def simple_example():
import utils
utils.fix_random_seeds()
X = np.array([
[4., 4., 2., 0.],
[4., 61., 8., 18.],
[2., 8., 10., 0.],
[0., 18., 0., 5.]])
mod = TorchGloVe(embed_dim=2, max_iter=1000)
print(mod)
G = mod.fit(X)
print("\nLearned vectors:")
print(G)
print("We expect the dot product of learned vectors "
"to be proportional to the log co-occurrence probs. "
"Let's see how close we came:")
corr = mod.score(X)
print("Pearson's R: {} ".format(corr))
return corr
def simple_example(group_size=100, vec_dim=2):
from sklearn.model_selection import train_test_split
utils.fix_random_seeds()
color_seqs, word_seqs, vocab = create_example_dataset(
group_size=group_size, vec_dim=vec_dim)
X_train, X_test, y_train, y_test = train_test_split(
color_seqs, word_seqs)
mod = ContextualColorDescriber(vocab)
print(mod)
mod.fit(X_train, y_train)
preds = mod.predict(X_test)
mod.predict_proba(X_test, y_test)
correct = 0
for y, p in zip(y_test, preds):
correct += int(y == p)
print("\nExact sequence: {} of {} correct".format(correct, len(y_test)))
lis_acc = mod.listener_accuracy(X_test, y_test)
print("\nListener accuracy {}".format(lis_acc))
return lis_acc
def simple_example():
import numpy as np
import utils
utils.fix_random_seeds()
def randmatrix(m, n, sigma=0.1, mu=0):
return sigma * np.random.randn(m, n) + mu
rank = 20
nrow = 2000
ncol = 100
X = randmatrix(nrow, rank).dot(randmatrix(rank, ncol))
mod = TorchAutoencoder()
print(mod)
H = mod.fit(X)
X_pred = mod.predict(X)
mse = ((X_pred - X)**2).mean()
print("\nMSE between actual and reconstructed: {}".format(mse))
r2 = mod.score(X)
print("R^2 score: {}".format(r2))
print("Hidden representations")
print(H)
return r2
def simple_example():
utils.fix_random_seeds()
vocab = ['a', 'b', '$UNK']
# No b before an a
train = [[list('ab'), 'good'], [list('aab'),
'good'], [list('abb'), 'good'],
[list('aabb'), 'good'], [list('ba'), 'bad'], [list('baa'), 'bad'],
[list('bba'), 'bad'], [list('bbaa'), 'bad'], [list('aba'), 'bad']]
test = [[list('baaa'), 'bad'], [list('abaa'), 'bad'],
[list('bbaa'), 'bad'], [list('aaab'), 'good'],
[list('aaabb'), 'good']]
X_train, y_train = zip(*train)
X_test, y_test = zip(*test)
mod = TorchRNNClassifier(vocab)
print(mod)
mod.fit(X_train, y_train)
preds = mod.predict(X_test)
print("\nPredictions:")
for ex, pred, gold in zip(X_test, preds, y_test):
score = "correct" if pred == gold else "incorrect"
print("{0:>6} - predicted: {1:>4}; actual: {2:>4} - {3}".format(
"".join(ex), pred, gold, score))
return mod.score(X_test, y_test)
def simple_example():
"""Assess on the digits dataset."""
from sklearn.datasets import load_digits
from sklearn.model_selection import train_test_split
from sklearn.metrics import classification_report, accuracy_score
utils.fix_random_seeds()
digits = load_digits()
X = digits.data
y = digits.target
X_train, X_test, y_train, y_test = train_test_split(X,
y,
test_size=0.33,
random_state=42)
mod = TorchDeepNeuralClassifier(num_layers=2)
print(mod)
mod.fit(X_train, y_train)
preds = mod.predict(X_test)
print("\nClassification report:")
print(classification_report(y_test, preds))
return accuracy_score(y_test, preds)
def test_fix_random_seeds_system(set_value):
params = dict(seed=42,
set_system=set_value,
set_torch=False,
set_torch_cudnn=False)
utils.fix_random_seeds(**params)
x = np.random.random()
utils.fix_random_seeds(**params)
y = np.random.random()
assert (x == y) == set_value
def test_fix_random_seeds_pytorch(set_value):
import torch
params = dict(seed=42,
set_system=False,
set_torch=set_value,
set_torch_cudnn=set_value)
utils.fix_random_seeds(**params)
x = torch.rand(1)
utils.fix_random_seeds(**params)
y = torch.rand(1)
assert (x == y) == set_value
def test_fix_random_seeds_tensorflow(set_value):
import tensorflow as tf
params = dict(seed=42,
set_system=False,
set_tensorflow=set_value,
set_torch=True,
set_torch_cudnn=True)
utils.fix_random_seeds(**params)
x = tf.random.uniform([1]).numpy()
utils.fix_random_seeds(**params)
y = tf.random.uniform([1]).numpy()
assert (x == y) == set_value
def simple_example():
from nltk.tree import Tree
from sklearn.metrics import accuracy_score
import utils
utils.fix_random_seeds()
train = [
"(odd 1)", "(even 2)", "(even (odd 1) (neutral (neutral +) (odd 1)))",
"(odd (odd 1) (neutral (neutral +) (even 2)))",
"(odd (even 2) (neutral (neutral +) (odd 1)))",
"(even (even 2) (neutral (neutral +) (even 2)))",
"(even (odd 1) (neutral (neutral +) (odd (odd 1) (neutral (neutral +) (even 2)))))"
]
test = [
"(odd (odd 1))", "(even (even 2))",
"(odd (odd 1) (neutral (neutral +) (even (odd 1) (neutral (neutral +) (odd 1)))))",
"(even (even 2) (neutral (neutral +) (even (even 2) (neutral (neutral +) (even 2)))))",
"(odd (even 2) (neutral (neutral +) (odd (even 2) (neutral (neutral +) (odd 1)))))",
"(even (odd 1) (neutral (neutral +) (odd (even 2) (neutral (neutral +) (odd 1)))))",
"(odd (even 2) (neutral (neutral +) (odd (odd 1) (neutral (neutral +) (even 2)))))"
]
vocab = ["1", "+", "2"]
X_train = [Tree.fromstring(x) for x in train]
y_train = [t.label() for t in X_train]
X_test = [Tree.fromstring(x) for x in test]
y_test = [t.label() for t in X_test]
mod = TreeNN(vocab)
print(mod)
mod.fit(X_train, y_train)
print("\nTest predictions:")
preds = mod.predict(X_test)
correct = 0
for tree, label, pred in zip(X_test, y_test, preds):
correct += int(pred == label)
print("{}\n\tPredicted: {}\n\tActual: {}".format(tree, pred, label))
print("{}/{} correct".format(correct, len(X_test)))
return accuracy_score(y_test, preds)
def main():
args = configuration.parse_args()
config = configuration.load_config(args.config_path)
utils.setup_logging()
logging.info(f'args: {args}')
logging.info(f'config: {config}')
utils.fix_random_seeds(config['hyperparameters']['seed'])
a_train_dataset, a_test_dataset, a_test_length = create_image_action_dataset(
config, 'domain_a')
b_train_dataset, b_test_dataset, b_test_length = create_image_action_dataset(
config, 'domain_b')
trainer = create_models_and_trainer(config)
output_dir, (samples_dir, summaries_dir,
checkpoints_dir) = utils.create_output_dirs(
args.output_dir_base, 'unit', args.tag,
['samples', 'summaries', 'checkpoints'])
configuration.dump_config(config, os.path.join(output_dir, 'config.yaml'))
checkpoint = reload_checkpoint(trainer, checkpoints_dir,
config['restore_path'])
summary_writer = tf.summary.create_file_writer(summaries_dir)
with summary_writer.as_default():
datasets = [(a_train_dataset, a_test_dataset),
(b_train_dataset, b_test_dataset)]
test_iterations = max(a_test_length, b_test_length)
main_loop(trainer, datasets, test_iterations, config, checkpoint,
samples_dir)
if args.summarize:
trainer.model.encoder_a.model.summary()
trainer.model.encoder_b.model.summary()
trainer.model.encoder_shared.model.summary()
trainer.model.decoder_shared.model.summary()
trainer.model.decoder_b.model.summary()
trainer.model.decoder_a.model.summary()
trainer.model.downstreamer.model.summary()
trainer.controller.model.summary()
trainer.model.dis_a.model.summary()
trainer.model.dis_b.model.summary()
def test_fix_random_seeds_tensorflow(set_value):
utils.fix_random_seeds(seed=42, set_tensorflow=set_value)
x = tf.random.uniform([1]).numpy()
utils.fix_random_seeds(seed=42, set_tensorflow=set_value)
y = tf.random.uniform([1]).numpy()
assert (x == y) == set_value
def test_fix_random_seeds_pytorch(set_value):
utils.fix_random_seeds(seed=42, set_torch=set_value)
x = torch.rand(1)
utils.fix_random_seeds(seed=42, set_torch=set_value)
y = torch.rand(1)
assert (x == y) == set_value
def test_fix_random_seeds_system(set_value):
utils.fix_random_seeds(seed=42, set_system=set_value)
x = np.random.random()
utils.fix_random_seeds(seed=42, set_system=set_value)
y = np.random.random()
assert (x == y) == set_value
break
# Write train loss per step
write_to_json_file(os.path.join(path,
f"{file_name_head}_train_loss_per_epoch"), train_loss)
if __name__ == "__main__":
parser = argparse.ArgumentParser()
## Required parameters
parser.add_argument("--data_path",
default=None,
type=str,
required=True,
help="The serialized input ppdb pairs.")
args = parser.parse_args()
fix_random_seeds(seed=42)
featurizer = "avg_pooling_featurizer"
dataset = PPDBSerializedDataset(args.data_path, featurizer)
model = MLP1Classifier(2, input_dim=768)
logger.info('Input Data: {} | Featurizer: {}'.format(args.data_path, featurizer))
serialized_train(dataset,
model,
encoder='BertModel',
featurizer=featurizer,
path = "./model_checkpoint",
epochs=100,
lr=0.01,
batch_size=1024)
def train_dino(args):
utils.init_distributed_mode(args)
utils.fix_random_seeds(args.seed)
print("git:\n {}\n".format(utils.get_sha()))
print("\n".join("%s: %s" % (k, str(v))
for k, v in sorted(dict(vars(args)).items())))
cudnn.benchmark = True
# ============ preparing data ... ============
transform = DataAugmentationDINO(
args.global_crops_scale,
args.local_crops_scale,
args.local_crops_number,
)
#dataset = datasets.ImageFolder(args.data_path, transform=transform)
from sen12ms import get_transform
dataset = AllSen12MSDataset(args.data_path,
"train",
transform=transform,
tansform_coord=None,
classes=None,
seasons=None,
split_by_region=True,
download=False)
sampler = torch.utils.data.DistributedSampler(dataset, shuffle=True)
data_loader = torch.utils.data.DataLoader(
dataset,
sampler=sampler,
batch_size=args.batch_size_per_gpu,
num_workers=args.num_workers,
pin_memory=True,
drop_last=True,
)
print(f"Data loaded: there are {len(dataset)} images.")
# ============ building student and teacher networks ... ============
# if the network is a vision transformer (i.e. deit_tiny, deit_small, vit_base)
if args.arch in vits.__dict__.keys():
student = vits.__dict__[args.arch](
patch_size=args.patch_size,
drop_path_rate=0.1, # stochastic depth
)
teacher = vits.__dict__[args.arch](patch_size=args.patch_size)
embed_dim = student.embed_dim
student = utils.replace_input_layer(student, inchannels=13)
teacher = utils.replace_input_layer(teacher, inchannels=13)
# otherwise, we check if the architecture is in torchvision models
elif args.arch in torchvision_models.__dict__.keys():
student = torchvision_models.__dict__[args.arch]()
teacher = torchvision_models.__dict__[args.arch]()
embed_dim = student.fc.weight.shape[1]
else:
print(f"Unknow architecture: {args.arch}")
# multi-crop wrapper handles forward with inputs of different resolutions
student = utils.MultiCropWrapper(
student,
DINOHead(
embed_dim,
args.out_dim,
use_bn=args.use_bn_in_head,
norm_last_layer=args.norm_last_layer,
))
teacher = utils.MultiCropWrapper(
teacher,
DINOHead(embed_dim, args.out_dim, args.use_bn_in_head),
)
# move networks to gpu
student, teacher = student.cuda(), teacher.cuda()
# synchronize batch norms (if any)
if utils.has_batchnorms(student):
student = nn.SyncBatchNorm.convert_sync_batchnorm(student)
teacher = nn.SyncBatchNorm.convert_sync_batchnorm(teacher)
# we need DDP wrapper to have synchro batch norms working...
teacher = nn.parallel.DistributedDataParallel(teacher,
device_ids=[args.gpu])
teacher_without_ddp = teacher.module
else:
# teacher_without_ddp and teacher are the same thing
teacher_without_ddp = teacher
student = nn.parallel.DistributedDataParallel(student,
device_ids=[args.gpu])
# teacher and student start with the same weights
teacher_without_ddp.load_state_dict(student.module.state_dict())
# there is no backpropagation through the teacher, so no need for gradients
for p in teacher.parameters():
p.requires_grad = False
print(f"Student and Teacher are built: they are both {args.arch} network.")
# ============ preparing loss ... ============
dino_loss = DINOLoss(
args.out_dim,
args.local_crops_number +
2, # total number of crops = 2 global crops + local_crops_number
args.warmup_teacher_temp,
args.teacher_temp,
args.warmup_teacher_temp_epochs,
args.epochs,
).cuda()
# ============ preparing optimizer ... ============
params_groups = utils.get_params_groups(student)
if args.optimizer == "adamw":
optimizer = torch.optim.AdamW(params_groups) # to use with ViTs
elif args.optimizer == "sgd":
optimizer = torch.optim.SGD(params_groups, lr=0,
momentum=0.9) # lr is set by scheduler
elif args.optimizer == "lars":
optimizer = utils.LARS(
params_groups) # to use with convnet and large batches
# for mixed precision training
fp16_scaler = None
if args.use_fp16:
fp16_scaler = torch.cuda.amp.GradScaler()
# ============ init schedulers ... ============
lr_schedule = utils.cosine_scheduler(
args.lr * (args.batch_size_per_gpu * utils.get_world_size()) /
256., # linear scaling rule
args.min_lr,
args.epochs,
len(data_loader),
warmup_epochs=args.warmup_epochs,
)
wd_schedule = utils.cosine_scheduler(
args.weight_decay,
args.weight_decay_end,
args.epochs,
len(data_loader),
)
# momentum parameter is increased to 1. during training with a cosine schedule
momentum_schedule = utils.cosine_scheduler(args.momentum_teacher, 1,
args.epochs, len(data_loader))
print(f"Loss, optimizer and schedulers ready.")
# ============ optionally resume training ... ============
to_restore = {"epoch": 0}
utils.restart_from_checkpoint(
os.path.join(args.output_dir, "checkpoint.pth"),
run_variables=to_restore,
student=student,
teacher=teacher,
optimizer=optimizer,
fp16_scaler=fp16_scaler,
dino_loss=dino_loss,
)
start_epoch = to_restore["epoch"]
start_time = time.time()
print("Starting DINO training !")
for epoch in range(start_epoch, args.epochs):
data_loader.sampler.set_epoch(epoch)
# ============ training one epoch of DINO ... ============
train_stats = train_one_epoch(student, teacher, teacher_without_ddp,
dino_loss, data_loader, optimizer,
lr_schedule, wd_schedule,
momentum_schedule, epoch, fp16_scaler,
args)
# ============ writing logs ... ============
save_dict = {
'student': student.state_dict(),
'teacher': teacher.state_dict(),
'optimizer': optimizer.state_dict(),
'epoch': epoch + 1,
'args': args,
'dino_loss': dino_loss.state_dict(),
}
if fp16_scaler is not None:
save_dict['fp16_scaler'] = fp16_scaler.state_dict()
utils.save_on_master(save_dict,
os.path.join(args.output_dir, 'checkpoint.pth'))
if args.saveckp_freq and epoch % args.saveckp_freq == 0:
utils.save_on_master(
save_dict,
os.path.join(args.output_dir, f'checkpoint{epoch:04}.pth'))
log_stats = {
**{f'train_{k}': v
for k, v in train_stats.items()}, 'epoch': epoch
}
if utils.is_main_process():
with (Path(args.output_dir) / "log.txt").open("a") as f:
f.write(json.dumps(log_stats) + "\n")
total_time = time.time() - start_time
total_time_str = str(datetime.timedelta(seconds=int(total_time)))
print('Training time {}'.format(total_time_str))
total_grad += grad * (self.lr) / (2 * self.num_agents *
self.weights_std**2)
self.grads.append(total_grad)
self.grads.update_orthogonal()
centroid_parameters += total_grad
# Update the centroid
self.centroid.init_from_parameters(centroid_parameters)
print("Gradient norm: {}".format(torch.norm(grad, p=2)))
return report_rew, perturbs_timesteps
seed = 0
env_name = "Hopper-v2"
fix_random_seeds(seed)
writer = SummaryWriter()
env = gym.make(env_name)
policy = MujocoPolicy(len(env.observation_space.high),
len(env.action_space.high))
agent = ESAgent(policy)
population = GuidedESPopulation(num_agents=40,
num_trials=5,
lr=0.01,
initial_agent=agent,
agent_class=ESAgent,
env_name=env_name,
weights_std=0.02,
seed=seed,
num_parallel=3,
import numpy as np
import pandas as pd
import pytest
import tempfile
import torch.nn as nn
import utils
from test_torch_model_base import PARAMS_WITH_TEST_VALUES as BASE_PARAMS
from torch_glove import TorchGloVe, simple_example
from np_glove import GloVe
__author__ = "Christopher Potts"
__version__ = "CS224u, Stanford, Spring 2021"
utils.fix_random_seeds()
PARAMS_WITH_TEST_VALUES = [
["embed_dim", 20],
["alpha", 0.65],
["xmax", 75]]
PARAMS_WITH_TEST_VALUES += BASE_PARAMS
@pytest.fixture
def count_matrix():
return np.array([
[ 4., 4., 2., 0.],
def main():
# parse arguments
global args
parser = parse_arguments()
args = parser.parse_args()
# exp setup: logger, distributed mode and seeds
init_distributed_mode(args)
init_signal_handler()
fix_random_seeds(args.seed)
logger, training_stats = initialize_exp(args, "epoch", "loss")
if args.rank == 0:
writer = SummaryWriter(args.dump_path)
else:
writer = None
# build data
train_dataset = AVideoDataset(
ds_name=args.ds_name,
root_dir=args.root_dir,
mode='train',
path_to_data_dir=args.data_path,
num_frames=args.num_frames,
target_fps=args.target_fps,
sample_rate=args.sample_rate,
num_train_clips=args.num_train_clips,
train_crop_size=args.train_crop_size,
test_crop_size=args.test_crop_size,
num_data_samples=args.num_data_samples,
colorjitter=args.colorjitter,
use_grayscale=args.use_grayscale,
use_gaussian=args.use_gaussian,
temp_jitter=True,
decode_audio=True,
aug_audio=None,
num_sec=args.num_sec_aud,
aud_sample_rate=args.aud_sample_rate,
aud_spec_type=args.aud_spec_type,
use_volume_jittering=args.use_volume_jittering,
use_temporal_jittering=args.use_audio_temp_jittering,
z_normalize=args.z_normalize,
dual_data=args.dual_data
)
sampler = torch.utils.data.distributed.DistributedSampler(train_dataset)
train_loader = torch.utils.data.DataLoader(
train_dataset,
sampler=sampler,
batch_size=args.batch_size,
num_workers=args.workers,
pin_memory=True,
drop_last=True
)
logger.info("Loaded data with {} videos.".format(len(train_dataset)))
# Load model
model = load_model(
vid_base_arch=args.vid_base_arch,
aud_base_arch=args.aud_base_arch,
use_mlp=args.use_mlp,
num_classes=args.mlp_dim,
pretrained=False,
norm_feat=False,
use_max_pool=False,
headcount=args.headcount,
)
# synchronize batch norm layers
if args.sync_bn == "pytorch":
model = nn.SyncBatchNorm.convert_sync_batchnorm(model)
elif args.sync_bn == "apex":
process_group = None
if args.world_size // 8 > 0:
process_group = apex.parallel.create_syncbn_process_group(args.world_size // 8)
model = apex.parallel.convert_syncbn_model(model, process_group=process_group)
# copy model to GPU
model = model.cuda()
if args.rank == 0:
logger.info(model)
logger.info("Building model done.")
# build optimizer
optimizer = torch.optim.SGD(
model.parameters(),
lr=args.base_lr,
momentum=0.9,
weight_decay=args.wd,
)
if args.use_warmup_scheduler:
lr_scheduler = GradualWarmupScheduler(
optimizer,
multiplier=args.world_size,
total_epoch=args.warmup_epochs,
after_scheduler=None
)
else:
lr_scheduler = None
logger.info("Building optimizer done.")
# init mixed precision
if args.use_fp16:
model, optimizer = apex.amp.initialize(model, optimizer, opt_level="O1")
logger.info("Initializing mixed precision done.")
# wrap model
model = nn.parallel.DistributedDataParallel(
model,
device_ids=[args.gpu_to_work_on],
find_unused_parameters=True,
)
# SK-Init
N_dl = len(train_loader)
N = len(train_loader.dataset)
N_distr = N_dl * train_loader.batch_size
selflabels = torch.zeros((N, args.headcount), dtype=torch.long, device='cuda')
global sk_schedule
sk_schedule = (args.epochs * N_dl * (np.linspace(0, 1, args.nopts) ** args.schedulepower)[::-1]).tolist()
# to make sure we don't make it empty
sk_schedule = [(args.epochs + 2) * N_dl] + sk_schedule
logger.info(f'remaining SK opts @ epochs {[np.round(1.0 * t / N_dl, 2) for t in sk_schedule]}')
# optionally resume from a checkpoint
to_restore = {"epoch": 0, 'selflabels': selflabels, 'dist':args.dist}
restart_from_checkpoint(
os.path.join(args.dump_path, "checkpoint.pth.tar"),
run_variables=to_restore,
model=model,
optimizer=optimizer,
amp=apex.amp if args.use_fp16 else None,
)
start_epoch = to_restore["epoch"]
selflabels = to_restore["selflabels"]
args.dist = to_restore["dist"]
# Set CuDNN benhcmark
cudnn.benchmark = True
# Restart schedule correctly
if start_epoch != 0:
include = [(qq / N_dl > start_epoch) for qq in sk_schedule]
# (total number of sk-opts) - (number of sk-opts outstanding)
global sk_counter
sk_counter = len(sk_schedule) - sum(include)
sk_schedule = (np.array(sk_schedule)[include]).tolist()
if lr_scheduler:
[lr_scheduler.step() for _ in range(to_restore['epoch'])]
if start_epoch == 0:
train_loader.sampler.set_epoch(999)
warmup_batchnorm(args, model, train_loader, batches=20, group=group)
for epoch in range(start_epoch, args.epochs):
# train the network for one epoch
logger.info("============ Starting epoch %i ... ============" % epoch)
if writer:
writer.add_scalar('train/epoch', epoch, epoch)
# set sampler
train_loader.sampler.set_epoch(epoch)
# train the network
scores, selflabels = train(
train_loader, model, optimizer, epoch, writer, selflabels)
training_stats.update(scores)
# Update LR scheduler
if lr_scheduler:
lr_scheduler.step()
# save checkpoints
if args.rank == 0:
save_dict = {
"epoch": epoch + 1,
"dist": args.dist,
"model": model.state_dict(),
"optimizer": optimizer.state_dict(),
"selflabels": selflabels
}
if args.use_fp16:
save_dict["amp"] = apex.amp.state_dict()
torch.save(
save_dict,
os.path.join(args.dump_path, "checkpoint.pth.tar"),
)
if epoch % args.checkpoint_freq == 0 or epoch == args.epochs - 1:
shutil.copyfile(
os.path.join(args.dump_path, "checkpoint.pth.tar"),
os.path.join(args.dump_checkpoints, "ckp-" + str(epoch) + ".pth")
)