def epoching_ARglobal(subject):
epoching_funcs.run_epochs(subject,
epoch_on_first_element=False,
baseline=False)
epoching_funcs.run_epochs(subject,
epoch_on_first_element=True,
baseline=False)
def extract_good_epochs_for_RSA(subject,
tmin,
tmax,
baseline,
decim,
clean,
recompute=True):
"""
This function computes and saves the epochs epoched for the RSA.
:param subject:
:param tmin:
:param tmax:
:param baseline:
:param decim:
:param reject:
:param which_analysis:
:return:
"""
if recompute:
print("=== we are recomputing the epochs but not saving them ! ===")
if clean:
epochs = epoching_funcs.run_epochs(subject,
epoch_on_first_element=False,
tmin=tmin,
tmax=tmax,
baseline=baseline,
whattoreturn='ARglobal')
else:
epochs = epoching_funcs.run_epochs(subject,
epoch_on_first_element=False,
tmin=tmin,
tmax=tmax,
baseline=baseline,
whattoreturn='')
else:
epochs = epoching_funcs.load_epochs_items(subject, cleaned=clean)
epochs.pick_types(meg=True)
epochs.crop(tmin, tmax)
if decim is not None:
epochs.decimate(decim)
if baseline is not None:
epochs.apply_baseline(True)
epochs = epochs[
"TrialNumber > 10 and ViolationInSequence == 0 and StimPosition > 1"]
return epochs
def epoch_full_trial(subject):
epoching_funcs.run_epochs(subject,
epoch_on_first_element=True,
baseline=True)
def epoch_items(subject):
epoching_funcs.run_epochs(subject,
epoch_on_first_element=False,
baseline=None)