def tableQaFactory(db, table, reporter, sumTable):
"""Returns tableQa object according to trackDb track type."""
tableType = getTrackType(db, table)
if not tableType:
return TableQa(db, table, tableType, reporter, sumTable)
elif tableType in pslTypes:
return PslQa(db, table, tableType, reporter, sumTable)
elif tableType in genePredTypes:
return GenePredQa(db, table, tableType, reporter, sumTable)
elif tableType in otherPositionalTypes:
return PositionalQa(db, table, tableType, reporter, sumTable)
elif tableType in pointerTypes:
return PointerQa(db, table, tableType, reporter, sumTable)
else:
raise Exception(db + table + " has unknown track type " + tableType)
def tableQaFactory(db, table, reporter, sumTable):
"""Returns tableQa object according to trackDb track type."""
tableType = tableTypeUtils.getTrackType(db, table)
if tableType == None:
return TableQa(db, table, tableType, reporter, sumTable)
elif tableTypeUtils.isPsl(tableType):
return PslQa(db, table, tableType, reporter, sumTable)
elif tableTypeUtils.isGenePred(tableType):
return GenePredQa(db, table, tableType, reporter, sumTable)
elif tableTypeUtils.isPositional(tableType):
return PositionalQa(db, table, tableType, reporter, sumTable)
elif tableTypeUtils.isPointer(tableType):
return PointerQa(db, table, tableType, reporter, sumTable)
else:
raise Exception(db + table + " has unknown track type " + tableType)
def statistics(self):
TableQa.statistics(self)
def validate(self):
"""Adds pointer-specific table checks to basic table checks."""
TableQa.checkForUnderscores(self)
PositionalQa.checkLabelLengths(self)
def statistics(self):
TableQa.statistics(self)
def validate(self):
"""Adds pointer-specific table checks to errorLog."""
TableQa.checkForUnderscores(self)
PositionalQa.checkLabelLengths(self)