def test_parse_site_underscore(self): site_str = "chr1_gl0000asd_18263_25973_-" site_dic = sr._parse_site(site_str) self.assertEquals("chr1_gl0000asd", site_dic["chrom"]) self.assertEquals(18263, site_dic["start"]) self.assertEquals(25973, site_dic["stop"]) self.assertEquals("-", site_dic["strand"])
def test_parse_site(self): site_str = "chr1_18253_25983_+" site_dic = sr._parse_site(site_str) self.assertEquals("chr1", site_dic["chrom"]) self.assertEquals(18253, site_dic["start"]) self.assertEquals(25983, site_dic["stop"]) self.assertEquals("+", site_dic["strand"])