def __init__(self):
# read configuration from config.ini/[EmailSetting]
cfg = gc.EmailConfig()
self._enable = cfg.email_enable()
self._host = cfg.email_host()
self._port = cfg.email_port()
self._sender = cfg.email_sender()
self._password = cfg.email_password()
self._receiver = cfg.email_receiver()
self._receiver_list = self._receiver.split(',')
self._encrypt = cfg.email_encrypt()
self._anonymous = cfg.email_anonymous()
self._timeout = 5
def __init__(self, strIP, intPort, strPWD, intTO):
self._host = strIP
self._port = intPort
self._password = strPWD
self._timeout = intTO
self._product = gc.General().get_PRODUCT()
self._strLoginPrompt = 'Enter password'
self._strMainMenuPrompt = 'Coredump Menu'
self._strCLIPrompt = 'CLI>'
self._strAHPrompt = 'AH_CLI>'
self._strCLIConflict = 'Another session owns the CLI'
self.Connection = None
self.telnet_connect()
def main():
# Parse arguments
fastaFileNames = sys.argv[1:]
# Ensure prerequisite files are present
verifyConfigFiles()
verifyFastaFiles(fastaFileNames=fastaFileNames)
# Read the config file.
config = GetConfig.getConfig()
# Initialize Assembler object
assembler = initializeAssembler(config=config,
fastaFileNames=fastaFileNames)
# Run with user specified configuration and input files
runAssembly(config=config, fastaFileNames=fastaFileNames, a=assembler)
import array from collections import OrderedDict as odd import datetime from functools import total_ordering import os import re import time import Conn as conn import DB as db import GetConfig as gc import Sundry as s # <<<Get Config Field>>> objSwitchConfig = gc.SwitchConfig() swcfg = gc.SwitchConfig() list_sw_IP = swcfg.list_switch_IP() list_sw_alias = swcfg.list_switch_alias() ssh_port = swcfg.SSH_port() user = swcfg.username() passwd = swcfg.password() list_sw_ports = swcfg.list_switch_ports() tuplThresholdTotal = swcfg.threshold_total() setting = gc.Setting() lstPCCommand = setting.PCSANSwitchCommand() strPCFolder = setting.folder_PeriodicCheck() # <<<Get Config Field>>>
# coding:utf-8
import datetime
from mongoengine import Document, connect
from mongoengine.fields import *
import GetConfig as gc
import HAAP as haap
import SANSW as sw
import Sundry as s
# <<<read config >>>
cfgDB = gc.DBConfig()
strDBName = cfgDB.name()
strDBHost = cfgDB.host()
intDBPort = cfgDB.port()
# <<<read config >>>
# connet to the datebase
connect(strDBName, host=strDBHost, port=intDBPort)
def haap_insert(time, origin, info):
"""
@note: monitoHAAP数据插入
"""
HAAP().insert(time, origin, info)
def haap_last_record():
# coding:utf-8 from __future__ import print_function import os import sys import time import re import Conn as conn import Sundry as s import GetConfig as gc from collections import OrderedDict as odd # <<<Get Config Field>>> objHAAPConfig = gc.EngineConfig() haapcfg = gc.EngineConfig() list_engines_IP = haapcfg.list_engines_IP() list_engines_alias = haapcfg.list_engines_alias() telnet_port = haapcfg.telnet_port() FTP_port = haapcfg.FTP_port() passwd = haapcfg.password() trace_level_cfg = haapcfg.trace_level() setting = gc.Setting() strCFGFolder = setting.folder_cfgbackup() strTraceFolder = setting.folder_trace() strPCFolder = setting.folder_PeriodicCheck() oddHAAPErrorDict = setting.oddRegularTrace() lstPCCommand = setting.PCEngineCommand() # <<<Get Config Field>>>
def setup_class(self):
self.swc = gc.SwitchConfig()
from email.mime.base import MIMEBase
from email.mime.text import MIMEText
from email.mime.image import MIMEImage
from email.header import Header
from email import encoders
import sys
import os
from datetime import *
import GetConfig as gc
try:
import configparser as cp
except Exception:
import ConfigParser as cp
#read config
emailcfg = gc.EmailConfig()
email_host_port = emailcfg.email_host_port()
email_enable = emailcfg.email_enable()
email_host = emailcfg.email_host()
email_password = emailcfg.email_password()
email_sender = emailcfg.email_sender()
email_receiver = emailcfg.email_receiver()
email_receiver_list = email_receiver.split(',')
email_sub = emailcfg.email_sub()
def send_warnmail(warninfo_email):
if email_enable == 'no':
return
msg = MIMEMultipart()
msg['Subject'] = email_sub
def setup_class(self):
self.dbc = gc.DBConfig()
def test_read_config_file():
readValue = gc.read_config_file()
assert readValue
def setup_class(self):
self.ec = gc.EngineConfig()
def setup_class(self):
self.s = gc.Setting()
def test_read_sys_config_file():
sys_readValue = gc.read_sys_config_file()
assert sys_readValue
import time
import operator
import datetime
import SANSW as sw
import HAAP as haap
import Sundry as s
import SendEmail as se
import DB as db
import GetConfig as gc
try:
import configparser as cp
except Exception:
import ConfigParser as cp
# <<<Get Config Field>>>
setting = gc.Setting()
interval_web_refresh = setting.interval_web_refresh()
interval_haap_update = setting.interval_haap_update()
interval_sansw_update = setting.interval_sansw_update()
interval_warning_check = setting.interval_warning_check()
swcfg = gc.SwitchConfig()
tuplThresholdTotal = swcfg.threshold_total()
lst_sansw_IP = swcfg.list_switch_IP()
lst_sansw_alias = swcfg.list_switch_alias()
haapcfg = gc.EngineConfig()
oddEngines = haapcfg._odd_engines()
trace_level_cfg = haapcfg.trace_level()
lst_haap_IP = oddEngines.values()
lst_haap_alias = oddEngines.keys()
def setup_class(self):
self.emc = gc.EmailConfig()
from __future__ import print_function
import sys
import SANSW as sw
import HAAP as haap
import Sundry as s
import Monitor as m
try:
import configparser as cp
except Exception:
import ConfigParser as cp
import GetConfig as gc
# <<<Get Config Field>>>
setting = gc.Setting()
strCFGFolder = setting.folder_cfgbackup()
strTraceFolder = setting.folder_trace()
Version = 'v0.0.1'
# <<<Get Config Field>>>
# <<<Help String Feild>>>
strHelp = '''
Command Description
ptes : Port error count display for SAN switch(s)('porterrshow')
ptcl : Clear port error counter('statsclear' or 'portstatsclear')
sws : Print SAN switch info('switchshow')
signal.signal(signal.SIGINT,signal.SIG_IGN)
signal.signal(signal.SIGQUIT,signal.SIG_IGN)
signal.signal(signal.SIGPIPE,signal.SIG_IGN)
signal.signal(signal.SIGURG,signal.SIG_IGN)
signal.signal(signal.SIGTSTP,signal.SIG_IGN)
signal.signal(signal.SIGTTIN,signal.SIG_IGN)
signal.signal(signal.SIGTTOU,signal.SIG_IGN)
signal.signal(signal.SIGALRM,signal.SIG_IGN)
signal.signal(signal.SIGIOT,signal.SIG_IGN)
signal.signal(signal.SIGABRT,signal.SIG_IGN)
signal.signal(signal.SIGPIPE,signal.SIG_IGN)
signal.signal(signal.SIGCONT,signal.SIG_IGN)
if __name__ == "__main__":
create_daemon()
gsc=GetConfig.GetServerConfig("./conf/server.conf")
global_config_hashtable=gsc.do_read_config()
if(global_config_hashtable is None or len(global_config_hashtable) == 0):
print "Error config file of the tcp server..exit"
exit(1)
global_config_hashtable['SERVER_PORT']=sys.argv[1]
if(len(sys.argv)==3):
if(len(sys.argv[2]) <7):
print_usage(sys.argv[0])
global_config_hashtable['SERVER_IP']=sys.argv[2]
open_log_file()
if(global_config_hashtable['ASYNC_CLIENT_ENABLE'].strip() == "2" or global_config_hashtable['ASYNC_CLIENT_ENABLE'].strip() == "1"):
eteio=EventThread.EventIOThread(global_config_hashtable)
eteio.daemon=True
eteio.start()
#!/usr/bin/python3 import shasta import GetConfig config = GetConfig.getConfig() # To get meaningful results from this, use # the following options when running the assembly, # to make sure all vertices are generated: # --MarkerGraph.allowDuplicateMarkers # --MarkerGraph.minCoverage 1 # --MarkerGraph.minCoverage 1000000000 a = shasta.Assembler() a.accessKmers() a.accessMarkers() a.accessMarkerGraphVertices() a.vertexCoverageStatisticsByKmerId()
import time
import operator
import datetime
import SANSW as sw
import HAAP as haap
import Sundry as s
import SendEmail as se
import DB as db
import GetConfig as gc
try:
import configparser as cp
except Exception:
import ConfigParser as cp
# <<<Get Config Field>>>
setting = gc.Setting()
interval_web_refresh = setting.interval_web_refresh()
interval_haap_update = setting.interval_haap_update()
interval_sansw_update = setting.interval_sansw_update()
interval_warning_check = setting.interval_warning_check()
cycle_msg = gc.Cycle()
cron_cycle = cycle_msg.cron_cycle()
cron_day = cycle_msg.cron_day()
cron_hour = cycle_msg.cron_hour()
cron_minutes = cycle_msg.cron_minutes()
cycle_msg_args = [cron_cycle, cron_day, cron_hour, cron_minutes]
swcfg = gc.SwitchConfig()
tuplThresholdTotal = swcfg.threshold_total()
lst_sansw_IP = swcfg.list_switch_IP()
