def update_notebook_by_run(path):
rundb.reset_run(path)
logging.debug(u'update_notebook_by_run {}'.format(path))
# init runner
with codecs.open(path, 'r', 'utf8') as fp:
nb = read(fp, IPYNB_VER)
r = NotebookRunner(nb)
r.clear_outputs()
# run config & startup
run_init(r, path)
# run cells
cellcnt = r.cellcnt
rundb.start_run(path, cellcnt)
err = None
memory_used = []
try:
r.run_notebook(memory_used, lambda cur: _progress_cell(path, cur))
run_code(r, "if 'manifest_' in globals() and manifest_ is not None: "
"manifest_._check_output_hdf()")
except NotebookError, e:
logging.debug("except NotebookError")
err = unicode(e)
def _write_result(self, elapsed, max_mem, err):
logging.debug(u'_write_result {}'.format(self._path))
with codecs.open(self._path, 'r', 'utf8') as fp:
nb = read(fp, IPYNB_VER)
logging.debug(nb)
nr = NotebookRunner(nb)
try:
nr.run_notebook()
except NotebookError, e:
merr = unicode(e)
logging.error(merr)