def test_pipeline_init_tuple():
# Pipeline accepts steps as tuple
X = np.array([[1, 2]])
pipe = Pipeline((('transf', Transf()), ('clf', FitParamT())))
pipe.fit(X, y=None)
pipe.score(X)
pipe.set_params(transf=None)
pipe.fit(X, y=None)
pipe.score(X)
def test_set_pipeline_steps():
transf1 = Transf()
transf2 = Transf()
pipeline = Pipeline([('mock', transf1)])
assert pipeline.named_steps['mock'] is transf1
# Directly setting attr
pipeline.steps = [('mock2', transf2)]
assert 'mock' not in pipeline.named_steps
assert pipeline.named_steps['mock2'] is transf2
assert_equal([('mock2', transf2)], pipeline.steps)
# Using set_params
pipeline.set_params(steps=[('mock', transf1)])
assert_equal([('mock', transf1)], pipeline.steps)
# Using set_params to replace single step
pipeline.set_params(mock=transf2)
assert_equal([('mock', transf2)], pipeline.steps)
# With invalid data
pipeline.set_params(steps=[('junk', ())])
assert_raises(TypeError, pipeline.fit, [[1]], [1])
assert_raises(TypeError, pipeline.fit_transform, [[1]], [1])
def test_set_params_nested_pipeline():
estimator = Pipeline([('a', Pipeline([('b', DummyRegressor())]))])
estimator.set_params(a__b__alpha=0.001, a__b=Lasso())
estimator.set_params(a__steps=[('b', LogisticRegression())], a__b__C=5)
def test_pipeline_init():
# Test the various init parameters of the pipeline.
assert_raises(TypeError, Pipeline)
# Check that we can't instantiate pipelines with objects without fit
# method
assert_raises_regex(
TypeError, 'Last step of Pipeline should implement fit. '
'.*NoFit.*', Pipeline, [('clf', NoFit())])
# Smoke test with only an estimator
clf = NoTrans()
pipe = Pipeline([('svc', clf)])
assert_equal(
pipe.get_params(deep=True),
dict(svc__a=None, svc__b=None, svc=clf, **pipe.get_params(deep=False)))
# Check that params are set
pipe.set_params(svc__a=0.1)
assert_equal(clf.a, 0.1)
assert_equal(clf.b, None)
# Smoke test the repr:
repr(pipe)
# Test with two objects
clf = SVC()
filter1 = SelectKBest(f_classif)
pipe = Pipeline([('anova', filter1), ('svc', clf)])
# Check that we can't instantiate with non-transformers on the way
# Note that NoTrans implements fit, but not transform
assert_raises_regex(
TypeError, 'All intermediate steps should be transformers'
'.*\\bNoTrans\\b.*', Pipeline, [('t', NoTrans()), ('svc', clf)])
# Check that params are set
pipe.set_params(svc__C=0.1)
assert_equal(clf.C, 0.1)
# Smoke test the repr:
repr(pipe)
# Check that params are not set when naming them wrong
assert_raises(ValueError, pipe.set_params, anova__C=0.1)
# Test clone
pipe2 = assert_no_warnings(clone, pipe)
assert_false(pipe.named_steps['svc'] is pipe2.named_steps['svc'])
# Check that apart from estimators, the parameters are the same
params = pipe.get_params(deep=True)
params2 = pipe2.get_params(deep=True)
for x in pipe.get_params(deep=False):
params.pop(x)
for x in pipe2.get_params(deep=False):
params2.pop(x)
# Remove estimators that where copied
params.pop('svc')
params.pop('anova')
params2.pop('svc')
params2.pop('anova')
assert_equal(params, params2)