def main(argv=None):
params = parse_args(argv)
if params.agents < 1:
raise Exception("Model requires at least two agents, got {} instead."
.format(params.agents))
else:
simulate(**params.__dict__)
def start():
if tamaño.get_value().isdigit() and iteraciones.get_value().isdigit():
tam = int(tamaño.get_value())
it = int(iteraciones.get_value())
if tam > 0 and it > 0:
if tam > int(0.65 * (preferredSize // 2)):
thorpy.launch_blocking_alert(
title="¡Tamaño no soportado!",
text=
"El tamaño actual generaría una grilla con celdas de tamaño cero.",
parent=background)
tamaño.set_value("")
else:
simulation.simulate(tam, it, preferredSize)
else:
thorpy.launch_blocking_alert(title="¡Tamaño no soportado!",
text="El tamaño no es válido.",
parent=background)
else:
thorpy.launch_blocking_alert(
title="¡Valores incorrectos!",
text="Los valores introducidos no son válidos.",
parent=background)
tamaño.set_value("")
iteraciones.set_value("")
def simulation_contact_tracing(n, p, times):
interventions = []
mapping = {
'S': 'QS',
'E': 'QE',
'I1': 'Q1',
'I2': 'Q2',
'I3': 'Q3',
'R': 'R',
'D': 'D',
'Q1': 'Q1',
'Q2': 'Q2',
'Q3': 'Q3',
'QS': 'QS',
'QE': 'QE'
}
for time in times:
interventions.append(
ContactTracingIntervention(["I1", "I2", "I3"], mapping, p, time,)
)
LG = setup_LG(n)
M = QuorontracingModel(0, 0, 0)
c_observer = CountObserver(quolor_palette.keys())
observers = [c_observer]
M.init_states(LG, 5)
simulate(LG, M, interventions, 50, observers) # scale x -axis
return c_observer.data
def test_convergence_orders():
# Do not output the plots at the end of a simulation
parameters.CONST_OUTPUT_PLOT = False
for p in CONST_CONVERGENCE_TEST_P_VALUES:
for ml in CONST_CONVERGENCE_TEST_ML_VALUES:
# Modify the values in parameters.py
parameters.CONST_ML = ml
parameters.CONST_P = p
# Perform the specified type of refinement
if REFINEMENT_TYPE == "PATCHES":
parameters.CONST_NUM_PATCH = parameters.CONST_NUM_PATCH_ML0 * (
2**(parameters.CONST_ML)) # Update the number of patches
parameters.CONST_NUM_BASIS = 12
elif REFINEMENT_TYPE == "KNOT":
parameters.CONST_NUM_PATCH = 2
parameters.CONST_NUM_BASIS = parameters.CONST_NUM_BASIS_ML0 * (
2**(parameters.CONST_ML)
) # Update the number of basis functions
else:
raise ValueError("Unkown REFINEMENT_TYPE")
# Run the simulation
simulation.simulate()
def run_strats(folder, topology, red_mult, black_mult, strat_list, iterations,
runs):
for strat in strat_list:
print(str(strat))
start = time.time()
# prefix = str(strat['threshold']) + '_' + str(strat['portion'])
prefix = ''
if strat.get('threshold') is not None:
prefix = str(strat['threshold']) + '_' + str(strat['portion'])
if prefix:
infection_csv = folder + topology + prefix + strat[
'red_strat'] + strat['black_strat'] + 'infection.csv'
simulate(folder,
topology,
red_mult,
black_mult,
strat,
iterations,
runs,
prefix=prefix)
elapsed_time = time.time() - start
print(elapsed_time)
print()
log_file = folder + 'log.txt'
with open(log_file, 'a') as f:
f.write(str(strat) + '\n')
f.write(str(elapsed_time) + '\n')
f.write('\n')
def robustness_delta(init_parameters, velocity, model, control, timespan,goals):
phi, delta, d_phi, d_delta = init_parameters
init_pkg = {'phi': phi, 'delta': delta, 'd_phi': d_phi, 'd_delta': d_delta}
results = simulate(model, init_parameters, timespan, velocity, control, None,goal=goals)
if not settles(results['t'], results['delta'], goals[1]):
return 0
################################continue here start =
# find the max
lowbd = start
upbd = start + 30
max_var = (lowbd + upbd) / 2
while (abs(upbd) - abs(lowbd)) > 1e-2:
init_parameters = max_var, init_pkg['delta'], init_pkg['d_phi'], init_pkg['d_delta']
results = simulate(model, init_parameters, timespan, velocity, control, None)
if settles(results['t'], results['phi'], 0):
lowbd = max_var
else:
upbd = max_var - 1
max_var = (lowbd + upbd) / 2
# find the min
upbd = start
lowbd = start - 30
min_var = (lowbd + upbd) / 2
while (abs(lowbd) - abs(upbd)) > 1e-2:
init_parameters = min_var, init_pkg['delta'], init_pkg['d_phi'], init_pkg['d_delta']
results = simulate(model, init_parameters, timespan, velocity, control, None)
if settles(results['t'], results['phi'], 0):
upbd = min_var
else:
lowbd = min_var
min_var = (lowbd + upbd) / 2
return max_var - min_var
def main():
params = parameters.Parameters()
params.read(sys.argv[1:])
sim = False
for task in params.task:
if task == "app":
dash_ui.launcher.launch_app(params)
elif task == "help":
if (len(sys.argv) > 2):
params.help(sys.argv[2])
else:
params.help()
elif task == "track":
tracking.track(params)
elif task == "simulate":
simulation.simulate(params)
sim = True
elif task == "postprocess":
postprocessing.postprocess(params, simulated=sim)
elif task == "view":
visualisation.render(params)
elif task == "compare":
trajectories.compare_trajectories(params)
else:
sys.exit(f"ERROR: Task {task} is not yet implemented. Aborting...")
def main():
""" -------------initialbetingelser for simulasjonen -------------------"""
#antall sekunder vi går mellom hvert steg
deltat = args.deltat
#feilmargin for vinkelen til planeten
err = .2 #antall grader
#random seed for random generatoren
seed(42)
#planeten/månen vi ønsker å observere rundetiden til
planet = ""
#systemet vi skal animere
system = solar_system(planet)
#planeten vi setter i sentrum av solsystemet
centre = ""
#vil vi se når planeten går rundt sentrumet i sin abolsutte bane,
#eller relativt til et annet legeme (sentrumet til planetens bane)?
relative_orbit = False
""" -------------initialbetingelser for grafikken ----------------------"""
#skalar slik at ting får plass i turtle-grafikkfeltet
scalar = 100 #antall turtle-enheter per astronomisk enhet
#antall steg vi venter mellom å oppdatere konsollinfo og linjer bak planetene
step = 100
#kjører simulasjonen
simulate(planet, centre, system, relative_orbit,
deltat, err, scalar, step)
def simulation_age_model(n, b_kids, g_kids, p_kids, b_normal, g_normal, p_normal, b_risk, g_risk, p_risk):
LG = setup_LG(n)
AM = AgeModel(b_kids, g_kids, p_kids, b_normal, g_normal, p_normal,
b_risk, g_risk, p_risk)
c_observer = CountObserver(kolor_palette.keys())
AM.init_states(LG, 5)
simulate(LG, AM, set(), 50, [c_observer])
return c_observer.data
def simulation_max_class(n, class_size, degree, p):
if degree is None and p is None:
LG, CH = setup_CH(n, classsize=class_size)
else:
LG, CH = setup_CH(n, classsize=class_size, degree=degree, p=p)
CH.init_states(LG, 5)
c_observer = CountObserver(color_palette.keys())
simulate(LG, CH, set(), 50, [c_observer])
return c_observer.data
def simulate_flows(K, flows, conf_file):
import simulation
simulation.simulate([
'--test', 'clos',
'--duration', '240',
'--delay', '100us',
'--json', conf_file,
str(K)
])
def simulation_max_quarantine_rates(n, q1, q2, q3):
LG = setup_LG(n)
CH = CoronaQuarantineModel(q1, q2, q3)
# Observer
c_observer = CountObserver(qolor_palette.keys())
observers = [c_observer]
# Simulation
CH.init_states(LG, 5)
simulate(LG, CH, set(), 50, observers)
return c_observer.data
def simulation_age_max_class(n, class_size, degree, p):
if degree is None and p is None:
LG = setup_LG(n, classsize=class_size)
else:
LG = setup_LG(n, classsize=class_size, degree=degree, p=p)
AM = AgeModel(B_KIDS, G_KIDS, P_KIDS, B_NORMAL, G_NORMAL, P_NORMAL,
B_NORMAL, G_NORMAL, P_NORMAL)
AM.init_states(LG, 5)
c_observer = CountObserver(kolor_palette.keys())
simulate(LG, AM, set(), 50, [c_observer])
return c_observer.data
def ohl(capital, star_param, cdata, typ):
max_dp = star_param['MAX']
start = star_param['START']
thr = star_param['THR']
var = star_param['VAR']
sl = star_param['SL']
t1 = star_param['T1']
t2 = star_param['T2']
st_id = star_param['ID']
scr = star_param['SC']
sims = {}
scrips = {}
data = {}
c.pr(
"I", "Initialiazing Strategy OHL Max DP -> " + str(max_dp) +
" Staring Data Point -> " + str(start), 0)
#Fetch Scrips
if scr == "ALL":
scrips = c.load_scrips()
else:
scrips[scr] = 1
#Fetch Data
for scrip in scrips:
if scr != "ALL":
if len(cdata):
data = cdata
else:
data = c.fetch_scrip_data(scrip, start, 0)
else:
data = c.fetch_scrip_data(scrip, start, 0)
spl_data = c.split_data(data, 36000)
for ctr in spl_data:
rddata = collections.OrderedDict(sorted(spl_data[ctr].items()))
iddata = c.intrafy(rddata)
sim_key, sim_data = ohl_process(iddata, thr, var, scrip, capital,
max_dp, sl, t1, t2, st_id)
if sim_key:
sims[sim_key + "_" + scrip] = sim_data
#Call Simulations
if len(sims):
rans = randomize(spl_data, sims, start, "09:31:00", "15:10:00", "OHL",
capital, sl, t1, t2, st_id)
c.pr("I", str(len(sims)) + " Actual Simulations Will Be Performed", 1)
c.pr("I", str(len(rans)) + " Random Simulations Will Be Performed", 1)
if typ == "B":
for key in sims:
sim.simulate(sims[key])
for key in rans:
sim.simulate(rans[key])
else:
sim.init_sim(sims, rans, st_id)
return
def simulation_max_time(n, t):
LG, CH = setup_CH(n)
# Interventions
layernames_to_p = {
"Households": 1, "Schools": 0, "Workplaces": 0.01,
"R_Workplaces": 0, "Social": 0, "parties": 0.00, "basic": 0.1}
um_intervention1 = UpdateMultipleLayerIntervention(layernames_to_p, t)
# Observer
c_observer = CountObserver(color_palette.keys())
observers = [c_observer]
# Simulation
CH.init_states(LG, 5)
simulate(LG, CH, {um_intervention1}, 50, observers)
return c_observer.data
def run_simulation(conf):
agent_1 = a.make_agent(pid.P1, conf)
agent_2 = a.make_agent(pid.P2, conf)
total_games = args.g
for i in range(total_games):
simulate(agent_1, agent_2)
prefix = conf.get_prefix()
p.plot_simulation_results(agent_1, agent_2, prefix)
p.plot_scores(agent_1, agent_2, prefix)
conf.log()
print('Done')
def simulate(self, ventilator):
simulate(ventilator)
self.simulateVentilatorOneButton.grid_remove()
self.simulateVentilatorTwoButton.grid_remove()
self.simulateVentilatorTreeButton.grid_remove()
self.showSimulateOptionsButton.grid(row=0, column=1)
self.splitLabel1.grid(row=1, column=1)
self.showGraphButton.grid(row=2, column=1)
self.casesSummaryButton.grid(row=3, column=1)
self.costsSummaryButton.grid(row=4, column=1)
def main():
parser = argparse.ArgumentParser(
description=
'Calculate and render probabilities of matchups for the show "Are You The One?".'
)
parser.add_argument(
'season',
type=str,
help='the name of a season available in the "seasons" folder, like "s1"'
)
parser.add_argument('--profile',
dest='profile',
action='store_true',
help='if provided, profiles the code')
args = parser.parse_args()
print(f'Reading season {args.season}')
season_data = seasons.read_season(args.season)
print(f'Preparing season')
season = seasons.convert_season(season_data)
print(f'Simulating season')
with timer.start(args.profile) as t:
output = simulation.simulate(season)
print(f'Simulation completed in {t.elapsed} seconds')
print(f'Plotting season')
fig = plot.create_plot(season, output)
fig.show()
def study_delay():
delay_means_ms = np.arange(0, 30e-3, 1e-3)
final_errors = []
xs = []
for delay_mean_ms in delay_means_ms:
delay_mean = delay_mean_ms
delay_std = delay_mean / 10
print("Delay: ", delay_mean, delay_std)
errors = []
for i in range(10):
result = simulate(
n=N,
connect_closest=CONNECT_CLOSEST,
delay_mean=delay_mean_ms,
delay_sigma=delay_std,
offset_sigma=OFFSET_SIGMA,
skew_sigma=SKEW_SIGMA,
simulation_length=60 * SIMULATION_MINUTES,
)
# analyze.plot_single_run(result, f"../img/delay_mean{delay_mean_ms}.pdf")
errors.append(result[-1].mean_error())
final_errors.append(min(errors))
xs.append(float(delay_mean))
analyze.plot_error(final_errors, xs, "../img/varying_delay.pdf")
make_table(xs, final_errors)
def one_step_estimation(self, params):
"""
Takes as input the data moments. Starts with a guess
for the parameters, calls the simulation.py class to
simulate the resulting series from the policy, calls the
compute_moments function to compute the moments of the
simulated dataset, and then runs GMM.
"""
#alpha, beta, sigma = params[0], params[1], params[2]
alpha, sigma = params[0], params[1]
simulation = simulate(sigma, alpha, self.data)
simulated_data = simulation.df
actual_moments = self.data_moments
simulated_moments = self.compute_moments(simulated_data)
diff = simulated_moments - actual_moments
d = np.size(diff)
print(diff)
weight = np.array([0.5, 0.5, 0.5, 0.5]) # np.array([0.1,0.1,0.8,0.5])
weight_matrix = np.eye(d) #np.diag(weight)
score = diff.T @ weight_matrix @ diff
return score
def run_simulation():
sht = xw.Book.caller().sheets[0]
# User Inputs
num_simulations = sht.range('E3').options(numbers=int).value
time_horizon = sht.range('E4').value
num_timesteps = sht.range('E5').options(numbers=int).value
dt = time_horizon / num_timesteps # Length of time period
vol = sht.range('E7').value
mu = np.log(1 + sht.range('E6').value) # Drift
starting_price = sht.range('E8').value
perc_selection = [5, 50, 95]
# Excel: clear output, write out initial values of percentiles/sample path and set chart source and x-axis values
sht.range('O2').expand().clear_contents()
sht.range('P2').value = [
starting_price, starting_price, starting_price, starting_price,
perc_selection
]
sht.charts['Chart 5'].set_source_data(
sht.range((1, 15), (num_timesteps + 2, 19)))
sht.range('O2').value = np.round(
np.linspace(0, time_horizon, num_timesteps + 1).reshape(-1, 1), 2)
percentiles, sample_path = simulate(num_timesteps, num_simulations,
starting_price, mu, vol, dt,
perc_selection)
sht.range('P2').value = percentiles
sht.range('S2').value = sample_path
def runVerification(self, instance):
# Run simulation
update = simulate()
if conf.DEBUG:
print "Update from verification: \n", update
#self.textView.text = update
self.updateLabels(update) # Update lebels on GUI
##Plot graphs
# Try to remove plots
try:
self.graph.remove_plot(self.plotPassed) # Remove passed plot
self.graph.remove_plot(self.plotFailed) # Remove failed plot
self.graphArts.remove_plot(
self.plotPassedArts) # Remove passed plot
self.graphArts.remove_plot(
self.plotFailedArts) # Remove failed plot
self.graphSocial.remove_plot(
self.plotPassedSocial) # Remove passed plot
self.graphSocial.remove_plot(
self.plotFailedSocial) # Remove failed plot
self.graphScience.remove_plot(
self.plotPassedScience) # Remove passed plot
self.graphScience.remove_plot(
self.plotFailedScience) # Remove failed plot
except Exception, e:
pass
def run(game):
data = pd.io.parsers.read_csv(in_dir + game)
players = list(set(data[data['tick'] == 1440]['pid'].dropna()))
n_players = len(players)
background_dir = bg_dir + game.split('_')[-2] + '/'
positions = []
for p in players:
sub = data[(data['tick'] == 0) & (data['pid'] == p)]
positions += [np.array(sub[['x_pos', 'y_pos']])[0]]
out_f = open(out_dir + game, 'w')
out_f.write(
'pid,tick,active,x_pos,y_pos,velocity,angle,bg_val,total_points\n')
world = simulation.simulate(
lambda x: SocialHeuristic(x, watch_others=social_model),
background_dir,
n_players,
par_settings=[0] * len(players),
init_pos=positions,
out_file=out_f,
pids=players)
out_f.close()
def run(game):
sub = df[df['game'] == game]
background_dir = bg_dir + game.split('_')[-2] + '/'
n_players = len(sub)
pars = list(sub['par'])
positions = np.array(sub[['x_pos', 'y_pos']])
pids = list(sub['pid'])
out_f = open(out_dir + game, 'w')
out_f.write(
'pid,tick,active,x_pos,y_pos,velocity,angle,bg_val,total_points\n')
world = simulation.simulate(
lambda x: RationalModel(x, watch_others=social_model),
background_dir,
n_players,
par_settings=pars,
init_pos=positions,
out_file=out_f,
pids=pids)
out_f.close()
def coordinates(year, month, day):
connection = sqlite3.connect("coordinate.db")
crsr = connection.cursor()
planets = ["Sun", "Mercury", "Venus", "Earth", "Moon", "Mars", "Jupiter", "Saturn", "Uranus", "Neptune", "Pluto"]
date = datetime.date(year, month, day).isoformat()
crsr.execute("SELECT * FROM coordinate WHERE date = ?", (date,))
test = crsr.fetchall()
if len(test) == 0:
T = planentpos.calc_date(year, month, day, 12, 0, 0)
x, y, z = simulation.simulate(T)
for i in range(len(planets)):
crsr.execute("INSERT INTO coordinate VALUES(?, ?, ?, ?, ?)", (date, planets[i], x[i], y[i], z[i]))
xcoords, ycoords, zcoords = [], [], []
for i in range(len(planets)):
crsr.execute("SELECT x_coordinate FROM coordinate WHERE date = ? and planet = ?", (date, planets[i]))
x_result = crsr.fetchone()
xcoords.append(x_result[0])
crsr.execute("SELECT y_coordinate FROM coordinate WHERE date = ? and planet = ?", (date, planets[i]))
y_result = crsr.fetchone()
ycoords.append(y_result[0])
crsr.execute("SELECT z_coordinate FROM coordinate WHERE date = ? and planet = ?", (date, planets[i]))
z_result = crsr.fetchone()
zcoords.append(z_result[0])
connection.commit()
connection.close()
return xcoords, ycoords, zcoords
def __run_basic_example():
import simulation
while True:
rs = simulation.create_random_example()
try:
r = simulation.simulate(rs,
method=simulation.Euler,
step_size=0.005)
break
except FloatingPointError:
continue
print(rs._b1)
print(r.ys[:3])
print(create_metadata(''))
single_animation(r, rs)
mtd = [simulation.Euler, simulation.DOPRI5, simulation.ExplicitMidpoint]
mms = simulation.simulate_multiple_methods(rs,
mtd,
duration=20,
step_size=0.01)
multi_animation(mms, rs)
exes = simulation.create_perturbations(5, rs, amount=1e-2)
ps = simulation.simulate_multiple_examples(exes, simulation.RK4, 30, 0.005)
multi_animation(ps, rs)
def scenario3():
np.random.seed(7)
# Simple SIR model.
sampler = Sampler()
n_days = 365 * 1
population_size = 500_000
I_initial = 500
copenhagen = Region('Copenhagen',
population_size,
sampler,
I_initial,
cyclical=2.5)
country = Country([copenhagen])
np.random.seed(7)
result = simulate(country, n_days=n_days)
Plotter.plot_SIR(result)
plt.legend()
plt.xlabel('Days')
plt.tight_layout()
plt.savefig(os.path.join(plot_path, '3_SEIR_periodic.png'), dpi=300)
plt.show()
np.random.seed(7)
result = repeat_simulate(country, n_repeats=n_repeats, n_days=n_days)
Plotter.plot_intervals(result['I_crit'].copy(), plot_median=False)
plt.plot(result['I_crit'][0], '--k', label='Example path', lw=0.5)
plt.xlabel('Days')
plt.ylabel('# Hospitalized')
plt.hlines(copenhagen.population_size * 0.0005, *plt.xlim())
plt.legend()
plt.tight_layout()
plt.savefig(os.path.join(plot_path, '3_SEIR_periodic_hospitalized.png'),
dpi=300)
plt.show()
sampler = Sampler()
n_days = 365 * 4
population_size = 500_000
I_initial = 500
copenhagen = Region('Copenhagen',
population_size,
sampler,
I_initial,
cyclical=2.5)
country = Country([copenhagen])
np.random.seed(7)
result = repeat_simulate(country, n_repeats=n_repeats, n_days=n_days)
Plotter.plot_intervals(result['I_crit'].copy(), plot_median=False)
plt.plot(result['I_crit'][0], '--k', label='Example path', lw=0.5)
plt.xlabel('Days')
plt.ylabel('# Hospitalized')
plt.hlines(copenhagen.population_size * 0.0005, *plt.xlim())
plt.legend()
plt.tight_layout()
plt.savefig(os.path.join(plot_path,
'3_SEIR_periodic_hospitalized_long.png'),
dpi=300)
plt.show()
def main(debug: Optional[bool] = False):
if not debug:
C = float(input("C (нФ) = ")) * 10 ** -9
L = float(input("L (мГн) = ")) * 10 ** -3
Rm = float(input("Rm (Ом) = "))
R0 = float(input("R0 (Ом) = "))
simulation_time = float(input("Simulation time: "))
interval = float(input("Data interval: "))
else:
C = 50 * 10 ** -9
L = 10 * 10 ** -3
Rm = 10
R0 = 1
simulation_time = 0.007
interval = 0.000_000_5
circuit = model.OscillatoryCircuit(C, L, Rm, R0)
data = simulation.simulate(circuit, simulation_time, interval)
print("T (theor.) = {:.7f}".format(circuit.period))
print("T (exp.) = {:.7f}".format(analysis.experimental_period(data)))
print("Lambda (theor.) = {:.5f}".format(circuit.lambda_coefficient))
print("Lambda (exp.) = {:.5f}".format(analysis.experimental_lambda(data)))
print("Q-factor = {:.5f}".format(circuit.q_factor))
if not path.exists('results'):
mkdir('results')
plot(1, data.time, data.capacitor_charge, 'Capacitor charge', 'q (Кл)', 'results/charge.png')
plot(2, data.time, data.capacitor_voltage, 'Capacitor voltage', 'U (V)', 'results/voltage.png')
plot(3, data.time, data.capacitor_current, 'Capacitor current', 'I (A)', 'results/current.png')
if not debug:
pyplot.show()
def simulate_season(numGames):
numSuccessfulPredictions = 0
with open('2017gamelogs.txt', 'r') as infile, open('2017simulations.txt',
'w') as outfile:
outfile.write(
"index,awayTeam,winAway,runAway,homeTeam,winHome,runHome," +
"predictedWinner,actualWinner,numSuccessfulPredictions\n")
for index, line in enumerate(infile, start=1):
gameInfo = [x.strip('\"') for x in line.split(',')]
# store (retrosheet player id, player name) tuples
batterInfoListAway = []
batterInfoListHome = []
for i in range(106, 133, 3):
batterName = get_fangraphs_name(gameInfo[i])
batterInfoListAway.append((gameInfo[i - 1], batterName))
for i in range(133, 159, 3):
batterName = get_fangraphs_name(gameInfo[i])
batterInfoListHome.append((gameInfo[i - 1], batterName))
pitcherInfoAway = (gameInfo[101],
get_fangraphs_name(gameInfo[102]))
pitcherInfoHome = (gameInfo[103],
get_fangraphs_name(gameInfo[104]))
# store batter, pitcher and league objects
batterListAway = []
batterListHome = []
for batterInfoAway, batterInfoHome in zip(batterInfoListAway,
batterInfoListHome):
batterListAway.append(
get_correct_batter_object(batterInfoAway))
batterListHome.append(
get_correct_batter_object(batterInfoHome))
pitcherAway = get_correct_pitcher_object(pitcherInfoAway)
pitcherHome = get_correct_pitcher_object(pitcherInfoHome)
league = League.objects.get(year=2017)
winAway, winHome, runAway, runHome = simulation.simulate(
numGames, batterListAway, pitcherAway, batterListHome,
pitcherHome, league)
predictedWinner = 'Home'
if winAway > winHome:
predictedWinner = 'Away'
actualWinner = 'Home'
# if the away team won in the actual game
if int(gameInfo[9]) > int(gameInfo[10]):
actualWinner = 'Away'
if predictedWinner == actualWinner:
numSuccessfulPredictions += 1
print(index)
# index, winAway, winHome, predictedWinner, actualWinner, numSuccessfulPredictions
outfile.write(
str(index) + ',' + gameInfo[3] + ',' + str(winAway) + ',' +
str(runAway) + ',' + gameInfo[6] + ',' + str(winHome) + ',' +
str(runHome) + ',' + predictedWinner + ',' + actualWinner +
',' + str(numSuccessfulPredictions) + '\n')
def run_simulation():
data = request.get_json(force=True)
# User Inputs
num_simulations = int(data['num_simulations'])
time_horizon = float(data['time_horizon'])
num_timesteps = int(data['num_timesteps'])
dt = time_horizon / num_timesteps # Length of time period
vol = float(data['vol']) / 100
mu = np.log(1 + float(data['exp_simple_ret']) / 100) # Drift
starting_price = float(data['starting_price'])
perc_selection = [5, 50, 95]
percentiles, sample_path = simulate(num_timesteps, num_simulations,
starting_price, mu, vol, dt,
perc_selection)
x = np.round(np.linspace(0, time_horizon, num_timesteps + 1), 2).tolist()
data = [{
'x':
x,
'y':
percentiles[:, i].tolist(),
'name':
'{0}th Percentile'.format(perc_selection[i])
if perc_selection[i] != 50 else 'Median'
} for i in range(percentiles.shape[1])]
data.append({
'x': x,
'y': sample_path.squeeze().tolist(),
'name': 'Sample Path'
})
return json.dumps(data)
def runCautious(filename, num_exp):
first = True
for hero_mode in [2, 4, 5]:
for p_d in range(5, 20 + 1, 5):
p_d /= 100
if hero_mode == 5:
real_mode = 2
p_r_a = pra[str(p_d)]
inputs, data = s.simulate(real_mode,
num_exp,
probDetect=p_d,
probRandAttack=p_r_a)
inputs["hero_mode"] = 5
else:
inputs, data = s.simulate(hero_mode, num_exp, probDetect=p_d)
dataToCSV(filename, inputs, data, first)
first = False
def get(self):
years = int(self.get_argument('years', 10))
iterations = int(self.get_argument('iterations', 2))
rows = simulation.simulate(years, iterations)
forecast_id = rows[0][0]
self.render('templates/simulation.html',
years=years,
iterations=iterations,
rows=rows,
forecast_id=forecast_id)
def update(self):
"""
Update the simulation if something was changed in the input, according to the data
from the UI.
"""
if self.update_simulation:
time_dir_right_step = -self.time_step if self.time < 0.0 else self.time_step
self.orbits = simulation.simulate(
self.grav_const_slider.val,
map(simulation.from_obj, self.objs),
self.time,
time_dir_right_step
)
self.update_simulation = False
def runVerification(self, instance): # Run simulation update = simulate() if conf.DEBUG: print "Update from verification: \n", update #self.textView.text = update self.updateLabels(update) # Update lebels on GUI ##Plot graphs # Try to remove plots try: self.graph.remove_plot(self.plotPassed) # Remove passed plot self.graph.remove_plot(self.plotFailed) # Remove failed plot self.graphArts.remove_plot(self.plotPassedArts) # Remove passed plot self.graphArts.remove_plot(self.plotFailedArts) # Remove failed plot self.graphSocial.remove_plot(self.plotPassedSocial) # Remove passed plot self.graphSocial.remove_plot(self.plotFailedSocial) # Remove failed plot self.graphScience.remove_plot(self.plotPassedScience) # Remove passed plot self.graphScience.remove_plot(self.plotFailedScience) # Remove failed plot except Exception, e: pass
def run_simulation():
sht = xw.Book.caller().sheets[0]
# User Inputs
num_simulations = sht.range('E3').options(numbers=int).value
time_horizon = sht.range('E4').value
num_timesteps = sht.range('E5').options(numbers=int).value
dt = time_horizon / num_timesteps # Length of time period
vol = sht.range('E7').value
mu = np.log(1 + sht.range('E6').value) # Drift
starting_price = sht.range('E8').value
perc_selection = [5, 50, 95]
# Excel: clear output, write out initial values of percentiles/sample path and set chart source and x-axis values
sht.range('O2').expand().clear_contents()
sht.range('P2').value = [starting_price, starting_price, starting_price, starting_price, perc_selection]
sht.charts['Chart 5'].set_source_data(sht.range((1, 15), (num_timesteps + 2, 19)))
sht.range('O2').value = np.round(np.linspace(0, time_horizon, num_timesteps + 1).reshape(-1, 1), 2)
percentiles, sample_path = simulate(num_timesteps, num_simulations, starting_price, mu, vol, dt, perc_selection)
sht.range('P2').value = percentiles
sht.range('S2').value = sample_path
'''
Documentation, License etc.
@package pltsim
'''
import argparse
from simulation import simulate
def parseArgs():
argParser = argparse.ArgumentParser(description = "Simpulate TCP and AQM algorithms on arbitary topology.")
argParser.add_argument("-c", "--capacity", type = int, default = 100, help = "capacity of all links in packets per second")
argParser.add_argument("-t", "--tcp", required = True, choices = ["Reno"], help = "tcp algorithm name")
argParser.add_argument("-a", "--aqm", required = True, choices = ["RED", "CoDel"], help = "aqm algorithm name")
argParser.add_argument("-r", "--routes", required = True, type = argparse.FileType('r'),
help = "file with flow routes\neach line has a chain of routers indexes, which represents a flow")
argParser.add_argument("-o", "--output", required = True, type = argparse.FileType('w'),
help = "output file, where NS3 stores its log after execution")
return argParser.parse_args()
def parseRoutes(routesFile):
routes = []
for line in routesFile:
routes.append([int(routerIndex) for routerIndex in line.strip().split(' ')])
return routes
if __name__ == "__main__":
args = parseArgs()
args.routes = parseRoutes(args.routes)
simulate(args.routes, args.tcp, args.aqm, args.capacity, args.output)
import simulation
if __name__ == '__main__':
# simulation.simulate(int(input("observation_period (s): \n")),
# int(input("max_driveway_length (cars): \n")),
# int(input("average_arrival_rate (s): \n")),
# int(input("average_service_rate (s): \n")),
# int(input("average_meal_price ($): \n")),
# float(input("per_meal_cost ($): \n")))
simulation.simulate()
# W_E_LGN_E_L6 = exponential_connect(0.2/100000., n_e_lgn, n_e_l6)
# W_E_LGN_I_L6 = exponential_connect(0.2/1000000., n_e_lgn, n_i_l6)
#Backup
W_E_LGN_E_L6 = exponential_connect(2/100000., n_e_lgn, n_e_l6)
W_E_LGN_I_L6 = exponential_connect(2/1000000., n_e_lgn, n_i_l6)
W_E_L6_E_LGN = exponential_connect(0.4375/100000., n_e_l6, n_e_lgn) # 4 mv / 10 (Wang & Hirsch 2010) 300 pA (Granseth & Lindstrom 2002) # TODO: isn't it Wnag & Hirsch 2011?
# TODO: E_L6 is NOT connected to I_LGN. Find reference
# Backup
W_E_L4_E_L6 = exponential_connect(4/100000., n_e_l4, n_e_l6)
# PSP = 1.4 mV Haeusler and Maass 2006 (heuristic from E L2/3 to E L5)
# W_E_L4_E_L6 = exponential_connect(0.5/100000., n_e_l4, n_e_l6)
# W_E_L6_TRN = exponential_connect(0.4/1000000., n_e_l6, n_trn)
#Backup
W_E_L6_TRN = exponential_connect(4/1000000., n_e_l6, n_trn)
W_E_L4_TRN = W_E_L6_TRN # only if net include V1 L4 but not V1 L6
simulate(nruns, total_time, with_V1_L4, with_V1_L6, with_TRN, input, con_input_lgn,
n_e_lgn, n_i_lgn, n_e_l6, n_i_l6, n_e_l4, n_i_l4, n_trn,
delay_distbtn_E_L6_LGN, delay_E_L4_E_LGN, delay_E_LGN_I_L4, delay_E_LGN_E_L4, delay_E_LGN_E_L6,
delay_E_LGN_TRN, delay_E_L4_TRN, delay_distbtn_E_L6_TRN, delay_E_LGN_I_LGN, delay_I_LGN_E_LGN, delay_E_LGN_I_L6,
lgn_params, l4_params, l6_params, W_TRN_TRN, W_E_LGN_TRN, W_TRN_E_LGN, W_E_L6_TRN, W_E_L4_E_L6,
W_E_LGN_E_L4, W_E_L4_E_LGN, W_E_L6_E_LGN, W_E_LGN_E_L6, W_E_LGN_I_L6, W_E_LGN_I_L4, W_E_L4_TRN,
connect_E_LGN_E_L4, connect_E_LGN_I_L4, connect_E_L4_E_LGN, connect_E_LGN_I_L6, connect_E_LGN_E_L6, connect_E_L6_E_LGN, connect_E_L4_TRN, connect_E_L6_TRN,
connect_E_LGN_TRN, connect_TRN_E_LGN, connect_E_L4_E_L6)
plt.show()
import os
import fake
import simulation
import display
from groups.sim_group_move import generate_fake
option = raw_input('0. Real data \n1. Generated data\n')
if option == '0':
fake.process('generated.dat')
simulation.simulate('generated.dat')
display.display('generated-display.dat')
elif option == '1':
generate_fake(os.path.join(os.getcwd(), 'data','fake-virus.dat'))
simulation.simulate('fake-virus.dat')
display.display('fake-virus-display.dat')
else:
print 'Invalid option'
from pprint import pprint
from simulation import simulate
import json
import sys
materialParameters = [1.0, 5.0, 10.0, 5.0]
resultsFileName = "results.json"
if len(sys.argv) >= 5:
materialParameters = [float(sys.argv[1]), float(sys.argv[2]), float(sys.argv[3]), float(sys.argv[4])]
if len(sys.argv) == 6:
resultsFileName = sys.argv[5]
resultsFibre = simulate(0.0, materialParameters)
# by re-orienting the fibre direction in the unit cube we can simulate a cross fibre extension
resultsCross = simulate(90.0, materialParameters)
results = {}
results["materialParameters"] = materialParameters
results["fibre"] = resultsFibre
results["cross"] = resultsCross
pprint(resultsFibre)
pprint(resultsCross)
pprint(results)
with open(resultsFileName, 'w') as rjson:
json.dump(results, rjson)
[weight, weight, 0, weight], # E-E I-I E-I
[weight, 0, weight, weight], # E-E I-E E-I
[0, weight, weight, weight], # I-I I-E E-I
[weight, weight, weight, weight] # E-E I-I I-E E-I
]
time_sim_start = str(datetime.now())
fname_peaks = os.path.join(OUTPUT_DIR, "sweep_" + time_sim_start + ".txt")
open(fname_peaks, 'a').close()
for conn in connectivity:
lgn_params = {
'w_e_lgn_e_lgn': exponential_connect(conn[0], n_e_lgn, n_e_lgn, False), # TODO: reference for this -> LGN doesn't have intrinsic connections
'w_i_lgn_i_lgn': exponential_connect(conn[1], n_i_lgn, n_i_lgn, False), # TODO: reference for this -> LGN doesn't have intrinsic connections
'w_i_lgn_e_lgn': exponential_connect(conn[2], n_i_lgn, n_e_lgn), # PSP 5 mV (Wang & Hirsch 2010)
'w_e_lgn_i_lgn': exponential_connect(conn[3], n_e_lgn, n_i_lgn),
'delay_e_i': 1,
'delay_i_e': 1
}
fname_lfps_prefix = os.path.join(OUTPUT_DIR, time_sim_start + "_" + str(conn) + "_sim-")
print conn
simulate(conn, OUTPUT_DIR, fname_peaks, fname_lfps_prefix, dt, nruns, total_time, temperature, with_V1_L4, with_V1_L6, with_TRN, input, con_input_lgn,
n_e_lgn, n_i_lgn, n_e_l6, n_i_l6, n_e_l4, n_i_l4, n_trn,
threshold, delay, delay_distbtn_E_L6_LGN, delay_E_L4_E_LGN, delay_E_LGN_I_L4, delay_E_LGN_E_L4, delay_E_LGN_E_L6,
delay_E_LGN_TRN, delay_E_L4_TRN, delay_distbtn_E_L6_TRN, delay_E_LGN_I_L6,
lgn_params, l4_params, l6_params, trn_params, W_E_LGN_TRN, W_TRN_E_LGN, W_E_L6_TRN, W_E_L4_E_L6,
W_E_LGN_E_L4, W_E_L4_E_LGN, W_E_L6_E_LGN, W_E_LGN_E_L6, W_E_LGN_I_L6, W_E_LGN_I_L4, W_E_L4_TRN,
connect_E_LGN_E_L4, connect_E_LGN_I_L4, connect_E_L4_E_LGN, connect_E_LGN_I_L6, connect_E_LGN_E_L6, connect_E_L6_E_LGN, connect_E_L4_TRN, connect_E_L6_TRN,
connect_E_LGN_TRN, connect_TRN_E_LGN, connect_E_L4_E_L6)
import viz import simulation results = simulation.simulate() viz.phase_3D(results,'population','food','wood') viz.phase_2D(results,'food','wood')
def optimize(u_method, obs, **kwargs):
''' optimization function
coords - spot where the function is evaluated
f - result of the evaluation
'''
Point = namedtuple("point", ["x", "y"])
y = kwargs['y']
sim_n = kwargs['sim_n']
output = dict()
cpustart = timeit.default_timer()
# some decision procedure that results in the x y result
if u_method is 'golden':
# deterministic/non evaluating parts
simtime = 0
alpha = kwargs['alpha']
epsilon = kwargs['epsilon']
a = kwargs['a']
b = kwargs['b']
output['a'] = a
output['b'] = b
c = b + (a - b)/golden
ob_c = Point(x=c, y=y)
d = a + (b - a)/golden
ob_d = Point(x=d, y=y)
pick = None
# sample and confidence loop
# 1. check if either f(c) or f(d) exists. if not, create them.
# 2 samples are needed to establish a CI
# if they do exist, sample only from the larger CI
explored = True
if ob_c not in obs:
explored = False
csim = simulate(c, y, sim_n=sim_n)
simtime += csim['simtime']
obs[ob_c] = [csim['f']]
csim = simulate(c, y, sim_n=sim_n)
simtime += csim['simtime']
obs[ob_c].append(csim['f'])
if ob_d not in obs:
explored = False
dsim = simulate(d, y, sim_n=sim_n)
simtime += dsim['simtime']
obs[ob_d] = [dsim['f']]
dsim = simulate(d, y, sim_n=sim_n)
simtime += dsim['simtime']
obs[ob_d].append(dsim['f'])
# Compute confidence intervals (prerequisite for future steps)
ci_c = stats.norm.interval(
alpha, loc=np.mean(obs[ob_c]),
scale=np.std(obs[ob_c], ddof=1)/np.sqrt(len(obs[ob_c])))
ci_d = stats.norm.interval(
alpha, loc=np.mean(obs[ob_d]),
scale=np.std(obs[ob_d], ddof=1)/np.sqrt(len(obs[ob_d])))
if explored:
if (ci_c[1] - ci_c[0]) > (ci_d[1] - ci_d[0]):
csim = simulate(c, y, sim_n=sim_n)
simtime += csim['simtime']
obs[ob_c].append(csim['f'])
ci_c = stats.norm.interval(
alpha, loc=np.mean(obs[ob_c]),
scale=np.std(obs[ob_c], ddof=1)/np.sqrt(len(obs[ob_c])))
else:
dsim = simulate(d, y, sim_n=sim_n)
simtime += dsim['simtime']
obs[ob_d].append(dsim['f'])
ci_d = stats.norm.interval(
alpha, loc=np.mean(obs[ob_d]),
scale=np.std(obs[ob_d], ddof=1)/np.sqrt(len(obs[ob_d])))
# 2. while confidence intervals are not disjoint, keep shrinking em
while (ci_c[1] >= ci_d[0]) and (ci_d[1] >= ci_c[0]):
# exit condition: both CIs are so small we are indifferent
if max(ci_c[1] - ci_c[0], ci_d[1] - ci_d[0]) < epsilon:
break
if (ci_c[1] - ci_c[0]) > (ci_d[1] - ci_d[0]):
csim = simulate(c, y, sim_n=sim_n)
simtime += csim['simtime']
obs[ob_c].append(csim['f'])
ci_c = stats.norm.interval(
alpha, loc=np.mean(obs[ob_c]),
scale=np.std(obs[ob_c], ddof=1)/np.sqrt(len(obs[ob_c])))
else:
dsim = simulate(d, y, sim_n=sim_n)
simtime += dsim['simtime']
obs[ob_d].append(dsim['f'])
ci_d = stats.norm.interval(
alpha, loc=np.mean(obs[ob_d]),
scale=np.std(obs[ob_d], ddof=1)/np.sqrt(len(obs[ob_d])))
# 3. now that CIs are disjoint, take the lower one
# case: confidence interval at c is fully below interval at d
if ci_c[1] < ci_d[0]:
pick = 'c'
# case: confidence interval at d is fully below interval at c
if ci_d[1] < ci_c[0]:
pick = 'd'
if pick is 'c':
output['b'] = d
else:
output['a'] = c
output['f_c'] = np.mean(obs[ob_c])
output['f_d'] = np.mean(obs[ob_d])
# end loop
output['simtime'] = simtime
# ***
if u_method is 'gradient':
simout = simgradient(
kwargs['x'], kwargs['y'], sim_grad_n=kwargs['sim_grad_n'])
output['gradient'] = simout['gradient']
output['x'] = kwargs['x'] - kwargs['stepsize'] * output['gradient']
output['simtime'] = simout['simtime']
simout = simulate(
output['x'], kwargs['y'], sim_n=sim_n)
output['f'] = simout['f']
output['simtime'] += simout['simtime']
# ***
# end decision procedure
output['opttime'] = timeit.default_timer() - cpustart - output['simtime']
return output
