def test_configure_nginx_simple():
with temp_dir() as temp:
conf_path = join(temp, "nginx.conf")
ud = {"nginx_conf_contents": encodestring(TEST_NGINX_CONF),
"nginx_conf_path": conf_path}
_configure_nginx(test_logger(), ud)
assert open(conf_path, "r").read() == TEST_NGINX_CONF
def test_install_authorized_keys_append():
with temp_dir() as temp:
ssh_dir = join(temp, ".ssh")
makedirs(ssh_dir, mode=0700)
authorized_keys_file = join(ssh_dir, "authorized_keys")
key2 = "ssh-rss ABCD [email protected]"
open(authorized_keys_file, "w").write("%s\n" % key2)
_install_authorized_keys(test_logger(), KEYS_USERDATA, manager=TestAuthorizedKeysManager(temp))
_check_key_installed(temp, KEY1)
_check_key_installed(temp, key2)
def test_reconfigure_nginx_disabled():
with temp_dir() as temp:
conf_path = join(temp, "nginx.conf")
ud = {"nginx_conf_contents": encodestring(TEST_NGINX_CONF),
"nginx_conf_path": conf_path,
"configure_multiple_galaxy_processes": True,
"reconfigure_nginx": False,
"web_thread_count": 2}
_configure_nginx(test_logger(), ud)
rewritten_contents = open(conf_path, "r").read()
assert rewritten_contents == TEST_NGINX_CONF
def test_get_file_from_bucket():
mock_s3_conn = S3ConnMock()
mock_s3_conn.responses.append(MockResponse("Test Contents"))
mock_bucket = BucketMock("bucket_test", mock_s3_conn)
mock_bucket.files["remote_file"] = "moocow"
temp = NamedTemporaryFile().name
assert not exists(temp)
_get_file_from_bucket(test_logger(), mock_s3_conn, "bucket_test",
"remote_file", temp)
assert exists(temp)
assert open(temp, "r").read() == "Test Contents"
def test_configure_nginx_simple_multi_web_threads():
with temp_dir() as temp:
conf_path = join(temp, "nginx.conf")
ud = {"nginx_conf_contents": encodestring(TEST_NGINX_CONF),
"nginx_conf_path": conf_path,
"configure_multiple_galaxy_processes": True,
"web_thread_count": 2}
_configure_nginx(test_logger(), ud)
rewritten_contents = open(conf_path, "r").read()
# Check exactly two web threads configured in nginx.conf.
assert rewritten_contents.find("server localhost:8080;") >= 0
assert rewritten_contents.find("server localhost:8081;") >= 0
assert rewritten_contents.find("server localhost:8082;") == -1
def test_get_file_from_bucket():
mock_s3_conn = S3ConnMock()
mock_s3_conn.responses.append(MockResponse("Test Contents"))
mock_bucket = BucketMock("bucket_test", mock_s3_conn)
mock_bucket.files["remote_file"] = "moocow"
temp = NamedTemporaryFile().name
assert not exists(temp)
_get_file_from_bucket(test_logger(),
mock_s3_conn,
"bucket_test",
"remote_file",
temp)
assert exists(temp)
assert open(temp, "r").read() == "Test Contents"
def test_install_conf_files():
with temp_dir() as temp:
ud = {"conf_files": [{"path": join(temp, "test1"), "content": encodestring("Hello World!")}]}
_install_conf_files(test_logger(), ud)
assert open(join(temp, "test1"), "r").read() == "Hello World!"
def test_install_authorized_keys_fresh():
with temp_dir() as temp:
_install_authorized_keys(test_logger(), KEYS_USERDATA, manager=TestAuthorizedKeysManager(temp))
_check_key_installed(temp, KEY1)
def test_is_running():
# If this test is executing, there must be a python process.
assert _is_running(test_logger(), "python")
# Highly unlikely there is a process called flork78 on this system.
assert not _is_running(test_logger(), "flork78")
def test_make_dir():
temp = NamedTemporaryFile().name
assert not exists(temp)
_make_dir(test_logger(), temp)
assert exists(temp)
