def test_replace_node():
relu1 = Relu(5)
relu2 = Relu(5)
relu_chain = chain(relu1, relu2)
relu1_debug = with_debug(relu1)
debug = Model(
"test",
lambda X: (X, lambda dY: dY),
layers=[relu1, relu2, relu1, relu_chain],
refs={
"relu1": relu1,
"relu2": relu2,
"relu3": relu1
},
)
debug.replace_node(relu1, relu1_debug)
assert debug.layers[0] == relu1_debug
assert debug.layers[1] == relu2
assert debug.layers[2] == relu1_debug
assert debug.get_ref("relu1") == relu1_debug
assert debug.get_ref("relu2") == relu2
assert debug.get_ref("relu3") == relu1_debug
# Check that nodes are replaced recursively
assert debug.layers[3] == relu_chain
assert debug.layers[3].layers[0] == relu1_debug
assert debug.layers[3].layers[1] == relu2
def _resume_model(
model: Model, resume_path: Path, epoch_resume: int, silent: bool = True
) -> None:
msg = Printer(no_print=silent)
msg.info(f"Resume training tok2vec from: {resume_path}")
with resume_path.open("rb") as file_:
weights_data = file_.read()
model.get_ref("tok2vec").from_bytes(weights_data)
# Parse the epoch number from the given weight file
model_name = re.search(r"model\d+\.bin", str(resume_path))
if model_name:
# Default weight file name so read epoch_start from it by cutting off 'model' and '.bin'
epoch_resume = int(model_name.group(0)[5:][:-4]) + 1
msg.info(f"Resuming from epoch: {epoch_resume}")
else:
msg.info(f"Resuming from epoch: {epoch_resume}")
def instance_init(model: Model,
X: List[Doc] = None,
Y: Floats2d = None) -> Model:
tok2vec = model.get_ref("tok2vec")
if X is not None:
tok2vec.initialize(X)
return model
def get_tok2vec_width(model: Model):
nO = None
if model.has_ref("tok2vec"):
tok2vec = model.get_ref("tok2vec")
if tok2vec.has_dim("nO"):
nO = tok2vec.get_dim("nO")
elif tok2vec.has_ref("listener"):
nO = tok2vec.get_ref("listener").get_dim("nO")
return nO
def _resume_model(
model: Model, resume_path: Path, epoch_resume: Optional[int], silent: bool = True
) -> int:
msg = Printer(no_print=silent)
msg.info(f"Resume training tok2vec from: {resume_path}")
with resume_path.open("rb") as file_:
weights_data = file_.read()
model.get_ref("tok2vec").from_bytes(weights_data)
if epoch_resume is None:
# Parse the epoch number from the given weight file
model_name = re.search(r"model\d+\.bin", str(resume_path))
if model_name:
# Default weight file name so read epoch_start from it by cutting off 'model' and '.bin'
epoch_resume = int(model_name.group(0)[5:][:-4]) + 1
else:
# No epoch given and couldn't infer it
raise ValueError(Errors.E1020)
msg.info(f"Resuming from epoch: {epoch_resume}")
return epoch_resume
def debug_model(
config,
resolved_train_config,
nlp,
model: Model,
*,
print_settings: Optional[Dict[str, Any]] = None,
):
if not isinstance(model, Model):
msg.fail(
f"Requires a Thinc Model to be analysed, but found {type(model)} instead.",
exits=1,
)
if print_settings is None:
print_settings = {}
# STEP 0: Printing before training
msg.info(f"Analysing model with ID {model.id}")
if print_settings.get("print_before_training"):
msg.divider(f"STEP 0 - before training")
_print_model(model, print_settings)
# STEP 1: Initializing the model and printing again
X = _get_docs()
# The output vector might differ from the official type of the output layer
with data_validation(False):
try:
dot_names = [resolved_train_config["train_corpus"]]
with show_validation_error():
(train_corpus, ) = resolve_dot_names(config, dot_names)
nlp.initialize(lambda: train_corpus(nlp))
msg.info("Initialized the model with the training corpus.")
except ValueError:
try:
_set_output_dim(nO=7, model=model)
with show_validation_error():
nlp.initialize(
lambda: [Example.from_dict(x, {}) for x in X])
msg.info("Initialized the model with dummy data.")
except Exception:
msg.fail(
"Could not initialize the model: you'll have to provide a valid train_corpus argument in the config file.",
exits=1,
)
if print_settings.get("print_after_init"):
msg.divider(f"STEP 1 - after initialization")
_print_model(model, print_settings)
# STEP 2: Updating the model and printing again
optimizer = Adam(0.001)
set_dropout_rate(model, 0.2)
# ugly hack to deal with Tok2Vec listeners
tok2vec = None
if model.has_ref("tok2vec") and model.get_ref(
"tok2vec").name == "tok2vec-listener":
tok2vec = nlp.get_pipe("tok2vec")
goldY = None
for e in range(3):
if tok2vec:
tok2vec.update([Example.from_dict(x, {}) for x in X])
Y, get_dX = model.begin_update(X)
if goldY is None:
goldY = _simulate_gold(Y)
dY = get_gradient(goldY, Y, model.ops)
get_dX(dY)
model.finish_update(optimizer)
if print_settings.get("print_after_training"):
msg.divider(f"STEP 2 - after training")
_print_model(model, print_settings)
# STEP 3: the final prediction
prediction = model.predict(X)
if print_settings.get("print_prediction"):
msg.divider(f"STEP 3 - prediction")
msg.info(str(prediction))
msg.good(f"Succesfully ended analysis - model looks good.")
def test_model_init():
class MyShim(Shim):
name = "testshim"
model_a = create_model("a")
model = Model(
"test",
lambda X: (X, lambda dY: dY),
dims={
"nI": 10,
"nO": None
},
params={
"W": numpy.zeros((10, )),
"b": None
},
refs={
"a": model_a,
"b": None
},
attrs={"foo": "bar"},
shims=[MyShim(None)],
layers=[model_a, model_a],
)
assert model.has_param("W")
assert model.get_param("W").shape == (10, )
assert model.has_param("b") is None
with pytest.raises(KeyError):
model.get_param("b")
with pytest.raises(KeyError):
model.get_param("X")
model.set_param("X", numpy.zeros((10, )))
assert model.has_param("X")
assert model.get_param("X").shape == (10, )
with model.use_params({(model.id, "X"): numpy.ones((10, ))}):
assert numpy.array_equal(model.get_param("X"), numpy.ones((10, )))
assert numpy.array_equal(model.get_param("X"), numpy.zeros((10, )))
assert not model.has_grad("W")
assert not model.has_grad("xyz")
with pytest.raises(KeyError):
model.get_grad("b")
model.set_param("W", model.ops.alloc1f(10))
model.set_grad("W", model.ops.alloc1f(10))
with pytest.raises(ValueError):
model.inc_grad("W", numpy.zeros((5, 0)))
assert model.has_dim("nI")
assert model.get_dim("nI") == 10
with pytest.raises(KeyError):
model.get_dim("xyz")
with pytest.raises(ValueError):
model.get_dim("nO")
with pytest.raises(KeyError):
model.set_dim("xyz", 20)
with pytest.raises(ValueError):
model.set_dim("nI", 20)
assert model.has_ref("a")
assert model.get_ref("a").name == "a"
assert not model.has_ref("xyz")
with pytest.raises(KeyError):
model.get_ref("xyz")
assert model.has_ref("b") is None
with pytest.raises(ValueError):
model.get_ref("b")
model.set_ref("c", model_a)
assert model.has_ref("c")
assert model.get_ref("c").name == "a"
with pytest.raises(ValueError):
model.set_ref("c", create_model("c"))
assert "foo" in model.attrs
assert "bar" not in model.attrs
assert model.attrs["foo"] == "bar"
with pytest.raises(KeyError):
model.attrs["bar"]
model.attrs["bar"] = "baz"
model_copy = model.copy()
assert model_copy.name == "test"
