def prepare_simulation(data, run_dir):
"""Create and install files, update parameters, and generate command.
Copies files into the simulation directory (``run_dir``)
Updates the parameters in ``data`` and save.
Generate the pkcli command.
Args:
data (dict): report and model parameters
run_dir (py.path.local): dir simulation will be run in
Returns:
list, py.path: pkcli command, simulation directory
"""
import sirepo.sim_data
sim_type = data.simulationType
template = sirepo.template.import_module(data)
s = sirepo.sim_data.get_class(sim_type)
s.lib_files_to_run_dir(data, run_dir)
update_rsmanifest(data)
write_json(run_dir.join(template_common.INPUT_BASE_NAME), data)
#TODO(robnagler) encapsulate in template
is_p = s.is_parallel(data)
template.write_parameters(
data,
run_dir=run_dir,
is_parallel=is_p,
)
cmd = [
pkinspect.root_package(template),
pkinspect.module_basename(template),
'run-background' if is_p else 'run',
str(run_dir),
]
return cmd, run_dir
def prepare_simulation(data, tmp_dir=None):
"""Create and install files, update parameters, and generate command.
Copies files into the simulation directory (``run_dir``), or (if
specified) a ``tmp_dir``.
Updates the parameters in ``data`` and save.
Generate the pkcli command to pass to task runner.
Args:
data (dict): report and model parameters
tmp_dir (py.path.local):
Returns:
list, py.path: pkcli command, simulation directory
"""
if tmp_dir is None:
# This is the legacy (pre-runner-daemon) code path
run_dir = simulation_run_dir(data, remove_dir=True)
#TODO(robnagler) create a lock_dir -- what node/pid/thread to use?
# probably can only do with celery.
pkio.mkdir_parent(run_dir)
out_dir = run_dir
# Only done on the legacy path, because the runner daemon owns the
# status file.
write_status('pending', out_dir)
else:
# This is the runner-daemon code path -- tmp_dir is always given, as a
# new temporary directory we have to create.
run_dir = simulation_run_dir(data)
pkio.mkdir_parent(tmp_dir)
out_dir = tmp_dir
sim_type = data['simulationType']
sid = parse_sid(data)
template = sirepo.template.import_module(data)
template_common.copy_lib_files(data, None, out_dir)
write_json(out_dir.join(template_common.INPUT_BASE_NAME), data)
#TODO(robnagler) encapsulate in template
is_p = is_parallel(data)
template.write_parameters(
data,
run_dir=out_dir,
is_parallel=is_p,
)
cmd = [
pkinspect.root_package(template),
pkinspect.module_basename(template),
'run-background' if is_p else 'run',
str(run_dir),
]
return cmd, run_dir
def prepare_simulation(data, run_dir=None):
"""Create and install files, update parameters, and generate command.
Copies files into the simulation directory (``run_dir``)
Updates the parameters in ``data`` and save.
Generate the pkcli command to pass to task runner.
Args:
data (dict): report and model parameters
run_dir (py.path.local): defaults to `simulation_run_dir`
Returns:
list, py.path: pkcli command, simulation directory
"""
import sirepo.sim_data
if run_dir is None:
# This is the legacy (pre-runner-daemon) code path
run_dir = simulation_run_dir(data, remove_dir=True)
#TODO(robnagler) create a lock_dir -- what node/pid/thread to use?
# probably can only do with celery.
pkio.mkdir_parent(run_dir)
write_status('pending', run_dir)
sim_type = data.simulationType
template = sirepo.template.import_module(data)
s = sirepo.sim_data.get_class(sim_type)
s.lib_files_to_run_dir(data, run_dir)
update_rsmanifest(data)
write_json(run_dir.join(template_common.INPUT_BASE_NAME), data)
#TODO(robnagler) encapsulate in template
is_p = s.is_parallel(data)
template.write_parameters(
data,
run_dir=run_dir,
is_parallel=is_p,
)
cmd = [
pkinspect.root_package(template),
pkinspect.module_basename(template),
'run-background' if is_p else 'run',
str(run_dir),
]
return cmd, run_dir
def prepare_simulation(data):
"""Create and install files, update parameters, and generate command.
Copies files into the simulation directory (``run_dir``).
Updates the parameters in ``data`` and save.
Generate the pkcli command to pass to task runner.
Args:
data (dict): report and model parameters
Returns:
list, py.path: pkcli command, simulation directory
"""
run_dir = simulation_run_dir(data, remove_dir=True)
#TODO(robnagler) create a lock_dir -- what node/pid/thread to use?
# probably can only do with celery.
pkio.mkdir_parent(run_dir)
write_status('pending', run_dir)
sim_type = data['simulationType']
sid = parse_sid(data)
template = sirepo.template.import_module(data)
template_common.copy_lib_files(data, None, run_dir)
write_json(run_dir.join(template_common.INPUT_BASE_NAME), data)
#TODO(robnagler) encapsulate in template
is_p = is_parallel(data)
template.write_parameters(
data,
run_dir=run_dir,
is_parallel=is_p,
)
cmd = [
pkinspect.root_package(template),
pkinspect.module_basename(template),
'run-background' if is_p else 'run',
str(run_dir),
]
return cmd, run_dir
def prepare_simulation(data):
"""Create and install files, update parameters, and generate command.
Copies files into the simulation directory (``run_dir``).
Updates the parameters in ``data`` and save.
Generate the pkcli command to pass to task runner.
Args:
data (dict): report and model parameters
Returns:
list, py.path: pkcli command, simulation directory
"""
run_dir = simulation_run_dir(data, remove_dir=True)
#TODO(robnagler) create a lock_dir -- what node/pid/thread to use?
# probably can only do with celery.
pkio.mkdir_parent(run_dir)
write_status('pending', run_dir)
sim_type = data['simulationType']
sid = parse_sid(data)
template = sirepo.template.import_module(data)
template_common.copy_lib_files(data, None, run_dir)
write_json(run_dir.join(template_common.INPUT_BASE_NAME), data)
#TODO(robnagler) encapsulate in template
is_p = is_parallel(data)
template.write_parameters(
data,
run_dir=run_dir,
is_parallel=is_p,
)
cmd = [
pkinspect.root_package(template),
pkinspect.module_basename(template),
'run-background' if is_p else 'run',
str(run_dir),
]
return cmd, run_dir
