def test_mmtf_nofilename(tmpdir):
"""See issue #23"""
# Everyone's favourite BRD4 model
u = mda.fetch_mmtf('4LYI')
with tmpdir.as_cwd():
pkas = propkatraj.get_propka(u)
assert os.path.isfile('current.pka')
def u(self):
top = mmtf.parse(MMTF)
with mock.patch('mmtf.fetch') as mock_fetch:
mock_fetch.return_value = top
return mda.fetch_mmtf('173D') # string is irrelevant
def setUp(self, mock_fetch):
top = mmtf.parse(MMTF)
mock_fetch.return_value = top
self.u = mda.fetch_mmtf('173D') # string is irrelevant
def u(self):
top = mmtf.parse(MMTF)
with mock.patch('mmtf.fetch') as mock_fetch:
mock_fetch.return_value = top
return mda.fetch_mmtf('173D') # string is irrelevant