try:
uvd.x_telescope.value, uvd.y_telescope.value, uvd.z_telescope.value = aa.get_xyz_telescope(
)
except AttributeError:
pass
#Frequency array
uvd.freq_array.value = n.array([aa.get_afreqs() * 1e9])
#Baseline array:
ant_exclude = []
if hasattr(uvd, 'bad_antenna'):
ant_exclude = uvd.bad_antenna #List antennas to be excluded here, for whatever reason.
bls = n.array([
uvd.antnums_to_baseline(j, i, attempt256=True) for i in range(0, len(aa))
for j in range(i, len(aa)) if not j in ant_exclude and not i in ant_exclude
])
uvd.baseline_array.value = n.tile(bls, uvd.Ntimes.value)
#number of baselines
nbl = len(bls)
uvd.Nbls.value = nbl
#Antennas
uvd.antenna_indices.value = n.arange(1, Nants + 1, 1) #1 indexed, not 0
uvd.antenna_names.value = ["ANT" + str(i) for i in uvd.antenna_indices.value]
uvd.antenna_positions.value = n.array([ant.pos for ant in aa])
uvd.ant_1_array.value, uvd.ant_2_array.value = \
uvd.baseline_to_antnums(uvd.baseline_array.value)
uvd.dateobs.value = tzero
dt = (tfin - tzero)/ float(uvd.Ntimes.value * int(nout))
try:
uvd.x_telescope.value, uvd.y_telescope.value, uvd.z_telescope.value = aa.get_xyz_telescope()
except AttributeError:
pass
#Frequency array
uvd.freq_array.value = n.array([aa.get_afreqs()* 1e9])
#Baseline array:
ant_exclude=[]
if hasattr(uvd,'bad_antenna'):
ant_exclude = uvd.bad_antenna #List antennas to be excluded here, for whatever reason.
bls = n.array([uvd.antnums_to_baseline(j,i,attempt256=True)
for i in range(0,len(aa))
for j in range(i,len(aa)) if not j in ant_exclude and not i in ant_exclude ])
uvd.baseline_array.value = n.tile(bls, uvd.Ntimes.value)
#number of baselines
nbl = len(bls)
uvd.Nbls.value = nbl
#Antennas
uvd.antenna_indices.value = n.arange(1,Nants+1,1) #1 indexed, not 0
uvd.antenna_names.value = ["ANT"+str(i) for i in uvd.antenna_indices.value]
uvd.antenna_positions.value = n.array([ant.pos for ant in aa])
uvd.ant_1_array.value, uvd.ant_2_array.value = \
uvd.baseline_to_antnums(uvd.baseline_array.value)
class TestUVmethods(unittest.TestCase):
def setUp(self):
self.uv_object = UVData()
self.uv_object.Nants_telescope.value = 128
self.testfile = '../data/day2_TDEM0003_10s_norx_1src_1spw.uvfits'
def tearDown(self):
del(self.uv_object)
def test_bl2ij(self):
self.assertEqual(self.uv_object.baseline_to_antnums(67585),
(0, 0))
Nants = self.uv_object.Nants_telescope.value
self.uv_object.Nants_telescope.value = 2049
self.assertRaises(StandardError, self.uv_object.baseline_to_antnums, 67585)
self.uv_object.Nants_telescope.value = Nants # reset
def test_ij2bl(self):
self.assertEqual(self.uv_object.antnums_to_baseline(0, 0),
67585)
self.assertEqual(self.uv_object.antnums_to_baseline(257, 256),
592130)
# Check attempt256
self.assertEqual(self.uv_object.antnums_to_baseline(0, 0, attempt256=True),
257)
self.assertEqual(self.uv_object.antnums_to_baseline(257, 256,
attempt256=True), 592130)
Nants = self.uv_object.Nants_telescope.value
self.uv_object.Nants_telescope.value = 2049
self.assertRaises(StandardError, self.uv_object.antnums_to_baseline, 0, 0)
self.uv_object.Nants_telescope.value = Nants # reset
def test_data_equality(self):
try:
self.uv_object.check()
except ValueError:
self.uv_object.read(self.testfile, 'uvfits')
self.assertEqual(self.uv_object, self.uv_object)
self.uv_object2 = copy.deepcopy(self.uv_object)
self.uv_object2.data_array.value[0, 0, 0, 0] += 1 # Force data to be not equal
self.assertNotEqual(self.uv_object, self.uv_object2)
# check class equality test
self.assertNotEqual(self.uv_object, self.uv_object.data_array)
def test_setXYZ_from_LatLon(self):
self.uv_object.latitude.set_degrees(-26.7)
self.uv_object.longitude.set_degrees(116.7)
self.uv_object.altitude.value = None
# Test that exception is raised.
self.assertRaises(ValueError, self.uv_object.setXYZ_from_LatLon)
self.uv_object.altitude.value = 377.8
status = self.uv_object.setXYZ_from_LatLon()
# Got reference by forcing http://www.oc.nps.edu/oc2902w/coord/llhxyz.htm
# to give additional precision.
ref_xyz = (-2562123.42683, 5094215.40141, -2848728.58869)
out_xyz = (self.uv_object.x_telescope.value, self.uv_object.y_telescope.value,
self.uv_object.z_telescope.value)
self.assertTrue(np.allclose(ref_xyz, out_xyz, rtol=0, atol=1e-3))
def test_check(self):
try:
self.uv_object.check()
except ValueError:
self.uv_object.read(self.testfile, 'uvfits')
self.assertTrue(self.uv_object.check())
# Now break it in every way I can.
# String cases
units = self.uv_object.vis_units.value
self.uv_object.vis_units.value = 1
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.vis_units.value = units # reset it
# Single value cases
Nblts = self.uv_object.Nblts.value
self.uv_object.Nblts.value = 4
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.Nblts.value = np.float(Nblts)
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.Nblts.value = Nblts # reset
# Array cases
data = self.uv_object.data_array.value
self.uv_object.data_array.value = np.array([4, 5, 6], dtype=np.complex64)
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.data_array.value = np.real(data)
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.data_array.value = data # reset
# List cases
antenna_names = self.uv_object.antenna_names.value
self.uv_object.antenna_names.value = [1] * self.uv_object.antenna_names.expected_size(self.uv_object)[0]
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.antenna_names.value = antenna_names # reset
# Sanity check
uvws = self.uv_object.uvw_array.value
self.uv_object.uvw_array.value = 1e-4 * np.ones_like(self.uv_object.uvw_array.value)
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.uvw_array.value = uvws
self.assertTrue(self.uv_object.check())
class TestUVmethods(unittest.TestCase):
def setUp(self):
self.uv_object = UVData()
self.uv_object.Nants_telescope.value = 128
self.testfile = '../data/day2_TDEM0003_10s_norx_1src_1spw.uvfits'
def tearDown(self):
del (self.uv_object)
def test_bl2ij(self):
self.assertEqual(self.uv_object.baseline_to_antnums(67585), (0, 0))
Nants = self.uv_object.Nants_telescope.value
self.uv_object.Nants_telescope.value = 2049
self.assertRaises(StandardError, self.uv_object.baseline_to_antnums,
67585)
self.uv_object.Nants_telescope.value = Nants # reset
def test_ij2bl(self):
self.assertEqual(self.uv_object.antnums_to_baseline(0, 0), 67585)
self.assertEqual(self.uv_object.antnums_to_baseline(257, 256), 592130)
# Check attempt256
self.assertEqual(
self.uv_object.antnums_to_baseline(0, 0, attempt256=True), 257)
self.assertEqual(
self.uv_object.antnums_to_baseline(257, 256, attempt256=True),
592130)
Nants = self.uv_object.Nants_telescope.value
self.uv_object.Nants_telescope.value = 2049
self.assertRaises(StandardError, self.uv_object.antnums_to_baseline, 0,
0)
self.uv_object.Nants_telescope.value = Nants # reset
def test_data_equality(self):
try:
self.uv_object.check()
except ValueError:
self.uv_object.read(self.testfile, 'uvfits')
self.assertEqual(self.uv_object, self.uv_object)
self.uv_object2 = copy.deepcopy(self.uv_object)
self.uv_object2.data_array.value[0, 0, 0,
0] += 1 # Force data to be not equal
self.assertNotEqual(self.uv_object, self.uv_object2)
# check class equality test
self.assertNotEqual(self.uv_object, self.uv_object.data_array)
def test_setXYZ_from_LatLon(self):
self.uv_object.latitude.set_degrees(-26.7)
self.uv_object.longitude.set_degrees(116.7)
self.uv_object.altitude.value = None
# Test that exception is raised.
self.assertRaises(ValueError, self.uv_object.setXYZ_from_LatLon)
self.uv_object.altitude.value = 377.8
status = self.uv_object.setXYZ_from_LatLon()
# Got reference by forcing http://www.oc.nps.edu/oc2902w/coord/llhxyz.htm
# to give additional precision.
ref_xyz = (-2562123.42683, 5094215.40141, -2848728.58869)
out_xyz = (self.uv_object.x_telescope.value,
self.uv_object.y_telescope.value,
self.uv_object.z_telescope.value)
self.assertTrue(np.allclose(ref_xyz, out_xyz, rtol=0, atol=1e-3))
def test_check(self):
try:
self.uv_object.check()
except ValueError:
self.uv_object.read(self.testfile, 'uvfits')
self.assertTrue(self.uv_object.check())
# Now break it in every way I can.
# String cases
units = self.uv_object.vis_units.value
self.uv_object.vis_units.value = 1
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.vis_units.value = units # reset it
# Single value cases
Nblts = self.uv_object.Nblts.value
self.uv_object.Nblts.value = 4
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.Nblts.value = np.float(Nblts)
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.Nblts.value = Nblts # reset
# Array cases
data = self.uv_object.data_array.value
self.uv_object.data_array.value = np.array([4, 5, 6],
dtype=np.complex64)
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.data_array.value = np.real(data)
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.data_array.value = data # reset
# List cases
antenna_names = self.uv_object.antenna_names.value
self.uv_object.antenna_names.value = [
1
] * self.uv_object.antenna_names.expected_size(self.uv_object)[0]
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.antenna_names.value = antenna_names # reset
# Sanity check
uvws = self.uv_object.uvw_array.value
self.uv_object.uvw_array.value = 1e-4 * np.ones_like(
self.uv_object.uvw_array.value)
self.assertRaises(ValueError, self.uv_object.check)
self.uv_object.uvw_array.value = uvws
self.assertTrue(self.uv_object.check())