def testReadDmp02(self): data = taxonomy.read_dmp( infile=self.nodesfile, keys=taxonomy.nodes_keys, condition=None) firstline = data.next() expect = {'division_id': '8', 'parent_id': '1', 'embl_code': '', 'rank': 'no rank', 'tax_id': '1'} log.info('firstline: %s' % `firstline`) log.info('expect: %s' % `expect`) self.assertEqual(expect, firstline)
def testReadDmp01(self): data = taxonomy.read_dmp( infile=self.namesfile, keys=taxonomy.names_keys, condition=None) firstline = data.next() expect = {'class': 'synonym', 'unique': '', 'tax_name': 'all', 'tax_id': '1'} log.info('firstline: %s' % `firstline`) log.info('expect: %s' % `expect`) self.assertEqual(expect, firstline)