def fillInUI(self, parent):
label = Tk.Label(parent,
text="Warning: clipping is turned on (see Side View"
" tool) and will severely slow down POV-Ray raytracing.",
justify='left', height=2)
import tkFont
font = tkFont.Font(root=parent, font=label.cget('font'))
label.config(wraplength=(self.text_width * font.measure('n')))
label.grid(row=0, columnspan=2, sticky=Tk.W, pady=5)
off = Tk.Button(parent, text="Turn off clipping",
command=self.__turnOff)
off.grid(row=1, column=0, pady=1)
if ClipWarning.__dsVar is None:
ClipWarning.__dsVar = Tk.IntVar(chimera.tkgui.app)
ClipWarning.__dsVar.set(False)
ds = Tk.Checkbutton(parent, variable=ClipWarning.__dsVar,
text="Don't show dialog again")
from tkFont import Font
font = Font(font=ds.cget('font'))
font.config(size=int(0.75*float(font.cget('size'))+0.5),
weight='normal')
ds.config(font=font)
ds.grid(row=1, column=1, sticky=Tk.SE, pady=1)
parent.rowconfigure(0, weight=1)
parent.columnconfigure(0, weight=1)
class TkFont():
def __init__(self,
family="Calibri",
weight=NORMAL,
slant=ROMAN,
overstrike=0,
underline=0,
size=12):
'''
family: 字符集
size: 字体大小
weight: "bold" for boldface, "normal" for regular weight.
slant: "italic" for italic, "roman" for unslanted.
underline: 1 for underlined text, 0 for normal.
overstrike: 1 for overstruck text, 0 for normal.
'''
self.font = Font(family=family,
weight=weight,
slant=slant,
overstrike=overstrike,
underline=underline,
size=size)
def get_actual_font_info(self):
return self.font.actual()
def config(self, **kw):
self.font.config(**kw)
def bolditalic_command(self,*args):
current_tags = self.textPad.tag_names()
bold_italic = Font(self.textPad, self.textPad.cget("font"))
bold_italic.config(weight="bold",slant="italic")
self.textPad.tag_config("bldita", font=bold_italic)
if "bldita" in current_tags:
self.textPad.tag_delete("bldita", '1.0', 'end-1c')
else:
self.textPad.tag_add("bldita", '1.0', 'end-1c')
def italic_command(self,*args):
current_tags = self.textPad.tag_names()
italics = Font(self.textPad, self.textPad.cget("font"))
italics.config(slant="italic")
self.textPad.tag_config("ita", font=italics)
if "ita" in current_tags:
self.textPad.tag_delete("ita", '1.0', 'end-1c')
else:
self.textPad.tag_add("ita", '1.0', 'end-1c')
def underline_command(self,*args):
current_tags = self.textPad.tag_names()
underline = Font(self.textPad, self.textPad.cget("font"))
underline.config(underline=True)
self.textPad.tag_config("und", font=underline)
if "und" in current_tags:
self.textPad.tag_delete("und", '1.0', 'end-1c')
else:
self.textPad.tag_add("und", '1.0', 'end-1c')
def font_command(self,*args):
try:
font_specs = askstring("Font", "Font Style-Font Size")
font_specs = font_specs.split('-')
new_font = Font(self.textPad, self.textPad.cget("font"))
new_font.config(family=font_specs[0], size=font_specs[1])
self.textPad.tag_config("newfont", font=new_font)
self.textPad.tag_add("newfont", '1.0', 'end-1c')
except:
pass
def __init__(self, parent):
Tkinter.Frame.__init__(self, parent)
self.menu = Pmw.OptionMenu(self, items=self.ambiguity,
label_text="Ambiguity codes:", labelpos='w',
command=self._configureInfo)
self.menu.grid(row=0)
self.label = Tkinter.Label(self, bd=0, padx=0, pady=0)
from tkFont import Font
font = Font(font=self.label.cget('font'))
font.config(size=int(0.75*float(font.cget('size'))+0.5),
weight="normal")
self.label.config(font=font)
self.label.grid(row=1)
def __init__(self, parent):
Tkinter.Frame.__init__(self, parent)
self.menu = Pmw.OptionMenu(self,
items=self.ambiguity,
label_text="Ambiguity codes:",
labelpos='w',
command=self._configureInfo)
self.menu.grid(row=0)
self.label = Tkinter.Label(self, bd=0, padx=0, pady=0)
from tkFont import Font
font = Font(font=self.label.cget('font'))
font.config(size=int(0.75 * float(font.cget('size')) + 0.5),
weight="normal")
self.label.config(font=font)
self.label.grid(row=1)
class TkFont():
def __init__(self, family = "Calibri", weight = NORMAL, slant = ROMAN, overstrike = 0, underline = 0, size = 12):
'''
family: 字符集
size: 字体大小
weight: "bold" for boldface, "normal" for regular weight.
slant: "italic" for italic, "roman" for unslanted.
underline: 1 for underlined text, 0 for normal.
overstrike: 1 for overstruck text, 0 for normal.
'''
self.font = Font(family = family, weight = weight, slant = slant, overstrike = overstrike, underline = underline, size = size)
def get_actual_font_info(self):
return self.font.actual()
def config(self,**kw):
self.font.config(**kw)
def __init__(self, master=None, title=None, buttons=None, default=None,
help=None, oneshot=None, highlight=None,
keepShown=None, resizable=True, *args, **kw):
if master == None:
from tkgui import app
master = app
else:
self.overMaster = True
self._master = master
self._toplevel = Tk.Toplevel(master, *args, **kw)
self._toplevel.wm_group(master)
if not self.overMaster:
self._idleWaits = 0
#self._toplevel.bind("<Map>", self._initialPosition)
self._toplevel.after_idle(self._initialPosition)
if title:
self.title = title
if not self.title:
self.title = self.name
if self.title:
self._toplevel.title(self.title)
if buttons:
self.buttons = buttons
if highlight and not default:
default = highlight
if default:
self.default = default
if not help is None:
self.help = help
if oneshot:
self.oneshot = oneshot
if keepShown:
self.keepShown = keepShown
if not resizable:
self._toplevel.wm_resizable(0, 0)
# 'OK' needs to be able to delay 'oneshot' destruction
# until after the user-callback returns...
self.delayOneshot = False
#sys.__stderr__.write('Create dialog: %s %s\n' %
# (self.title, str(self._toplevel)))
#self._toplevel.bind("<Destroy>", self.Destroy)
self._toplevel.protocol('WM_DELETE_WINDOW', self.Cancel)
if isinstance(self.buttons, basestring):
# compensate for common error of buttons
# not being a sequence.
self.buttons = (self.buttons,)
if Cancel in self.buttons:
self._toplevel.bind("<Escape>",
lambda e, c=self.Cancel: c())
elif Close in self.buttons:
self._toplevel.bind("<Escape>",
lambda e, c=self.Close: c())
bot = Tk.Frame(self._toplevel)
bot.pack(side=Tk.BOTTOM, fill=Tk.X)
hr = Tk.Frame(self._toplevel, relief=Tk.GROOVE,
borderwidth=1, height=2)
hr.pack(side=Tk.BOTTOM, fill=Tk.X)
if self.keepShown:
self.__ksVar = Tkinter.IntVar(bot)
self.__ksVar.set(False)
ckbut = Tkinter.Checkbutton(bot, variable=self.__ksVar,
text="Keep dialog up after %s" % self.keepShown,
command=self.__keepShownCB)
from tkFont import Font
font = Font(font=ckbut.cget('font'))
font.config(size=int(0.75*float(font.cget('size'))+0.5),
weight='normal')
ckbut.config(font=font)
ckbut.pack(side=Tk.TOP, anchor=Tk.SE)
self.__keepShownCB() # set up initial button assignment
if hasattr(self, 'provideStatus') and self.provideStatus:
slkw = { 'anchor': 'w', 'justify': 'left' }
if self.statusWidth:
slkw['width'] = self.statusWidth
if self.statusPosition == "above":
slMaster = self._toplevel
else:
slMaster = bot
self.statusLine = Tk.Label(slMaster, **slkw)
self._statusBlankHandle = None
if not self.statusResizing:
self.statusLine.bind('<Map>', self._statusMapCB)
if self.statusPosition == "above":
self.statusLine.pack(side=Tk.BOTTOM, fill=Tk.X,
expand=Tk.NO)
else:
self.statusLine.pack(side=Tk.LEFT, fill=Tk.BOTH,
expand=Tk.YES)
if self.help:
import help
help.register(self._toplevel, self.help)
self.buttonWidgets = {}
if resizable:
sg = Ttk.Sizegrip(bot)
sg.pack(anchor=Tk.SE, side=Tk.RIGHT)
self.addSpecialButtons(bot)
buttons = list(self.buttons[:]) # don't destroy original buttons
# if Cancel or Close is present, it should be next to Help
if Cancel in buttons:
buttons.remove(Cancel)
self.buttonWidgets[Cancel] = self.__addButton(bot,
Cancel, self.default is Cancel)
if Close in buttons:
buttons.remove(Close)
self.buttonWidgets[Close] = self.__addButton(bot,
Close, self.default is Close)
buttons.reverse()
for b in buttons:
self.buttonWidgets[b] = self.__addButton(bot, b,
self.default == b)
if self.name:
import dialogs
dialogs.reregister(self.name, self)
# pack last, so that resizing dialog will not occlude
# action buttons
self.__top = Tk.Frame(self._toplevel)
self.__top.pack(side=Tk.TOP, anchor=Tk.W, expand=1,
fill=Tk.BOTH)
# do this after pack so that fillInUI can show progress if
# necessary
self.fillInUI(self.__top)
def fillInUI(self, parent):
import Pmw, Tkinter
self.buttonWidgets['OK']['state'] = 'disabled'
self.buttonWidgets['Apply']['state'] = 'disabled'
from chimera.widgets import ModelScrolledListBox
self.surfListBox = ModelScrolledListBox(
parent,
labelpos='n',
label_text='Surfaces to color by ESP:',
listbox_selectmode="extended",
filtFunc=lambda m: isinstance(m, chimera.MSMSModel),
selectioncommand=self._selSurfCB)
self.surfListBox.grid(row=0, column=0, sticky="nsew", columnspan=2)
Pmw.OptionMenu(parent,
command=self._menuCB,
initialitem="3",
items=[str(x) for x in range(2, 12)],
labelpos='w',
label_text="Number of colors/values:").grid(
row=1, column=0, columnspan=2)
f = self.interpFrame = Tkinter.Frame(parent)
f.grid(row=2, column=0, columnspan=2)
self.wells = []
self.values = []
self._entryOpts = {
'validate': 'real',
'entry_justify': 'center',
'entry_width': 6
}
from CGLtk.color.ColorWell import ColorWell
for color, value in [("red", -10), ("white", 0), ("blue", 10)]:
well = ColorWell(f, color=color)
well.grid(row=0, column=len(self.wells))
self.wells.append(well)
entry = Pmw.EntryField(f, value=str(value), **self._entryOpts)
entry.grid(row=1, column=len(self.values))
self.values.append(entry)
from chimera.tkoptions import FloatOption, BooleanOption
self.distDep = BooleanOption(
parent,
3,
"Distance-dependent dielectric",
True,
None,
balloon="If true, charge falls off with distance squared to\n"
"simulate solvent screening effects")
self.dielectric = FloatOption(parent, 4, "Dielectric constant", 4.0,
None)
self.surfDist = FloatOption(parent,
5,
"Distance from surface",
1.4,
None,
balloon="Potential at this distance from\n"
"the surface is used for coloring")
self.hisGroup = Pmw.Group(parent,
hull_padx=2,
tag_text="Implicit Histidine Protonation")
self.hisGroup.grid(row=6, column=0, columnspan=2, sticky="nsew")
self.hisProtVar = Tkinter.StringVar(parent)
self.hisProtVar.set("name")
interior = self.hisGroup.interior()
interior.columnconfigure(0, weight=1)
lab = Tkinter.Label(
interior,
text="Assumed histidine "
"protonation for\nstructures without explicit hydrogens")
from tkFont import Font
font = Font(font=lab.cget('font'))
font.config(size=int(0.75 * float(font.cget('size'))), slant='italic')
lab.config(font=font)
lab.grid(row=0)
Tkinter.Radiobutton(interior,
variable=self.hisProtVar,
value="name",
text="Residue name-based",
command=self._switchHisList).grid(row=1,
sticky='w')
f = Tkinter.Frame(interior)
f.grid(row=2)
Tkinter.Label(f,
text="HID/HIE/HIP = delta/epsilon/both").grid(row=0,
sticky='w')
self.hisDefault = Pmw.OptionMenu(
f,
initialitem=self.HB,
items=[self.HB, "delta", "epsilon", "both"],
labelpos='w',
label_text="HIS = ",
command=lambda a, s=self: setattr(s, 'hisChanged', True))
self.hisDefault.grid(row=1, sticky='w')
self._pickText = Tkinter.StringVar(parent)
self._pickText.set("Specified individually...")
Tkinter.Radiobutton(interior,
variable=self.hisProtVar,
value="pick",
textvariable=self._pickText,
command=self._switchHisList).grid(row=3,
sticky='w')
Tkinter.Button(parent,
pady=0,
command=self._colorKeyCB,
text="Create corresponding color key").grid(
row=7, column=0, columnspan=2)
self.hisChanged = False
def updateParamFont (self, widget, mul = 2, weight = 'bold'): font = Font (widget, widget['font']) font.config (size = int (round (mul * font['size'])), weight = weight) widget.config (font = font)
def fillInUI(self, parent):
import Pmw, Tkinter
self.buttonWidgets['OK']['state'] = 'disabled'
self.buttonWidgets['Apply']['state'] = 'disabled'
from chimera.widgets import ModelScrolledListBox
self.surfListBox = ModelScrolledListBox(parent, labelpos='n',
label_text='Surfaces to color by ESP:',
listbox_selectmode="extended",
filtFunc=lambda m: isinstance(m, chimera.MSMSModel),
selectioncommand=self._selSurfCB)
self.surfListBox.grid(row=0, column=0, sticky="nsew",
columnspan=2)
Pmw.OptionMenu(parent, command=self._menuCB, initialitem="3",
items=[str(x) for x in range(2, 12)], labelpos='w',
label_text="Number of colors/values:").grid(row=1,
column=0, columnspan=2)
f = self.interpFrame = Tkinter.Frame(parent)
f.grid(row=2, column=0, columnspan=2)
self.wells = []
self.values = []
self._entryOpts = {
'validate': 'real',
'entry_justify': 'center',
'entry_width': 6
}
from CGLtk.color.ColorWell import ColorWell
for color, value in [("red", -10), ("white", 0), ("blue", 10)]:
well = ColorWell(f, color=color)
well.grid(row=0, column=len(self.wells))
self.wells.append(well)
entry = Pmw.EntryField(f, value=str(value),
**self._entryOpts)
entry.grid(row=1, column=len(self.values))
self.values.append(entry)
from chimera.tkoptions import FloatOption, BooleanOption
self.distDep = BooleanOption(parent, 3,
"Distance-dependent dielectric", True, None, balloon=
"If true, charge falls off with distance squared to\n"
"simulate solvent screening effects")
self.dielectric = FloatOption(parent, 4, "Dielectric constant",
4.0, None)
self.surfDist = FloatOption(parent, 5, "Distance from surface",
1.4, None, balloon="Potential at this distance from\n"
"the surface is used for coloring")
self.hisGroup = Pmw.Group(parent, hull_padx=2,
tag_text="Implicit Histidine Protonation")
self.hisGroup.grid(row=6, column=0, columnspan=2, sticky="nsew")
self.hisProtVar = Tkinter.StringVar(parent)
self.hisProtVar.set("name")
interior = self.hisGroup.interior()
interior.columnconfigure(0, weight=1)
lab = Tkinter.Label(interior, text="Assumed histidine "
"protonation for\nstructures without explicit hydrogens")
from tkFont import Font
font = Font(font=lab.cget('font'))
font.config(size=int(0.75 * float(font.cget('size'))),
slant='italic')
lab.config(font=font)
lab.grid(row=0)
Tkinter.Radiobutton(interior, variable=self.hisProtVar,
value="name", text="Residue name-based", command=
self._switchHisList).grid(row=1, sticky='w')
f = Tkinter.Frame(interior)
f.grid(row=2)
Tkinter.Label(f, text="HID/HIE/HIP = delta/epsilon/both").grid(
row=0, sticky='w')
self.hisDefault = Pmw.OptionMenu(f, initialitem=self.HB,
items=[self.HB, "delta", "epsilon", "both"], labelpos='w',
label_text="HIS = ", command=lambda a, s=self:
setattr(s, 'hisChanged', True))
self.hisDefault.grid(row=1, sticky='w')
self._pickText = Tkinter.StringVar(parent)
self._pickText.set("Specified individually...")
Tkinter.Radiobutton(interior, variable=self.hisProtVar,
value="pick", textvariable=self._pickText,
command=self._switchHisList).grid(row=3, sticky='w')
Tkinter.Button(parent, pady=0, command=self._colorKeyCB,
text="Create corresponding color key").grid(row=7,
column=0, columnspan=2)
self.hisChanged = False
import Tkinter
from tkFont import Font
# weight/slant
NORMAL = "normal"
BOLD = "bold"
ITALIC = "italic"
root = Tkinter.Tk()
def families(root=None):
"Get font families (as a tuple)"
if not root:
root = Tkinter._default_root
return root.tk.splitlist(root.tk.call("font", "families"))
def names(root=None):
"Get names of defined fonts (as a tuple)"
if not root:
root = Tkinter._default_root
return root.tk.splitlist(root.tk.call("font", "names"))
# create a font
f = Font(family="times", size=30, weight=NORMAL)
print f.actual()
print f.actual("family")
print f.actual("weight")
print f.config()
print f.cget("family")
print f.cget("weight")
print names()
def __init__(self,
master=None,
title=None,
buttons=None,
default=None,
help=None,
oneshot=None,
highlight=None,
keepShown=None,
resizable=True,
*args,
**kw):
if master == None:
from tkgui import app
master = app
else:
self.overMaster = True
self._master = master
self._toplevel = Tk.Toplevel(master, *args, **kw)
self._toplevel.wm_group(master)
if not self.overMaster:
self._idleWaits = 0
#self._toplevel.bind("<Map>", self._initialPosition)
self._toplevel.after_idle(self._initialPosition)
if title:
self.title = title
if not self.title:
self.title = self.name
if self.title:
self._toplevel.title(self.title)
if buttons:
self.buttons = buttons
if highlight and not default:
default = highlight
if default:
self.default = default
if not help is None:
self.help = help
if oneshot:
self.oneshot = oneshot
if keepShown:
self.keepShown = keepShown
if not resizable:
self._toplevel.wm_resizable(0, 0)
# 'OK' needs to be able to delay 'oneshot' destruction
# until after the user-callback returns...
self.delayOneshot = False
#sys.__stderr__.write('Create dialog: %s %s\n' %
# (self.title, str(self._toplevel)))
#self._toplevel.bind("<Destroy>", self.Destroy)
self._toplevel.protocol('WM_DELETE_WINDOW', self.Cancel)
if isinstance(self.buttons, basestring):
# compensate for common error of buttons
# not being a sequence.
self.buttons = (self.buttons, )
if Cancel in self.buttons:
self._toplevel.bind("<Escape>", lambda e, c=self.Cancel: c())
elif Close in self.buttons:
self._toplevel.bind("<Escape>", lambda e, c=self.Close: c())
bot = Tk.Frame(self._toplevel)
bot.pack(side=Tk.BOTTOM, fill=Tk.X)
hr = Tk.Frame(self._toplevel,
relief=Tk.GROOVE,
borderwidth=1,
height=2)
hr.pack(side=Tk.BOTTOM, fill=Tk.X)
if self.keepShown:
self.__ksVar = Tkinter.IntVar(bot)
self.__ksVar.set(False)
ckbut = Tkinter.Checkbutton(bot,
variable=self.__ksVar,
text="Keep dialog up after %s" %
self.keepShown,
command=self.__keepShownCB)
from tkFont import Font
font = Font(font=ckbut.cget('font'))
font.config(size=int(0.75 * float(font.cget('size')) + 0.5),
weight='normal')
ckbut.config(font=font)
ckbut.pack(side=Tk.TOP, anchor=Tk.SE)
self.__keepShownCB() # set up initial button assignment
if hasattr(self, 'provideStatus') and self.provideStatus:
slkw = {'anchor': 'w', 'justify': 'left'}
if self.statusWidth:
slkw['width'] = self.statusWidth
if self.statusPosition == "above":
slMaster = self._toplevel
else:
slMaster = bot
self.statusLine = Tk.Label(slMaster, **slkw)
self._statusBlankHandle = None
if not self.statusResizing:
self.statusLine.bind('<Map>', self._statusMapCB)
if self.statusPosition == "above":
self.statusLine.pack(side=Tk.BOTTOM, fill=Tk.X, expand=Tk.NO)
else:
self.statusLine.pack(side=Tk.LEFT, fill=Tk.BOTH, expand=Tk.YES)
if self.help:
import help
help.register(self._toplevel, self.help)
self.buttonWidgets = {}
if resizable:
sg = Ttk.Sizegrip(bot)
sg.pack(anchor=Tk.SE, side=Tk.RIGHT)
self.addSpecialButtons(bot)
buttons = list(self.buttons[:]) # don't destroy original buttons
# if Cancel or Close is present, it should be next to Help
if Cancel in buttons:
buttons.remove(Cancel)
self.buttonWidgets[Cancel] = self.__addButton(
bot, Cancel, self.default is Cancel)
if Close in buttons:
buttons.remove(Close)
self.buttonWidgets[Close] = self.__addButton(
bot, Close, self.default is Close)
buttons.reverse()
for b in buttons:
self.buttonWidgets[b] = self.__addButton(bot, b, self.default == b)
if self.name:
import dialogs
dialogs.reregister(self.name, self)
# pack last, so that resizing dialog will not occlude
# action buttons
self.__top = Tk.Frame(self._toplevel)
self.__top.pack(side=Tk.TOP, anchor=Tk.W, expand=1, fill=Tk.BOTH)
# do this after pack so that fillInUI can show progress if
# necessary
self.fillInUI(self.__top)
def fillInUI(self, parent):
self._handlers = {}
desigGroup = Pmw.Group(parent, tag_text="Atoms to Check", hull_padx=2)
desigGroup.grid(row=0, sticky="ew")
from chimera.tkgui import windowSystem
Tkinter.Button(desigGroup.interior(),
command=self._desigCB,
text="Designate").grid(row=0, column=0, sticky='e')
Tkinter.Label(desigGroup.interior(),
text="currently selected"
" atoms for checking").grid(row=0, column=1, sticky='w')
self.desigStatus = Tkinter.Label(desigGroup.interior())
from tkFont import Font
font = Font(font=self.desigStatus.cget('font'))
size = int(font.cget('size'))
if size > 2:
font.config(size=size - 2)
font.config(weight='normal')
self.desigStatus.config(font=font)
from chimera.selection import ItemizedSelection
self.designated = ItemizedSelection(
selChangedCB=self._updateDesigStatus)
self.desigStatus.grid(row=1, column=0, columnspan=2)
self.designated2 = ItemizedSelection(selChangedCB=self._locButtonCB)
if windowSystem == 'aqua':
pady = None
else:
pady = 0
Tkinter.Button(desigGroup.interior(),
command=self._desig2CB,
pady=pady,
text="Designate selection as second set").grid(row=3,
column=1)
self.desig2Status = Tkinter.Label(desigGroup.interior())
if size > 4:
font2 = Font(font=font)
font2.config(size=size - 4)
else:
font2 = font
self.desig2Status.config(font=font2)
self.desig2Status.grid(row=4, column=1)
self.checkLocButtons = Pmw.RadioSelect(
desigGroup.interior(),
pady=0,
orient='vertical',
buttontype='radiobutton',
labelpos='w',
label_text="Check designated\natoms"
" against:",
command=self._locButtonCB)
self.checkLocButtons.grid(row=2, column=0, columnspan=2)
self.checkLocButtons.add("themselves")
self.checkLocButtons.add("all other atoms")
self.checkLocButtons.add("other atoms in same model")
self.checkLocButtons.add(self.CHECK_SET)
self.checkLocButtons.invoke(1)
defGroup = Pmw.Group(parent,
tag_text="Clash/Contact Parameters",
hull_padx=2)
defGroup.grid(row=1, sticky='ew')
self.clashDef = ClashDef(defGroup.interior(),
command=self._checkContinuous,
value=str(prefs[CLASH_THRESHOLD]))
self.clashDef.grid(row=0, sticky='w')
self.hbondAllow = HbondAllow(defGroup.interior(),
command=self._checkContinuous,
value=str(prefs[HBOND_ALLOWANCE]))
self.hbondAllow.grid(row=1, sticky='w')
defaultsFrame = Tkinter.Frame(defGroup.interior())
defaultsFrame.grid(row=2)
Tkinter.Label(defaultsFrame, text="Default").grid(row=0, column=0)
Tkinter.Button(defaultsFrame,
text="clash",
pady=pady,
command=self._clashDefaultsCB).grid(row=0, column=1)
Tkinter.Label(defaultsFrame, text="/").grid(row=0, column=2)
Tkinter.Button(defaultsFrame,
text="contact",
pady=pady,
command=self._contactDefaultsCB).grid(row=0, column=3)
Tkinter.Label(defaultsFrame, text="criteria").grid(row=0, column=4)
bondsFrame = Tkinter.Frame(defGroup.interior())
bondsFrame.grid(row=3, sticky='w')
self.bondsApart = Pmw.OptionMenu(bondsFrame,
labelpos='w',
label_text="Ignore contacts of pairs",
command=self._checkContinuous,
initialitem=str(
prefs[BOND_SEPARATION]),
items=[str(i + 2) for i in range(4)])
self.bondsApart.grid(row=0, column=0)
Tkinter.Label(bondsFrame, text="or fewer bonds apart").grid(row=0,
column=1)
self.ignoreIntraResVar = Tkinter.IntVar(parent)
self.ignoreIntraResVar.set(prefs[IGNORE_INTRA_RES])
Tkinter.Checkbutton(defGroup.interior(),
text="Ignore intra-"
"residue contacts",
variable=self.ignoreIntraResVar,
command=self._checkContinuous).grid(row=4)
actionGroup = Pmw.Group(parent,
tag_text="Treatment of Clash/Contact Atoms",
hull_padx=2)
actionGroup.grid(row=2, sticky='ew')
self.actionSelVar = Tkinter.IntVar(parent)
self.actionSelVar.set(prefs[ACTION_SELECT])
Tkinter.Checkbutton(actionGroup.interior(),
text="Select",
command=self._checkContinuous,
variable=self.actionSelVar).grid(row=0, sticky='w')
self.actionColorVar = Tkinter.IntVar(parent)
self.actionColorVar.set(prefs[ACTION_COLOR])
f = Tkinter.Frame(actionGroup.interior())
f.grid(row=1, sticky='w')
Tkinter.Checkbutton(f,
text="Color",
command=self._checkContinuous,
variable=self.actionColorVar).grid(row=0, column=0)
from CGLtk.color.ColorWell import ColorWell
self.clashColorWell = ColorWell(f,
noneOkay=True,
callback=self._checkContinuous,
color=prefs[CLASH_COLOR])
self.clashColorWell.grid(row=0, column=1)
Tkinter.Label(f, text=" (and color all other atoms").grid(row=0,
column=2)
self.nonclashColorWell = ColorWell(f,
noneOkay=True,
callback=self._checkContinuous,
color=prefs[NONCLASH_COLOR])
self.nonclashColorWell.grid(row=0, column=3)
Tkinter.Label(f, text=")").grid(row=0, column=4)
self.actionPBVar = Tkinter.IntVar(parent)
self.actionPBVar.set(prefs[ACTION_PSEUDOBONDS])
f = Tkinter.Frame(actionGroup.interior())
f.grid(row=2, sticky='w')
Tkinter.Checkbutton(f,
text="Draw pseudobonds of color",
command=self._checkContinuous,
variable=self.actionPBVar).grid(row=0, column=0)
from CGLtk.color.ColorWell import ColorWell
self.pbColorWell = ColorWell(f,
noneOkay=False,
callback=self._checkContinuous,
color=prefs[PB_COLOR])
self.pbColorWell.grid(row=0, column=1)
self.pbWidthEntry = Pmw.EntryField(f,
labelpos='w',
label_text=" and width",
validate={
'validator': 'real',
'min': 0.01
},
entry_width=4,
entry_justify="center",
command=self._checkContinuous,
value=str(prefs[PB_WIDTH]))
self.pbWidthEntry.grid(row=0, column=2)
self.actionAttrVar = Tkinter.IntVar(parent)
self.actionAttrVar.set(prefs[ACTION_ATTR])
self.assignAttrButton = Tkinter.Checkbutton(
actionGroup.interior(),
text="Assign 'overlap' attribute",
variable=self.actionAttrVar)
self.assignAttrButton.grid(row=3, sticky='w')
self.actionWriteInfoVar = Tkinter.IntVar(parent)
self.actionWriteInfoVar.set(prefs[ACTION_WRITEINFO])
self.writeInfoButton = Tkinter.Checkbutton(
actionGroup.interior(),
text="Write information to"
" file",
variable=self.actionWriteInfoVar)
self.writeInfoButton.grid(row=4, sticky='w')
self.actionLogInfoVar = Tkinter.IntVar(parent)
self.actionLogInfoVar.set(prefs[ACTION_REPLYLOG])
self.logInfoButton = Tkinter.Checkbutton(
actionGroup.interior(),
text="Write information to"
" reply log",
variable=self.actionLogInfoVar)
self.logInfoButton.grid(row=5, sticky='w')
freqGroup = Pmw.Group(parent,
tag_text="Frequency of Checking",
hull_padx=2)
freqGroup.grid(row=3, sticky="ew")
self.freqButtons = Pmw.RadioSelect(freqGroup.interior(),
pady=0,
orient='vertical',
buttontype='radiobutton',
labelpos='w',
label_text="Check...",
command=self._freqChangeCB)
self.freqButtons.grid(sticky='w')
self.freqButtons.add(self.FREQ_APPLY)
self.freqButtons.add(self.FREQ_MOTION)
self.freqButtons.add(self.FREQ_CONTINUOUS)
self.freqButtons.invoke(0)
self._updateDesigStatus()
def fillInUI(self, parent):
self._handlers = {}
desigGroup = Pmw.Group(parent, tag_text="Atoms to Check", hull_padx=2)
desigGroup.grid(row=0, sticky="ew")
from chimera.tkgui import windowSystem
Tkinter.Button(desigGroup.interior(), command=self._desigCB,
text="Designate").grid(row=0, column=0, sticky='e')
Tkinter.Label(desigGroup.interior(), text="currently selected"
" atoms for checking").grid(row=0, column=1, sticky='w')
self.desigStatus = Tkinter.Label(desigGroup.interior())
from tkFont import Font
font = Font(font=self.desigStatus.cget('font'))
size = int(font.cget('size'))
if size > 2:
font.config(size=size-2)
font.config(weight='normal')
self.desigStatus.config(font=font)
from chimera.selection import ItemizedSelection
self.designated = ItemizedSelection(
selChangedCB=self._updateDesigStatus)
self.desigStatus.grid(row=1, column=0, columnspan=2)
self.designated2 = ItemizedSelection(selChangedCB=self._locButtonCB)
if windowSystem == 'aqua':
pady = None
else:
pady = 0
Tkinter.Button(desigGroup.interior(), command=self._desig2CB,
pady=pady, text="Designate selection as second set"
).grid(row=3, column=1)
self.desig2Status = Tkinter.Label(desigGroup.interior())
if size > 4:
font2 = Font(font=font)
font2.config(size=size-4)
else:
font2 = font
self.desig2Status.config(font=font2)
self.desig2Status.grid(row=4, column=1)
self.checkLocButtons = Pmw.RadioSelect(desigGroup.interior(),
pady=0, orient='vertical', buttontype='radiobutton',
labelpos='w', label_text="Check designated\natoms"
" against:", command=self._locButtonCB)
self.checkLocButtons.grid(row=2, column=0, columnspan=2)
self.checkLocButtons.add("themselves")
self.checkLocButtons.add("all other atoms")
self.checkLocButtons.add("other atoms in same model")
self.checkLocButtons.add(self.CHECK_SET)
self.checkLocButtons.invoke(1)
defGroup = Pmw.Group(parent,
tag_text="Clash/Contact Parameters", hull_padx=2)
defGroup.grid(row=1, sticky='ew')
self.clashDef = ClashDef(defGroup.interior(),
command=self._checkContinuous,
value=str(prefs[CLASH_THRESHOLD]))
self.clashDef.grid(row=0, sticky='w')
self.hbondAllow = HbondAllow(defGroup.interior(),
command=self._checkContinuous,
value=str(prefs[HBOND_ALLOWANCE]))
self.hbondAllow.grid(row=1, sticky='w')
defaultsFrame = Tkinter.Frame(defGroup.interior())
defaultsFrame.grid(row=2)
Tkinter.Label(defaultsFrame, text="Default").grid(
row=0, column=0)
Tkinter.Button(defaultsFrame, text="clash", pady=pady,
command=self._clashDefaultsCB).grid(row=0, column=1)
Tkinter.Label(defaultsFrame, text="/").grid(row=0, column=2)
Tkinter.Button(defaultsFrame, text="contact", pady=pady,
command=self._contactDefaultsCB).grid(row=0, column=3)
Tkinter.Label(defaultsFrame, text="criteria").grid(
row=0, column=4)
bondsFrame = Tkinter.Frame(defGroup.interior())
bondsFrame.grid(row=3, sticky='w')
self.bondsApart = Pmw.OptionMenu(bondsFrame, labelpos='w',
label_text="Ignore contacts of pairs",
command=self._checkContinuous,
initialitem=str(prefs[BOND_SEPARATION]),
items=[str(i+2) for i in range(4)])
self.bondsApart.grid(row=0, column=0)
Tkinter.Label(bondsFrame, text="or fewer bonds apart").grid(
row=0, column=1)
self.ignoreIntraResVar = Tkinter.IntVar(parent)
self.ignoreIntraResVar.set(prefs[IGNORE_INTRA_RES])
Tkinter.Checkbutton(defGroup.interior(), text="Ignore intra-"
"residue contacts", variable=self.ignoreIntraResVar,
command=self._checkContinuous
).grid(row=4)
actionGroup = Pmw.Group(parent, tag_text=
"Treatment of Clash/Contact Atoms", hull_padx=2)
actionGroup.grid(row=2, sticky='ew')
self.actionSelVar = Tkinter.IntVar(parent)
self.actionSelVar.set(prefs[ACTION_SELECT])
Tkinter.Checkbutton(actionGroup.interior(), text="Select",
command=self._checkContinuous,
variable=self.actionSelVar).grid(row=0, sticky='w')
self.actionColorVar = Tkinter.IntVar(parent)
self.actionColorVar.set(prefs[ACTION_COLOR])
f = Tkinter.Frame(actionGroup.interior())
f.grid(row=1, sticky='w')
Tkinter.Checkbutton(f, text="Color",
command=self._checkContinuous,
variable=self.actionColorVar).grid(row=0, column=0)
from CGLtk.color.ColorWell import ColorWell
self.clashColorWell = ColorWell(f, noneOkay=True,
callback=self._checkContinuous,
color=prefs[CLASH_COLOR])
self.clashColorWell.grid(row=0, column=1)
Tkinter.Label(f, text=" (and color all other atoms").grid(row=0,
column=2)
self.nonclashColorWell = ColorWell(f, noneOkay=True,
callback=self._checkContinuous,
color=prefs[NONCLASH_COLOR])
self.nonclashColorWell.grid(row=0, column=3)
Tkinter.Label(f, text=")").grid(row=0, column=4)
self.actionPBVar = Tkinter.IntVar(parent)
self.actionPBVar.set(prefs[ACTION_PSEUDOBONDS])
f = Tkinter.Frame(actionGroup.interior())
f.grid(row=2, sticky='w')
Tkinter.Checkbutton(f, text="Draw pseudobonds of color",
command=self._checkContinuous,
variable=self.actionPBVar).grid(row=0, column=0)
from CGLtk.color.ColorWell import ColorWell
self.pbColorWell = ColorWell(f, noneOkay=False,
callback=self._checkContinuous,
color=prefs[PB_COLOR])
self.pbColorWell.grid(row=0, column=1)
self.pbWidthEntry = Pmw.EntryField(f, labelpos='w',
label_text=" and width", validate={'validator': 'real',
'min': 0.01}, entry_width=4, entry_justify="center",
command=self._checkContinuous,
value=str(prefs[PB_WIDTH]))
self.pbWidthEntry.grid(row=0, column=2)
self.actionAttrVar = Tkinter.IntVar(parent)
self.actionAttrVar.set(prefs[ACTION_ATTR])
self.assignAttrButton = Tkinter.Checkbutton(
actionGroup.interior(),
text="Assign 'overlap' attribute",
variable=self.actionAttrVar)
self.assignAttrButton.grid(row=3, sticky='w')
self.actionWriteInfoVar = Tkinter.IntVar(parent)
self.actionWriteInfoVar.set(prefs[ACTION_WRITEINFO])
self.writeInfoButton = Tkinter.Checkbutton(
actionGroup.interior(), text="Write information to"
" file", variable=self.actionWriteInfoVar)
self.writeInfoButton.grid(row=4, sticky='w')
self.actionLogInfoVar = Tkinter.IntVar(parent)
self.actionLogInfoVar.set(prefs[ACTION_REPLYLOG])
self.logInfoButton = Tkinter.Checkbutton(
actionGroup.interior(), text="Write information to"
" reply log", variable=self.actionLogInfoVar)
self.logInfoButton.grid(row=5, sticky='w')
freqGroup = Pmw.Group(parent, tag_text="Frequency of Checking",
hull_padx=2)
freqGroup.grid(row=3, sticky="ew")
self.freqButtons = Pmw.RadioSelect(freqGroup.interior(),
pady=0, orient='vertical', buttontype='radiobutton',
labelpos='w', label_text= "Check...",
command=self._freqChangeCB)
self.freqButtons.grid(sticky='w')
self.freqButtons.add(self.FREQ_APPLY)
self.freqButtons.add(self.FREQ_MOTION)
self.freqButtons.add(self.FREQ_CONTINUOUS)
self.freqButtons.invoke(0)
self._updateDesigStatus()
import Tkinter
from tkFont import Font
# weight/slant
NORMAL = "normal"
BOLD = "bold"
ITALIC = "italic"
root = Tkinter.Tk()
def families(root=None):
"Get font families (as a tuple)"
if not root:
root = Tkinter._default_root
return root.tk.splitlist(root.tk.call("font", "families"))
def names(root=None):
"Get names of defined fonts (as a tuple)"
if not root:
root = Tkinter._default_root
return root.tk.splitlist(root.tk.call("font", "names"))
# create a font
f = Font(family="times", size=30, weight=NORMAL)
print f.actual()
print f.actual("family")
print f.actual("weight")
print f.config()
print f.cget("family")
print f.cget("weight")
print names()
print f.measure("hello"), f.metrics("linespace")
