__import__(name)
return sys.modules[name]
from collections import namedtuple
import topo
import param
from lancet import PrettyPrinted
from lancet import CommandTemplate
from lancet import Launcher, review_and_launch
from lancet import NumpyFile
from topo.misc.commandline import default_output_path
review_and_launch.output_directory = default_output_path()
Launcher.output_directory = default_output_path()
class param_formatter(param.ParameterizedFunction):
"""
This class is closely related to the param_formatter class in
topo/command/__init__.py. Like that default class, it formats
parameters as a string for use in a directory name. Unlike that
default class, it does not use the parameters repr methods but the
exact, succinct commandline representation as returned by a Lancet
Args object.
This version has several advantages over the default:
- It formats values exactly as they appear in a command. For
from lancet import List, Args
import topo
try:
from external import sys_paths
submodule_paths = sys_paths()
ordering = ['topographica', 'param', 'paramtk', 'imagen', 'lancet']
summarized = ['topographica', 'param', 'imagen', 'lancet']
submodules = [[p for p in submodule_paths if p.endswith(name)][0]
for name in ordering]
except:
submodules = []
from topo.misc.commandline import default_output_path
review_and_launch.output_directory = default_output_path()
Launcher.output_directory = default_output_path()
class topo_metadata(param.Parameterized):
"""
Topographica specific helper function that expands on Lancet's
vcs_metadata function to generate suitable metadata information for
logging with Lancet. Records Topographica version control
information as well as information about all relevant submodules
and the current numpy version.
No arguments should be necessary when either contructing or calling
this object as the default behaviour is designed to be useful. The
summary method prints out the key information collected to assist
with reproducibility. For instance, this may be called to print all
# Configuration file for ipython. c = get_config() import sys, os profile_dir = os.path.split(__file__)[0] project_dir = os.path.join(profile_dir, "..", "..", "..") sys.path = [os.path.abspath(project_dir)] + sys.path import external import param from topo.misc.commandline import default_output_path param.resolve_path.search_paths.append(default_output_path()) # To customize your personal settings, (e.g default settings of the # Topographica or Imagen IPython extensions), add a python script file # to the 'startup' folder. For instance, you could introduce a startup # file 'settings.py' with the following contents: # import dataviews # dataviews.ipython.VIDEO_FORMAT = 'gif' # dataviews.ipython.WARN_MISFORMATTED_DOCSTRINGS = True # For more information, please consult the README file in the # 'startup' directory.
# Configuration file for ipython. c = get_config() import sys, os profile_dir = os.path.split(__file__)[0] project_dir = os.path.join(profile_dir, '..', '..', '..') sys.path = [os.path.abspath(project_dir)] + sys.path import external import param from topo.misc.commandline import default_output_path param.resolve_path.search_paths.append(default_output_path()) # To customize your personal settings, (e.g default settings of the # Topographica or Imagen IPython extensions), add a python script file # to the 'startup' folder. For instance, you could introduce a startup # file 'settings.py' with the following contents: # import dataviews # dataviews.ipython.VIDEO_FORMAT = 'gif' # dataviews.ipython.WARN_MISFORMATTED_DOCSTRINGS = True # For more information, please consult the README file in the # 'startup' directory.