QModelIndex()), 0)
         model.insertFileAsync(filename)
         index = model.index(0, 0, qt.QModelIndex())
         self.assertIsInstance(model.nodeFromIndex(index), hdf5.Hdf5LoadingItem.Hdf5LoadingItem)
         time.sleep(0.1)
         self.qapp.processEvents()
         time.sleep(0.1)
         index = model.index(0, 0, qt.QModelIndex())
         self.assertIsInstance(model.nodeFromIndex(index), hdf5.Hdf5Item.Hdf5Item)
         self.assertEquals(model.rowCount(qt.QModelIndex()), 1)
         # clean up
         index = model.index(0, 0, qt.QModelIndex())
         h5File = model.data(index, hdf5.Hdf5TreeModel.H5PY_OBJECT_ROLE)
         h5File.close()
Esempio n. 29
0
 def testNotCloseFile(self):
     """A file inserted as an h5py object is not open (then not closed)
     internally."""
     filename = _tmpDirectory + "/data.h5"
     try:
         h5File = h5py.File(filename)
         model = hdf5.Hdf5TreeModel()
         self.assertEqual(model.rowCount(qt.QModelIndex()), 0)
         model.insertH5pyObject(h5File)
         self.assertEqual(model.rowCount(qt.QModelIndex()), 1)
         index = model.index(0, 0)
         h5File = model.data(index, role=hdf5.Hdf5TreeModel.H5PY_OBJECT_ROLE)
         model.removeIndex(index)
         self.assertEqual(model.rowCount(qt.QModelIndex()), 0)
         self.assertTrue(bool(h5File.id.valid), "The HDF5 file was unexpetedly closed")
     finally:
         h5File.close()
Esempio n. 30
0
    def testSelection_Tree(self):
        tree1 = commonh5.File("/foo/bar/1.mock", "w")
        tree2 = commonh5.File("/foo/bar/2.mock", "w")
        tree3 = commonh5.File("/foo/bar/3.mock", "w")
        tree1.create_group("a/b/c")
        tree2.create_group("a/b/c")
        tree3.create_group("a/b/c")
        item = tree2

        model = hdf5.Hdf5TreeModel()
        model.insertH5pyObject(tree1)
        model.insertH5pyObject(tree2)
        model.insertH5pyObject(tree3)
        view = hdf5.Hdf5TreeView()
        view.setModel(model)
        view.setSelectedH5Node(item)

        selected = list(view.selectedH5Nodes())[0]
        self.assertIs(item, selected.h5py_object)