def Help():
print 'This script generates a plot of differences in mean/median growth rate across adjacent wells for a fixed selection or inducer value'
print 'Usage: <excel sheet>'
exit()
excelfile = sys.argv[1]
expt1 = Experiment(excelfile)
plate_row = ['A','B','C','D','E','F','G','H']
diff_data = {}
for items in plate_row:
junk = []
for i in range(12):
if i+2<=12:
first_well = '%s%s'%(items,i+2)
second_well = '%s%s'%(items,i+1)
tmp1 = TimeCourse(first_well,expt1.extract_timecourse(first_well))
tmp2 = TimeCourse(second_well, expt1.extract_timecourse(second_well))
diff = tmp2.median() - tmp1.median()
junk.append(float('%1.4f'%diff))
if not diff_data.has_key(items):
diff_data[items] = []
diff_data[items] = junk
for keys in diff_data:
outfile = open('%s_outfile'%keys,'w')
for items in diff_data[keys]:
outfile.write('%s\n'%items)
outfile.close()
