def main():
searchSpace = tp.TaskPic(search_space_filename)
ssx, ssy = searchSpace.size()
for t in target_filenames:
target = tp.Target(t, threshhold)
print(t + ' initialized. now searching...\n')
tx, ty = target.size()
most_sim = {
'sp': [0.0, (0, 0)], # format: [most_sim, (pixel)]
'mm': [0.0, (0, 0)],
'alt': [0.0, (0, 0)]
}
subSpace = np.empty((tx, ty))
#spArr = np.empty((ssx-tx+1,ssy-ty+1))
#altArr = np.empty((ssx-tx+1,ssy-ty+1))
nIterations = (ssx - tx + 1) * (ssy - ty + 1)
counter = 0
for sx in range(ssx - tx + 1):
for sy in range(ssy - ty + 1):
subSpace = np.array(searchSpace.pix[sx:sx + tx, sy:sy + ty])
sp = sim.sumProd(target.pix, subSpace)
mm = sim.maxMin(target.pix, subSpace)
a = sim.alt(target.pix, subSpace)
#spArr[sx,sy] = sp
#altArr[sx,sy] = a
if sp > most_sim['sp'][0]:
most_sim['sp'] = [sp, (sx, sy)]
if mm > most_sim['mm'][0]:
most_sim['mm'] = [mm, (sx, sy)]
if a > most_sim['alt'][0]:
most_sim['alt'] = [a, (sx, sy)]
counter += 1
if counter % 500 == 0:
print(
str(round(100 * (float(counter) / nIterations), 1)) +
r'% done')
target.sp = most_sim['sp'][1]
target.mm = most_sim['mm'][1]
target.alt = most_sim['alt'][1]
#debug(spArr,'sp'+target.fname.split('.')[0])
#debug(altArr,'alt'+target.fname.split('.')[0])
print(t + ' similarities:\n')
print('sp: ' + str(most_sim['sp']))
print('mm: ' + str(most_sim['mm']))
print('alt: ' + str(most_sim['alt']) + '\n')
print('Drawing boxes and saving...')
target.box(searchSpace)
def main():
#choice, easel = tuple([tp.TaskPic(os.path.join(pic_path, pic)) for pic in os.listdir(pic_path)])
choice, easel = tuple([
tp.TaskPic(os.path.join(pic_path, pic))
for pic in [choice_pic, easel_pic]
])
hist_choice, bins = np.histogram(choice.pix, bins=40, range=(0.1, 1.0))
hist_easel, _ = np.histogram(easel.pix, bins=40, range=(0.1, 1.0))
#print hist_choice
#print hist_easel
width = 0.7 * (bins[1] - bins[0])
center = (bins[:-1] + bins[1:]) / 2
plt.bar(center, softmax(hist_choice), align='center', width=width)
plt.title('Box Choice Distribution')
#plt.show()
plt.draw()
fig = plt.gcf()
fig.savefig('hist_choice_box.jpg')
plt.clf()
plt.bar(center, softmax(hist_easel), align='center', width=width)
plt.title('Box Easel Distribution')
#plt.show()
plt.draw()
fig = plt.gcf()
fig.savefig('hist_easel_box.jpg')
plt.clf()
def main():
print('Initializing task elements...')
choices = [
tp.TaskPic(os.getcwd() + '\\%s\\%s' % (choices_dir, c))
for c in os.listdir(choices_dir)
]
targets = [
tp.TaskPic(os.getcwd() + '\\%s\\%s' % (targets_dir, t))
for t in os.listdir(targets_dir)
]
print('...DONE!\n')
for t in targets:
# TODO identify slices
print(t.fname + ':\n')
print('Identifying densest sqaure...')
rot_ret, r_start = densest_square(
t) # returns retina for rotated target
print('...DONE!\n')
print('Starting density search...')
locations = sim_density_search(choices, rot_ret, priority_queue_size)
#print locations
print('...DONE!\n')
print('Starting rotational search...')
result = search(choices, rot_ret,
locations) # format: [sim, location, wedge_index]
print('...DONE!\n')
local_t_fname = t.fname.split('\\')[-1] if '\\' in t.fname else t.fname
local_c_fname = choices[result[1][0]].fname.split(
'\\')[-1] if '\\' in choices[result[1][0]].fname else choices[
result[1][0]].fname
print('%s densest at pixel %s with density %f:' %
(local_t_fname, str(r_start), rot_ret.density))
print('\t-Location: choice %d (AKA %s) at pixel %s' %
(result[1][0], local_c_fname, str((result[1][1:]))))
print(
'\t-Rotation: wedge %d out of %d, which corresponds to the target being rotated %.2f degrees anti-clockwise'
% (result[2], template.nWedges,
round(float(result[2]) / template.nWedges * 360, 2)))
print('\t-Similarity: %f' % result[0])
def main():
original = tp.TaskPic(original_filename)
original.blur()
#original.save()
original.pix2retina()
#original.pix = p2r.main(original.pix)
rotated = tp.TaskPic(rotated_filename)
rotated.blur()
#rotated.save()
rotated.pix2retina()
#rotated.pix = p2r.main(rotated.pix)
print('pictures initialized. Now beginning search...\n')
results = search(original, rotated)
for key in results.keys():
print('%s:\t%f at %s' %
(key, round(results[key][0], 3), str(results[key][1])))
def main():
searchSpace = tp.TaskPic(search_space_filename)
ssx, ssy = searchSpace.size()
ssSmall = searchSpace.resize(resize_factor)
sssx, sssy = ssSmall.size()
for t in target_filenames:
target = tp.Target(t, threshhold)
tx, ty = target.size()
targetSmall = target.resize(resize_factor)
tsx, tsy = targetSmall.size()
print(t + ' initialized. Now beginning initial search...\n')
search(ssSmall, targetSmall, [(0, 0, sssx - tsx + 1, sssy - tsy + 1)],
priority_queue_size)
#refined_search_locations = addLocations(targetSmall.most_sim['alt'],(ssx,ssy),(tx,ty))
refined_search_locations = []
for key in targetSmall.most_sim.keys():
temp = [
refined_search_locations,
addLocations(targetSmall.most_sim[key], (ssx, ssy), (tx, ty))
]
refined_search_locations = set().union(*temp)
print('Initial search completed. Now beginning refined search...\n')
results = search(searchSpace, target, refined_search_locations, 1)
#debug(spArr,'sp'+target.fname.split('.')[0])
#debug(altArr,'alt'+target.fname.split('.')[0])
print(t + ' similarities:\n')
for key in results.keys():
print('%s:\t%f at %s' %
(key, round(results[key][0][0], 3), str(results[key][0][1])))
#print results
print('Drawing boxes and saving...')
target.box(searchSpace)
def solve_problem(prob):
start_t = time.time()
cwd = os.path.join(problems_dir, prob)
print('Initializing choices...')
# for later problems (09 thru 15) where there are easel choices
choices = [
tp.TaskPic(os.path.join(cwd, choices_dir, c))
for c in os.listdir(os.path.join(cwd, choices_dir))
]
# for earlier problems (03 thru 08) where there are no easel choices
#choices = [tp.TaskPic(os.path.join(cwd,'easel.jpg'))]
#targets = [tp.TaskPic(os.getcwd() + '\\%s\\%s' % (targets_dir,t)) for t in os.listdir(targets_dir)]
print('...DONE!\n')
target_path = os.path.join(cwd, targets_dir)
outfile_path = os.path.join(os.getcwd(), results_dir, prob)
for target in os.listdir(target_path):
# TODO identify slices automatically
target_outfile_path = os.path.join(outfile_path, 'choice_%s' % target)
target_infile_path = os.path.join(target_path, target)
for c_slice in os.listdir(target_infile_path):
slice_name = c_slice.split('.')[0]
slice_path = os.path.join(target_outfile_path, slice_name)
if not os.path.exists(slice_path):
os.makedirs(slice_path)
with open(os.path.join(slice_path, 'console_readout.txt'),
'w') as f:
print('Target: %s\nSlice: %s\n' % (target, slice_name))
slicePic = tp.TaskPic(os.path.join(target_infile_path,
c_slice))
pix = slicePic.pix
s = None
sx, sy = slicePic.size()
max_dim = max(sx, sy)
start_x = int((max_dim - sx)) / 2
start_y = int((max_dim - sy)) / 2
# creates a square matrix around pix, padding with zeros
# adds 1 to make sure getTransparent() will reach all possible pixels
padded = np.zeros((max_dim + 1, max_dim + 1), dtype=pix.dtype)
padded[start_x:start_x + sx, start_y:start_y + sy] = pix
slicePic.pix = np.copy(padded)
slicePic.update()
pix = slicePic.pix
# resizes image for faster density_delta search
slicePic_small = slicePic.resize(resize_factor)
padded_choices = []
padded_choices_small = []
# pads each choice with zeros just in case slice and/or subslice is on edge
for choice in choices:
cx, cy = choice.size()
start = s.size / 2
padded_pix = np.zeros((cx + s.size, cy + s.size),
dtype=choice.pix.dtype)
padded_pix[start:start + cx, start:start + cy] = choice.pix
new_choice = choice.copy()
new_choice.pix = padded_pix
new_choice.update()
padded_choices.append(new_choice)
# resizes image for faster density_delta search
new_choice_small = new_choice.resize(resize_factor)
padded_choices.append(new_choice)
padded_choices_small.append(new_choice_small)
print(
'Initializing....creating templates and retina objects...may take some time....'
)
# # empirically this has been found to be a good tradeoff of speed vs.
# # efficiency as the retina gets bigger
# hn_refined = int(round(max_dim / 25.0))
# s_small = r.Slice(slicePic_small,prob,target,useTransparentPix=useTransparentPix,hn=hn_coarse)
# # s_small.ret.visualize().show()
# s = r.Slice(slicePic,prob,target,useTransparentPix=useTransparentPix,hn=hn_refined)
# # s.ret.visualize().show()
# print('\n....DONE!!!\n')
# empirically this has been found to be a good tradeoff of speed vs.
# efficiency as the retina gets bigger
# hn = int(round(max_dim+1 / 25.0))
hn = int(round((max_dim + 1) / 50.0))
print('Creating slice template...')
template = r.Template(max_dim + 1, hn=hn)
print('....DONE!!!\n')
# slice is too small for default subsize
if subsize > min(pix.shape):
print('Using smaller subtemplate for this slice...')
s = r.HybridSlice(slicePic,
prob,
target,
useTransparentPix=useTransparentPix,
template=template,
subsize=min(pix.shape) - 1,
sub_hn=sub_hn)
else:
s = r.HybridSlice(slicePic,
prob,
target,
useTransparentPix=useTransparentPix,
template=template,
subtemplate=subtemplate)
subtemp = s.subtemplate
f.write('Using subretina with following parameters:\n')
f.write('\t-size: %d x %d\n' % (subtemp.size, subtemp.size))
f.write('\t-number of rings: %d\n' % subtemp.nRings)
f.write('\t-number of wedges: %d\n' % subtemp.nWedges)
f.write('\t-blindspot_radius: %f\n\n' % subtemp.bs_radius)
temp = s.template
f.write('Using retina with following parameters:\n')
f.write('\t-size: %d x %d\n' % (temp.size, temp.size))
f.write('\t-number of rings: %d\n' % temp.nRings)
f.write('\t-number of wedges: %d\n' % temp.nWedges)
f.write('\t-blindspot_radius: %f\n\n' % temp.bs_radius)
print('Starting density search...')
locations = sim_density_search(padded_choices, s.subslice.ret,
priority_queue_size, slice_path)
'''
locations = [[np.array([141, 56])],
[np.array([60, 97])],
[np.array([116, 188])],
[np.array([60, 81])]]
#[np.array([129,100])]]
'''
#print locations
print('...DONE!\n')
print('Starting rotational search...')
s_flipped = s.flip()
primarySearch(padded_choices, s, s_flipped, locations)
print('...DONE!\n')
'''
for slice in [s, s_flipped]:
im = slice.taskpic.im
name = slice.taskpic.fname.split('\\')[-1]
boxes = []
box_index = 0
for start in [slice.primary.start,slice.secondary.start]:
end = start + np.array([s.size-1,s.size-1])
boxes.append(([tuple(start),tuple(end)],box_colors[box_index]))
box_index += 1
drawBoxes(im,boxes,slice_path,name)
'''
#sys.exit(1)
sliceIm = slicePic.im
boxes = []
box_index = 0
for start in [s.subslice.start]:
end = start + np.array([s.subsize - 1, s.subsize - 1])
boxes.append(([tuple(start),
tuple(end)], box_colors[box_index]))
box_index += 1
drawBoxes(sliceIm, boxes, slice_path, 'subslice.jpg')
sliceImFlipped = s_flipped.taskpic.im
boxes = []
box_index = 0
for start in [s_flipped.subslice.start]:
end = start + np.array([s.subsize - 1, s.subsize - 1])
boxes.append(([tuple(start),
tuple(end)], box_colors[box_index]))
box_index += 1
drawBoxes(sliceImFlipped, boxes, slice_path,
'subslice_flipped.jpg')
print('Writing results...')
f.write('subslice identified in %s:...\n\n' % slice_name)
f.write('\t-Location in target slice: ' +
str(s.subslice.start) + '\n')
f.write('\t-Variance (within retinal rings): ' +
str(s.subslice.ret.getVar()) + '\n')
#f.write('\t-Unrefined Density: ' + str(s.primary.ret.getUnrefinedDensity()) + '\n')
f.write('\t-Density: ' + str(s.subslice.ret.getDensity()) +
'\n')
f.write('\nResults:...\n\n')
writeResults(padded_choices, s, s_flipped, f, slice_path)
print('...DONE!\n')
end_t = time.time()
print('\nTime elapsed: %f' % (end_t - start_t))
def solve_problem(prob):
start_t = time.time()
cwd = os.path.join(problems_dir, prob)
print('Initializing choices...')
# for later problems (09 thru 15) where there are easel choices
choices = [
tp.TaskPic(os.path.join(cwd, choices_dir, c))
for c in os.listdir(os.path.join(cwd, choices_dir))
]
# for earlier problems (03 thru 08) where there are no easel choices
#choices = [tp.TaskPic(os.path.join(cwd,'easel.jpg'))]
#targets = [tp.TaskPic(os.getcwd() + '\\%s\\%s' % (targets_dir,t)) for t in os.listdir(targets_dir)]
print('...DONE!\n')
target_path = os.path.join(cwd, targets_dir)
outfile_path = os.path.join(os.getcwd(), results_dir, prob)
for target in os.listdir(target_path):
# TODO identify slices automatically
target_outfile_path = os.path.join(outfile_path, 'choice_%s' % target)
target_infile_path = os.path.join(target_path, target)
for c_slice in os.listdir(target_infile_path):
slice_name = c_slice.split('.')[0]
slice_path = os.path.join(target_outfile_path, slice_name)
if not os.path.exists(slice_path):
os.makedirs(slice_path)
with open(os.path.join(slice_path, 'console_readout.txt'),
'w') as f:
print('Target: %s\nSlice: %s\n' % (target, slice_name))
slicePic = tp.TaskPic(os.path.join(target_infile_path,
c_slice))
pix = slicePic.pix
s = None
sx, sy = slicePic.size()
max_dim = max(sx, sy)
start_x = int((max_dim - sx)) / 2
start_y = int((max_dim - sy)) / 2
# creates a square matrix around pix, padding with zeros
padded = np.zeros((max_dim, max_dim), dtype=pix.dtype)
padded[start_x:start_x + sx, start_y:start_y + sy] = pix
pix = padded
padded_choices = []
# pads each choice with zeros just in case slice is on edge
for choice in choices:
cx, cy = choice.size()
start = max_dim / 2
padded_pix = np.zeros((cx + max_dim, cy + max_dim),
dtype=choice.pix.dtype)
padded_pix[start:start + cx, start:start + cy] = choice.pix
new_choice = choice.copy()
new_choice.pix = padded_pix
new_choice.update()
padded_choices.append(new_choice)
print(
'Initializing....creating template and retina object...may take some time....'
)
# empirically this has been found to be a good tradeoff of speed vs.
# efficiency as the retina gets bigger
hn = int(round(max_dim / 25.0))
s = r.CompleteTargetSlice(pix, prob, target, hn=hn)
print('\n....DONE!!!\n')
temp = s.template
f.write('Using retina with following parameters:\n')
f.write('\t-size: %d x %d\n' % (temp.size, temp.size))
f.write('\t-number of rings: %d\n' % temp.nRings)
f.write('\t-number of wedges: %d\n' % temp.nWedges)
f.write('\t-blindspot_radius: %f\n\n' % temp.bs_radius)
print('Starting density search...')
locations = sim_density_search(padded_choices, s.ret,
priority_queue_size, slice_path)
#print locations
print('...DONE!\n')
print('Starting rotational search...')
primarySearch(padded_choices, s, locations)
print('...DONE!\n')
print('Writing results...')
f.write('Using slice %s:...\n' % slice_name)
f.write('\nResults:...\n\n')
writeResults(padded_choices, s, f, slice_path)
print('...DONE!\n')
end_t = time.time()
print('\nTime elapsed: %f' % (end_t - start_t))
def main():
start_t = time.time()
print('Initializing choices...')
choices = [
tp.TaskPic(os.getcwd() + '\\%s\\%s' % (choices_dir, c))
for c in os.listdir(choices_dir)
]
#targets = [tp.TaskPic(os.getcwd() + '\\%s\\%s' % (targets_dir,t)) for t in os.listdir(targets_dir)]
print('...DONE!\n')
target_path = os.getcwd() + '\\' + targets_dir
outfile_path = os.getcwd() + '\\' + results_dir + '\\'
for target in os.listdir(targets_dir):
# TODO identify slices automatically
target_outfile_path = outfile_path + target
if not os.path.exists(target_outfile_path):
os.makedirs(target_outfile_path)
with open(target_outfile_path + '\\console_readout.txt', 'w') as f:
print(target + ':\n')
path = target_path + '\\' + target
print('Initializing slices...')
slicePics = [
tp.TaskPic(path + '\\%s' % s) for s in os.listdir(path)
]
slices = [
r.TargetSlice(s.pix, target, size=search_size)
for s in slicePics
]
s = slices[
slice_index] #********** TODO this is arbitrary; should be traditionally densest slice
print('...DONE!\n')
print('Starting density search...')
locations = sim_density_search(choices, s.primary.ret,
priority_queue_size)
'''
locations = []
for i in xrange(len(choices)):
locs = []
for n in xrange(20):
locs.append((i,n))
locations.append(locs)
'''
#print locations
print('...DONE!\n')
print('Starting rotational search...')
primarySearch(choices, s, locations)
print('...DONE!\n')
sliceIm = slicePics[slice_index].im
boxes = []
box_index = 0
for start in [s.primary.start, s.secondary.start]:
end = start + np.array([s.size - 1, s.size - 1])
boxes.append(([tuple(start),
tuple(end)], box_colors[box_index]))
box_index += 1
drawBoxes(sliceIm, boxes,
os.getcwd() + '\\%s\\%s' % (results_dir, target),
'slice_%d_regions.jpg' % slice_index)
print('Writing results...')
f.write('Regions identified in target slice:...\n\n')
f.write('Primary region:\n')
f.write('\t-Location in target slice: ' + str(s.primary.start) +
'\n')
f.write('\t-Unrefined Density: ' +
str(s.primary.ret.getUnrefinedDensity()) + '\n')
f.write('\t-Density: ' + str(s.primary.ret.getDensity()) + '\n')
f.write('\nSecondary region:\n')
f.write('\t-Location in target slice: ' + str(s.secondary.start) +
'\n')
f.write('\t-Unrefined Density: ' +
str(s.secondary.ret.getUnrefinedDensity()) + '\n')
f.write('\t-Density: ' + str(s.secondary.ret.getDensity()) + '\n')
f.write('\nResults:...\n\n')
writeResults(choices, s, f)
print('...DONE!\n')
end_t = time.time()
print('\nTime elapsed: %f' % (end_t - start_t))
def solve_problem(prob):
start_t = time.time()
cwd = os.path.join(problems_dir, prob)
print('Initializing choices...')
# for later problems (09 thru 15) where there are easel choices
choices = [
tp.TaskPic(os.path.join(cwd, choices_dir, c))
for c in os.listdir(os.path.join(cwd, choices_dir))
]
# for earlier problems (03 thru 08) where there are no easel choices
#choices = [tp.TaskPic(os.path.join(cwd,'easel.jpg'))]
#targets = [tp.TaskPic(os.getcwd() + '\\%s\\%s' % (targets_dir,t)) for t in os.listdir(targets_dir)]
print('...DONE!\n')
target_path = os.path.join(cwd, targets_dir)
outfile_path = os.path.join(os.getcwd(), results_dir, prob)
for target in os.listdir(target_path):
# TODO identify slices automatically
target_outfile_path = os.path.join(outfile_path, 'choice_%s' % target)
target_infile_path = os.path.join(target_path, target)
for c_slice in os.listdir(target_infile_path):
slice_name = c_slice.split('.')[0]
slice_path = os.path.join(target_outfile_path, slice_name)
if not os.path.exists(slice_path):
os.makedirs(slice_path)
with open(os.path.join(slice_path, 'console_readout.txt'),
'w') as f:
print('Target: %s\nSlice: %s\n' % (target, slice_name))
slicePic = tp.TaskPic(os.path.join(target_infile_path,
c_slice))
pix = slicePic.pix
s = None
# slice is too small for default search_size
if search_size > min(pix.shape):
print('Using smaller template for this slice...')
s = r.Subslice(slicePic,
prob,
target,
useTransparentPix=useTransparentPix,
size=min(pix.shape) - 1,
hn=hn,
nRegions=3)
else:
s = r.Subslice(slicePic,
prob,
target,
useTransparentPix=useTransparentPix,
template=template,
nRegions=3)
temp = s.template
f.write('Using retina with following parameters:\n')
f.write('\t-size: %d x %d\n' % (temp.size, temp.size))
f.write('\t-number of rings: %d\n' % temp.nRings)
f.write('\t-number of wedges: %d\n' % temp.nWedges)
f.write('\t-blindspot_radius: %f\n\n' % temp.bs_radius)
padded_choices = []
# pads each choice with zeros just in case subslice is on edge
for choice in choices:
cx, cy = choice.size()
start = s.size / 2
padded_pix = np.zeros((cx + s.size, cy + s.size),
dtype=choice.pix.dtype)
padded_pix[start:start + cx, start:start + cy] = choice.pix
new_choice = choice.copy()
new_choice.pix = padded_pix
new_choice.update()
padded_choices.append(new_choice)
print('Starting density search...')
locations = sim_density_search(padded_choices, s.primary.ret,
priority_queue_size, slice_path)
'''
locations = [[np.array([83,15])],
[np.array([1,15])],
[np.array([117,126])],
[np.array([129,100])]]
#[np.array([129,100])]]
'''
#print locations
print('...DONE!\n')
print('Starting rotational search...')
s_flipped = s.flip()
# sys.exit(0)
primarySearch(padded_choices, s, s_flipped, locations)
print('...DONE!\n')
'''
for slice in [s, s_flipped]:
im = slice.taskpic.im
name = slice.taskpic.fname.split('\\')[-1]
boxes = []
box_index = 0
for start in [slice.primary.start,slice.secondary.start]:
end = start + np.array([s.size-1,s.size-1])
boxes.append(([tuple(start),tuple(end)],box_colors[box_index]))
box_index += 1
drawBoxes(im,boxes,slice_path,name)
'''
#sys.exit(1)
sliceIm = slicePic.im
boxes = []
box_index = 0
for start in [
s.primary.start, s.secondary.start, s.tertiary.start
]:
end = start + np.array([s.size - 1, s.size - 1])
boxes.append(([tuple(start),
tuple(end)], box_colors[box_index]))
box_index += 1
drawBoxes(sliceIm, boxes, slice_path, 'pst_regions.jpg')
sliceImFlipped = s_flipped.taskpic.im
boxes = []
box_index = 0
for start in [
s_flipped.primary.start, s_flipped.secondary.start,
s_flipped.tertiary.start
]:
end = start + np.array([s.size - 1, s.size - 1])
boxes.append(([tuple(start),
tuple(end)], box_colors[box_index]))
box_index += 1
drawBoxes(sliceIm, boxes, slice_path,
'pst_regions_flipped.jpg')
print('Writing results...')
f.write('Regions identified in %s:...\n\n' % slice_name)
for name, region in [('Primary', s.primary), \
('Secondary', s.secondary), \
('Tertiary', s.tertiary)]:
f.write('%s region:\n' % name)
f.write('\t-Location in target slice: ' +
str(region.start) + '\n')
f.write('\t-Variance (within retinal rings): ' +
str(region.ret.getVar()) + '\n')
#f.write('\t-Unrefined Density: ' + str(s.primary.ret.getUnrefinedDensity()) + '\n')
f.write('\t-Density: ' + str(region.ret.getDensity()) +
'\n')
f.write('\nResults:...\n\n')
writeResults(padded_choices, s, s_flipped, f, slice_path)
print('...DONE!\n')
end_t = time.time()
print('\nTime elapsed: %f' % (end_t - start_t))
def solve_problem(prob):
start_t = time.time()
cwd = os.path.join(problems_dir, prob)
print('Initializing choices...')
# for later problems (09 thru 15) where there are easel choices
#choices = [tp.TaskPic(os.path.join(cwd,choices_dir,c)) for c in os.listdir(os.path.join(cwd,choices_dir))]
# for earlier problems (03 thru 08) where there are no easel choices
choices = [tp.TaskPic(os.path.join(cwd,'easel.jpg'))]
#targets = [tp.TaskPic(os.getcwd() + '\\%s\\%s' % (targets_dir,t)) for t in os.listdir(targets_dir)]
print('...DONE!\n')
target_path = os.path.join(cwd, targets_dir)
outfile_path = os.path.join(os.getcwd(), results_dir, prob)
for target in os.listdir(target_path):
# TODO identify slices automatically
target_outfile_path = os.path.join(outfile_path, target)
if not os.path.exists(target_outfile_path):
os.makedirs(target_outfile_path)
with open(os.path.join(target_outfile_path,'console_readout.txt'), 'w') as f:
print(target + ':\n')
path = os.path.join(target_path, target)
print('Initializing slices...')
slicePics = [tp.TaskPic(os.path.join(path, s)) for s in os.listdir(path)]
slice_index = np.random.randint(0,len(slicePics)) #********** TODO this is arbitrary; could use all of them
pix = slicePics[slice_index].pix
s = None
print('\n\t....Slice %d chosen....\n' % slice_index)
# slice is too small for default search_size
if search_size > min(pix.shape):
print('Using smaller template for this slice...')
s = r.TargetSlice(pix,prob,target,size=min(pix.shape))
else:
s = r.TargetSlice(pix,prob,target,template=template)
print('...DONE!\n')
temp = s.template
f.write('Using retina with following parameters:\n')
f.write('\t-size: %d x %d\n' % (temp.size, temp.size))
f.write('\t-number of rings: %d\n' % temp.nRings)
f.write('\t-number of wedges: %d\n' % temp.nWedges)
f.write('\t-blindspot_radius: %f\n\n' % temp.bs_radius)
print('Starting density search...')
locations = sim_density_search(choices,s.primary.ret,priority_queue_size)
'''
locations = []
for i in range(len(choices)):
locs = []
for n in range(20):
locs.append((i,n))
locations.append(locs)
'''
#print locations
print('...DONE!\n')
print('Starting rotational search...')
primarySearch(choices,s,locations)
print('...DONE!\n')
sliceIm = slicePics[slice_index].im
boxes = []
box_index = 0
for start in [s.primary.start,s.secondary.start]:
end = start + np.array([s.size-1,s.size-1])
boxes.append(([tuple(start),tuple(end)],box_colors[box_index]))
box_index += 1
drawBoxes(sliceIm,boxes,target_outfile_path,'slice_%d_regions.jpg' % slice_index)
print('Writing results...')
f.write('Regions identified in target slice%d:...\n\n' % slice_index)
f.write('Primary region:\n')
f.write('\t-Location in target slice: ' + str(s.primary.start) + '\n')
f.write('\t-Variance (within retinal rings): ' + str(s.primary.ret.getVar()) + '\n')
#f.write('\t-Unrefined Density: ' + str(s.primary.ret.getUnrefinedDensity()) + '\n')
f.write('\t-Density: ' + str(s.primary.ret.getDensity()) + '\n')
f.write('\nSecondary region:\n')
f.write('\t-Location in target slice: ' + str(s.secondary.start) + '\n')
f.write('\t-Variance (within retinal rings): ' + str(s.secondary.ret.getVar()) + '\n')
#f.write('\t-Unrefined Density: ' + str(s.secondary.ret.getUnrefinedDensity()) + '\n')
f.write('\t-Density: ' + str(s.secondary.ret.getDensity()) + '\n')
f.write('\nResults:...\n\n')
writeResults(choices,s,f)
print('...DONE!\n')
end_t = time.time()
print('\nTime elapsed: %f' % (end_t - start_t))
