Esempio n. 1
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 def __init__(self,
              character="",
              atom_serial=0,
              atom_name="",
              alter_local_indicater="",
              residue_name="",
              chain_indicater="",
              residue_serial=0,
              code_for_insertions_of_residues="",
              atom_coor_x=0.0,
              atom_coor_y=0.0,
              atom_coor_z=0.0,
              occupancy=0.0,
              temp_factor=0,
              segment_indent="",
              element_symbol="",
              charge=""):
     unit_atom.__init__(self,atom_name,atom_serial,residue_name,residue_serial,\
         atom_coor_x,atom_coor_y,atom_coor_z)
     self.character = character
     self.alter_local_indicater = alter_local_indicater
     self.chain_indicater = chain_indicater
     self.code_for_insertions_of_residues = code_for_insertions_of_residues
     self.occupancy = occupancy
     self.temp_factor = temp_factor
     self.segment_indent = segment_indent
     self.element_symbol = element_symbol
     self.charge = charge
Esempio n. 2
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 def __init__(self,residue_name=" ",residue_serial = 0 , atom_name=" ",atom_serial = 0,
         atom_coor_x = 0.0 , atom_coor_y = 0.0 , atom_coor_z = 0.0,
         atom_velo_x = 0.0 , atom_velo_y = 0.0 , atom_velo_z = 0.0):
     unit_atom.__init__(self,atom_name,atom_serial,residue_name,residue_serial,\
         atom_coor_x,atom_coor_y,atom_coor_z)
     self.atom_velo_x=atom_velo_x
     self.atom_velo_y=atom_velo_y
     self.atom_velo_z=atom_velo_z
Esempio n. 3
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 def __init__(self,
              residue_name=" ",
              residue_serial=0,
              atom_name=" ",
              atom_serial=0,
              atom_coor_x=0.0,
              atom_coor_y=0.0,
              atom_coor_z=0.0,
              atom_velo_x=0.0,
              atom_velo_y=0.0,
              atom_velo_z=0.0):
     unit_atom.__init__(self,atom_name,atom_serial,residue_name,residue_serial,\
         atom_coor_x,atom_coor_y,atom_coor_z)
     self.atom_velo_x = atom_velo_x
     self.atom_velo_y = atom_velo_y
     self.atom_velo_z = atom_velo_z
Esempio n. 4
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 def __init__(self , character = "" , atom_serial = 0 , atom_name = "" ,
         alter_local_indicater = "" , residue_name = "" , chain_indicater = "" ,
         residue_serial = 0 , code_for_insertions_of_residues = "" ,
         atom_coor_x = 0.0 , atom_coor_y = 0.0 , atom_coor_z = 0.0 , occupancy = 0.0 , 
         temp_factor = 0 , segment_indent = "" , element_symbol = "" , 
         charge = ""):
     unit_atom.__init__(self,atom_name,atom_serial,residue_name,residue_serial,\
         atom_coor_x,atom_coor_y,atom_coor_z)
     self.character = character
     self.alter_local_indicater = alter_local_indicater
     self.chain_indicater = chain_indicater
     self.code_for_insertions_of_residues = code_for_insertions_of_residues
     self.occupancy = occupancy
     self.temp_factor = temp_factor
     self.segment_indent = segment_indent
     self.element_symbol = element_symbol
     self.charge = charge