def testZeros(self):
self.assertAllEqual(
connected_components(
self.evaluate(tf.zeros((100, 20, 50), tf.bool))),
np.zeros((100, 20, 50)),
)
def testOnes(self):
self.assertAllEqual(
self.evaluate(connected_components(tf.ones((100, 20, 50),
tf.bool))),
np.tile(np.arange(100)[:, None, None] + 1, [1, 20, 50]),
)
def test_random_scipy():
np.random.seed(42)
images = np.random.randint(0, 2, size=(10, 100, 200)).astype(np.bool)
expected = connected_components_reference_implementation(images)
if expected is None:
return
np.testing.assert_equal(connected_components(images).numpy(), expected)
def testRandom_scipy(self):
np.random.seed(42)
images = np.random.randint(0, 2, size=(10, 100, 200)).astype(np.bool)
expected = connected_components_reference_implementation(images)
if expected is None:
return
self.assertAllEqual(self.evaluate(connected_components(images)),
expected)
def testDisconnected(self):
arr = tf.cast(
[[1, 0, 0, 1, 0, 0, 0, 0, 1], [0, 1, 0, 0, 0, 1, 0, 1, 0],
[1, 0, 1, 0, 0, 0, 1, 0, 0], [0, 0, 0, 0, 1, 0, 0, 0, 0],
[0, 0, 1, 0, 0, 0, 0, 0, 0]], tf.bool) # pylint: disable
expected = ([[1, 0, 0, 2, 0, 0, 0, 0, 3], [0, 4, 0, 0, 0, 5, 0, 6, 0],
[7, 0, 8, 0, 0, 0, 9, 0, 0], [0, 0, 0, 0, 10, 0, 0, 0, 0],
[0, 0, 11, 0, 0, 0, 0, 0, 0]]) # pylint: disable
self.assertAllEqual(self.evaluate(connected_components(arr)), expected)
def testMultipleImages(self):
images = [[[1, 1, 1, 1], [1, 0, 0, 1], [1, 0, 0, 1], [1, 1, 1, 1]],
[[1, 0, 0, 1], [0, 0, 0, 0], [0, 0, 0, 0], [1, 0, 0, 1]],
[[1, 1, 0, 1], [0, 1, 1, 0], [1, 0, 1, 0],
[0, 0, 1, 1]]] # pylint: disable
expected = [[[1, 1, 1, 1], [1, 0, 0, 1], [1, 0, 0, 1], [1, 1, 1, 1]],
[[2, 0, 0, 3], [0, 0, 0, 0], [0, 0, 0, 0], [4, 0, 0, 5]],
[[6, 6, 0, 7], [0, 6, 6, 0], [8, 0, 6, 0],
[0, 0, 6, 6]]] # pylint: disable
self.assertAllEqual(
self.evaluate(connected_components(tf.cast(images, tf.bool))),
expected)
def test_multiple_images():
images = tf.cast(
[
[[1, 1, 1, 1], [1, 0, 0, 1], [1, 0, 0, 1], [1, 1, 1, 1]],
[[1, 0, 0, 1], [0, 0, 0, 0], [0, 0, 0, 0], [1, 0, 0, 1]],
[[1, 1, 0, 1], [0, 1, 1, 0], [1, 0, 1, 0], [0, 0, 1, 1]],
],
tf.bool,
)
expected = [
[[1, 1, 1, 1], [1, 0, 0, 1], [1, 0, 0, 1], [1, 1, 1, 1]],
[[2, 0, 0, 3], [0, 0, 0, 0], [0, 0, 0, 0], [4, 0, 0, 5]],
[[6, 6, 0, 7], [0, 6, 6, 0], [8, 0, 6, 0], [0, 0, 6, 6]],
]
np.testing.assert_equal(connected_components(images).numpy(), expected)
def test_snake_disconnected():
for i in range(SNAKE.shape[0]):
for j in range(SNAKE.shape[1]):
# If we disconnect any part of the snake except for the endpoints,
# there will be 2 components.
if SNAKE[i, j] and (i, j) not in [(1, 1), (6, 3)]:
disconnected_snake = SNAKE.copy()
disconnected_snake[i, j] = 0
components = connected_components(
tf.cast(disconnected_snake, tf.bool))
assert np.max(components) == 2
bins = np.bincount(components.numpy().ravel())
# Nonzero number of pixels labeled 0, 1, or 2.
assert bins[0] > 0
assert bins[1] > 0
assert bins[2] > 0
def testDisconnected(self):
arr = tf.cast(
[
[1, 0, 0, 1, 0, 0, 0, 0, 1],
[0, 1, 0, 0, 0, 1, 0, 1, 0],
[1, 0, 1, 0, 0, 0, 1, 0, 0],
[0, 0, 0, 0, 1, 0, 0, 0, 0],
[0, 0, 1, 0, 0, 0, 0, 0, 0],
],
tf.bool,
)
expected = [
[1, 0, 0, 2, 0, 0, 0, 0, 3],
[0, 4, 0, 0, 0, 5, 0, 6, 0],
[7, 0, 8, 0, 0, 0, 9, 0, 0],
[0, 0, 0, 0, 10, 0, 0, 0, 0],
[0, 0, 11, 0, 0, 0, 0, 0, 0],
]
self.assertAllEqual(self.evaluate(connected_components(arr)), expected)
def testSnake_disconnected(self):
for i in range(SNAKE.shape[0]):
for j in range(SNAKE.shape[1]):
# If we disconnect any part of the snake except for the endpoints,
# there will be 2 components.
if SNAKE[i, j] and (i, j) not in [(1, 1), (6, 3)]:
disconnected_snake = SNAKE.copy()
disconnected_snake[i, j] = 0
components = self.evaluate(
connected_components(
tf.cast(disconnected_snake, tf.bool)))
self.assertEqual(components.max(), 2,
"disconnect (%d, %d)" % (i, j))
bins = np.bincount(components.ravel())
# Nonzero number of pixels labeled 0, 1, or 2.
self.assertGreater(bins[0], 0)
self.assertGreater(bins[1], 0)
self.assertGreater(bins[2], 0)
def test_disconnected():
arr = tf.cast(
[
[1, 0, 0, 1, 0, 0, 0, 0, 1],
[0, 1, 0, 0, 0, 1, 0, 1, 0],
[1, 0, 1, 0, 0, 0, 1, 0, 0],
[0, 0, 0, 0, 1, 0, 0, 0, 0],
[0, 0, 1, 0, 0, 0, 0, 0, 0],
],
tf.bool,
)
expected = [
[1, 0, 0, 2, 0, 0, 0, 0, 3],
[0, 4, 0, 0, 0, 5, 0, 6, 0],
[7, 0, 8, 0, 0, 0, 9, 0, 0],
[0, 0, 0, 0, 10, 0, 0, 0, 0],
[0, 0, 11, 0, 0, 0, 0, 0, 0],
]
np.testing.assert_equal(connected_components(arr).numpy(), expected)
def testSnake(self):
# Single component with id 1.
self.assertAllEqual(
self.evaluate(connected_components(tf.cast(SNAKE, tf.bool))),
SNAKE)
def testSimple(self):
arr = [[0, 1, 0], [1, 1, 1], [0, 1, 0]]
# Single component with id 1.
self.assertAllEqual(
self.evaluate(connected_components(tf.cast(arr, tf.bool))), arr)
def test_zeros():
np.testing.assert_equal(
connected_components(tf.zeros((100, 20, 50), tf.bool)),
np.zeros((100, 20, 50)))
def testOnes_small(self):
self.assertAllEqual(
self.evaluate(connected_components(tf.ones((3, 5), tf.bool))),
np.ones((3, 5)),
)
def test_ones():
np.testing.assert_equal(
connected_components(tf.ones((100, 20, 50), tf.bool)),
np.tile(np.arange(100)[:, None, None] + 1, [1, 20, 50]),
)
def test_ones_small():
np.testing.assert_equal(
connected_components(tf.ones((3, 5), tf.bool)).numpy(), np.ones(
(3, 5)))
def test_simple():
arr = [[0, 1, 0], [1, 1, 1], [0, 1, 0]]
# Single component with id 1.
np.testing.assert_equal(
connected_components(tf.cast(arr, tf.bool)).numpy(), arr)
def test_snake():
# Single component with id 1.
np.testing.assert_equal(
connected_components(tf.cast(SNAKE, tf.bool)).numpy(), SNAKE)