def test_transform(self):
read_data = ReadData()
loaded_data = read_data.read_data_and_set_variable_settings("../Dataset/00-91-Drugs-All-In-One-File.csv", "../Dataset/VariableSetting.csv")
data_manager = DataManager(normalizer=None)
data_manager.set_data(loaded_data)
data_manager.split_data_into_train_valid_test_sets()
model = svm.SVR()
velocity = Velocity()
velocity_matrix = velocity.create_first_velocity()
# define the first population
# validation of a row generating random row for
population = Population(velocity_matrix=velocity_matrix)
population.create_first_population()
debpso = DEBPSO(population.population_matrix[0])
debpso.fit(data_manager.inputs[SplitTypes.Train], data_manager.targets[SplitTypes.Train])
data_manager.transformed_input[SplitTypes.Train] = debpso.transform(data_manager.inputs[SplitTypes.Train])
print("Population 0 row sum ", population.population_matrix[0].sum())
print("Selected feature descriptors",debpso.sel_descriptors_for_curr_population)
print("Transformed array", data_manager.transformed_input[SplitTypes.Train])
def test_transform(self):
read_data = ReadData()
loaded_data = read_data.read_data_and_set_variable_settings(
"../Dataset/00-91-Drugs-All-In-One-File.csv",
"../Dataset/VariableSetting.csv")
data_manager = DataManager(normalizer=None)
data_manager.set_data(loaded_data)
data_manager.split_data_into_train_valid_test_sets()
model = svm.SVR()
velocity = Velocity()
velocity_matrix = velocity.create_first_velocity()
# define the first population
# validation of a row generating random row for
population = Population(velocity_matrix=velocity_matrix)
population.create_first_population()
debpso = DEBPSO(population.population_matrix[0])
debpso.fit(data_manager.inputs[SplitTypes.Train],
data_manager.targets[SplitTypes.Train])
data_manager.transformed_input[SplitTypes.Train] = debpso.transform(
data_manager.inputs[SplitTypes.Train])
print("Population 0 row sum ", population.population_matrix[0].sum())
print("Selected feature descriptors",
debpso.sel_descriptors_for_curr_population)
print("Transformed array",
data_manager.transformed_input[SplitTypes.Train])
