def __init__(self,
recording,
sorting,
channel_ids,
unit_ids,
peak,
log,
ncols,
background,
cmap,
label_color='r',
figure=None,
ax=None,
axes=None,
**template_kwargs):
BaseMultiWidget.__init__(self, figure, ax, axes)
self._recording = recording
self._sorting = sorting
self._channel_ids = channel_ids
self._unit_ids = unit_ids
self._peak = peak
self._log = log
self._ncols = ncols
self._bg = background
self._cmap = cmap
self._label_color = label_color
self._template_kwargs = template_kwargs
self.name = 'UnitTemplateMaps'
assert 'location' in self._recording.get_shared_channel_property_names(), "Activity map requires 'location'" \
"property"
def __init__(self, *, sorting, sampling_frequency, unit_ids=None, bins=10, window=1, figure=None, ax=None):
BaseMultiWidget.__init__(self, figure, ax)
self._sorting = sorting
self._unit_ids = unit_ids
self._sampling_frequency = sampling_frequency
self._bins = bins
self._maxw = window
self.name = 'ISIDistribution'
def __init__(self, multi_sorting_comparison, plot_type='pie', cmap='YlOrRd', fs=9,
figure=None, axes=None, ax=None, show_legend=True):
BaseMultiWidget.__init__(self, figure, ax, axes)
self._msc = multi_sorting_comparison
self._type = plot_type
self._cmap = cmap
self._fs = fs
self._show_legend = show_legend
self.name = 'MultiCompAgreementBySorterWidget'
def __init__(self,
recording,
sorting,
max_spikes_per_unit=100,
figure=None,
ax=None):
BaseMultiWidget.__init__(self, figure, ax)
self._sorting = sorting
self._recording = recording
self._max_spikes_per_unit = max_spikes_per_unit
def __init__(self,
*,
sorting,
sampling_frequency,
unit_ids=None,
binsize=2,
window=50,
figure=None,
ax=None):
BaseMultiWidget.__init__(self, figure, ax)
self._sorting = sorting
self._unit_ids = unit_ids
self._sampling_frequency = sampling_frequency
self._binsize = binsize
self._window = window
self.name = 'CrossCorrelograms'
def __init__(self,
*,
recording,
sorting,
channel_ids=None,
unit_ids=None,
max_spikes_per_unit=50,
max_channels=16,
ms_before=1.,
ms_after=2.,
channel_locs=True,
plot_templates=True,
radius=None,
show_all_channels=True,
figure=None,
ax=None,
axes=None,
color='k',
lw=2,
axis_equal=False,
plot_channels=False,
set_title=True):
BaseMultiWidget.__init__(self, figure, ax, axes)
self._recording = recording
self._sorting = sorting
self._channel_ids = channel_ids
self._max_channels = max_channels
self._unit_ids = unit_ids
self._ms_before = ms_before
self._ms_after = ms_after
self._max_spikes_per_unit = max_spikes_per_unit
self._ch_locs = channel_locs
self.name = 'UnitWaveforms'
self._plot_waveforms = True
self._plot_templates = plot_templates
self._radius = radius
self._show_all_channels = show_all_channels
self._color = color
self._lw = lw
self._axis_equal = axis_equal
self._plot_channels = plot_channels
self._set_title = set_title
def __init__(self,
*,
recording,
sorting,
unit_ids=None,
nproj=4,
colormap=None,
figure=None,
ax=None,
axes=None,
**pca_kwargs):
BaseMultiWidget.__init__(self, figure, ax, axes)
self._sorting = sorting
self._recording = recording
self._unit_ids = unit_ids
self._pca_scores = None
self._nproj = nproj
self._colormap = colormap
self._pca_kwargs = pca_kwargs
self.name = 'Feature'
def __init__(self,
*,
recording,
sorting,
channel_ids=None,
unit_ids=None,
max_channels=None,
channel_locs=True,
plot_waveforms=True,
plot_templates=True,
radius=None,
show_all_channels=True,
figure=None,
ax=None,
axes=None,
color='k',
lw=2,
axis_equal=False,
plot_channels=False,
set_title=True,
**kwargs):
BaseMultiWidget.__init__(self, figure, ax, axes)
self._recording = recording
self._sorting = sorting
self._channel_ids = channel_ids
if max_channels is None:
max_channels = recording.get_num_channels()
self._max_channels = max_channels
self._unit_ids = unit_ids
self._ch_locs = channel_locs
self.name = 'UnitWaveforms'
self._plot_waveforms = plot_waveforms
self._plot_templates = plot_templates
self._radius = radius
self._show_all_channels = show_all_channels
self._color = color
self._lw = lw
self._axis_equal = axis_equal
self._plot_channels = plot_channels
self._set_title = set_title
self._kwargs = kwargs
def __init__(self,
*,
recording,
sorting,
channel_ids=None,
unit_ids=None,
max_spikes_per_unit=50,
ms_before=1.,
ms_after=2.,
channel_locs=False,
figure=None,
ax=None):
BaseMultiWidget.__init__(self, figure, ax)
self._recording = recording
self._sorting = sorting
self._channel_ids = channel_ids
self._unit_ids = unit_ids
self._ms_before = ms_before
self._ms_after = ms_after
self._max_spikes_per_unit = max_spikes_per_unit
self._ch_locs = channel_locs
self.name = 'UnitWaveforms'
def __init__(self,
*,
recording,
sorting,
unit_ids=None,
max_spikes_per_unit=100,
nproj=4,
colormap=None,
figure=None,
ax=None,
save_as_features=False,
save_waveforms_as_features=False):
BaseMultiWidget.__init__(self, figure, ax)
self._sorting = sorting
self._recording = recording
self._unit_ids = unit_ids
self._nproj = nproj
self._max_spikes_per_unit = max_spikes_per_unit
self._pca_scores = None
self._colormap = colormap
self._save_as_features = save_as_features
self._save_waveforms_as_features = save_waveforms_as_features
self.name = 'Feature'