コード例 #1
0
 def initServer(self):
     self.listeners = set()
     self.camera = AndorCamera()
     self.camera.set_shutter(0, 1)  #turn on shutter
     self.camera.set_ADchannel(0)
     self.camera.set_HSspeed()
     self.camera.set_VSspeed()
     self.camera.set_preamp(2)  #set pre amp gain to 2
     self.camera.set_emccd_gain(1)
     print self.camera.get_preamp()
     self.lock = DeferredLock()
     self.gui = AndorVideo(self)
コード例 #2
0
ファイル: AndorServer.py プロジェクト: gregllong/barium
 def initServer(self):
     self.listeners = set()
     self.camera = AndorCamera()
     self.lock = DeferredLock()
     self.gui = AndorVideo(self)
コード例 #3
0
ファイル: AndorServer.py プロジェクト: gregllong/barium
class AndorServer(LabradServer):
    """ Contains methods that interact with the Andor CCD Cameras"""

    name = "Andor Server"

    def initServer(self):
        self.listeners = set()
        self.camera = AndorCamera()
        self.lock = DeferredLock()
        self.gui = AndorVideo(self)

    def initContext(self, c):
        """Initialize a new context object."""
        self.listeners.add(c.ID)

    def expireContext(self, c):
        self.listeners.remove(c.ID)

    def getOtherListeners(self,c):
        notified = self.listeners.copy()
        notified.remove(c.ID)
        return notified
    '''
    Temperature Related Settings
    '''
    @setting(0, "Get Temperature", returns = 'v[degC]')
    def get_temperature(self, c):
        """Gets Current Device Temperature"""
        temperature = None
        print 'acquiring: {}'.format(self.get_temperature.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.get_temperature.__name__)
            temperature  = yield deferToThread(self.camera.get_temperature)
        finally:
            print 'releasing: {}'.format(self.get_temperature.__name__)
            self.lock.release()
        if temperature is not None:
            temperature = WithUnit(temperature, 'degC')
            returnValue(temperature)

    @setting(1, "Get Cooler State", returns = 'b')
    def get_cooler_state(self, c):
        """Returns Current Cooler State"""
        cooler_state = None
        print 'acquiring: {}'.format(self.get_cooler_state.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.get_cooler_state.__name__)
            cooler_state = yield deferToThread(self.camera.get_cooler_state)
        finally:
            print 'releasing: {}'.format(self.get_cooler_state.__name__)
            self.lock.release()
        if cooler_state is not None:
            returnValue(cooler_state)

    @setting(3, "Set Temperature", setTemp = 'v[degC]', returns = '')
    def set_temperature(self, c, setTemp):
        """Sets The Target Temperature"""
        print 'acquiring: {}'.format(self.set_temperature.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.set_temperature.__name__)
            yield deferToThread(self.camera.set_temperature, setTemp['degC'])
        finally:
            print 'releasing: {}'.format(self.set_temperature.__name__)
            self.lock.release()

    @setting(4, "Set Cooler On", returns = '')
    def set_cooler_on(self, c):
        """Turns Cooler On"""
        print 'acquiring: {}'.format(self.set_cooler_on.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.set_cooler_on.__name__)
            yield deferToThread(self.camera.set_cooler_on)
        finally:
            print 'releasing: {}'.format(self.set_cooler_on.__name__)
            self.lock.release()

    @setting(5, "Set Cooler Off", returns = '')
    def set_cooler_off(self, c):
        """Turns Cooler On"""
        print 'acquiring: {}'.format(self.set_cooler_off.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.set_cooler_off.__name__)
            yield deferToThread(self.camera.set_cooler_off)
        finally:
            print 'releasing: {}'.format(self.set_cooler_off.__name__)
            self.lock.release()

    '''
    EMCCD Gain Settings
    '''
    @setting(6, "Get EMCCD Gain", returns = 'i')
    def getEMCCDGain(self, c):
        """Gets Current EMCCD Gain"""
        gain = None
        print 'acquiring: {}'.format(self.getEMCCDGain.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.getEMCCDGain.__name__)
            gain = yield deferToThread(self.camera.get_emccd_gain)
        finally:
            print 'releasing: {}'.format(self.getEMCCDGain.__name__)
            self.lock.release()
        if gain is not None:
            returnValue(gain)

    @setting(7, "Set EMCCD Gain", gain = 'i', returns = '')
    def setEMCCDGain(self, c, gain):
        """Sets Current EMCCD Gain"""
        print 'acquiring: {}'.format(self.setEMCCDGain.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.setEMCCDGain.__name__)
            yield deferToThread(self.camera.set_emccd_gain, gain)
        finally:
            print 'releasing: {}'.format(self.setEMCCDGain.__name__)
            self.lock.release()
        if c is not None:
            self.gui.set_gain(gain)
    '''
    Read mode
    '''
    @setting(8, "Get Read Mode", returns = 's')
    def getReadMode(self, c):
        return self.camera.get_read_mode()

    @setting(9, "Set Read Mode", readMode = 's', returns = '')
    def setReadMode(self, c, readMode):
        """Sets Current Read Mode"""
        mode = None
        print 'acquiring: {}'.format(self.setReadMode.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.setReadMode.__name__)
            yield deferToThread(self.camera.set_read_mode, readMode)
        finally:
            print 'releasing: {}'.format(self.setReadMode.__name__)
            self.lock.release()
        if mode is not None:
            returnValue(mode)

    '''
    Shutter Mode
    '''

    @setting(100, "get_shutter_mode", returns = 's')
    def get_shutter_mode(self, c):
        return self.camera.get_shutter_mode()

    @setting(101, "set_shutter_mode", shutterMode = 's', returns = '')
    def set_shutter_mode(self, c, shutterMode):
        """Sets Current Shutter Mode"""
        mode = None
        print 'acquiring: {}'.format(self.set_shutter_mode.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.set_shutter_mode.__name__)
            yield deferToThread(self.camera.set_shutter_mode, shutterMode)
        finally:
            print 'releasing: {}'.format(self.set_shutter_mode.__name__)
            self.lock.release()
        if mode is not None:
            returnValue(mode)

    '''
    Acquisition Mode
    '''
    @setting(10, "Get Acquisition Mode", returns = 's')
    def getAcquisitionMode(self, c):
        """Gets Current Acquisition Mode"""
        return self.camera.get_acquisition_mode()

    @setting(11, "Set Acquisition Mode", mode = 's', returns = '')
    def setAcquisitionMode(self, c, mode):
        """Sets Current Acquisition Mode"""
        print 'acquiring: {}'.format(self.setAcquisitionMode.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.setAcquisitionMode.__name__)
            yield deferToThread(self.camera.set_acquisition_mode, mode)
        finally:
            print 'releasing: {}'.format(self.setAcquisitionMode.__name__)
            self.lock.release()
        self.gui.set_acquisition_mode(mode)
    '''
    Trigger Mode
    '''
    @setting(12, "Get Trigger Mode", returns = 's')
    def getTriggerMode(self, c):
        """Gets Current Trigger Mode"""
        return self.camera.get_trigger_mode()

    @setting(13, "Set Trigger Mode", mode = 's', returns = '')
    def setTriggerMode(self, c, mode):
        """Sets Current Trigger Mode"""
        print 'acquiring: {}'.format(self.setTriggerMode.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.setTriggerMode.__name__)
            yield deferToThread(self.camera.set_trigger_mode, mode)
        finally:
            print 'releasing: {}'.format(self.setTriggerMode.__name__)
            self.lock.release()
        self.gui.set_trigger_mode(mode)

    '''
    Exposure Time
    '''
    @setting(14, "Get Exposure Time", returns = 'v[s]')
    def getExposureTime(self, c):
        """Gets Current Exposure Time"""
        time = self.camera.get_exposure_time()
        return WithUnit(time, 's')

    @setting(15, "Set Exposure Time", expTime = 'v[s]', returns = 'v[s]')
    def setExposureTime(self, c, expTime):
        """Sets Current Exposure Time"""
        print 'acquiring: {}'.format(self.setExposureTime.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.setExposureTime.__name__)
            yield deferToThread(self.camera.set_exposure_time, expTime['s'])
        finally:
            print 'releasing: {}'.format(self.setExposureTime.__name__)
            self.lock.release()
        #need to request the actual set value because it may differ from the request when the request is not possible
        time = self.camera.get_exposure_time()
        if c is not None:
            self.gui.set_exposure(time)
        returnValue(WithUnit(time, 's'))
    '''
    Image Region
    '''
    @setting(16, "Get Image Region", returns = '*i')
    def getImageRegion(self, c):
        """Gets Current Image Region"""
        return self.camera.get_image()

    @setting(17, "Set Image Region", horizontalBinning = 'i', verticalBinning = 'i', horizontalStart = 'i', horizontalEnd = 'i', verticalStart = 'i', verticalEnd = 'i', returns = '')
    def setImageRegion(self, c, horizontalBinning, verticalBinning, horizontalStart, horizontalEnd, verticalStart, verticalEnd):
        """Sets Current Image Region"""
        print 'acquiring: {}'.format(self.setImageRegion.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.setImageRegion.__name__)
            yield deferToThread(self.camera.set_image, horizontalBinning, verticalBinning, horizontalStart, horizontalEnd, verticalStart, verticalEnd)
        finally:
            print 'releasing: {}'.format(self.setImageRegion.__name__)
            self.lock.release()
    '''
    Acquisition
    '''
    @setting(18, "Start Acquisition", returns = '')
    def startAcquisition(self, c):
        print 'acquiring: {}'.format(self.startAcquisition.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.startAcquisition.__name__)
            #speeds up the call to start_acquisition
            yield deferToThread(self.camera.prepare_acqusition)
            yield deferToThread(self.camera.start_acquisition)
            #necessary so that start_acquisition call completes even for long kinetic series
            #yield self.wait(0.050)
            yield self.wait(0.1)
        finally:
            print 'releasing: {}'.format(self.startAcquisition.__name__)
            self.lock.release()

    @setting(19, "Wait For Acquisition", returns = '')
    def waitForAcquisition(self, c):
        print 'acquiring: {}'.format(self.waitForAcquisition.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.waitForAcquisition.__name__)
            yield deferToThread(self.camera.wait_for_acquisition)
        finally:
            print 'releasing: {}'.format(self.waitForAcquisition.__name__)
            self.lock.release()

    @setting(20, "Abort Acquisition", returns = '')
    def abortAcquisition(self, c):
        if c is not None and self.gui.live_update_running:
            yield self.gui.stop_live_display()
        print 'acquiring: {}'.format(self.abortAcquisition.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.abortAcquisition.__name__)
            yield deferToThread(self.camera.abort_acquisition)
        finally:
            print 'releasing: {}'.format(self.abortAcquisition.__name__)
            self.lock.release()

    @setting(21, "Get Acquired Data", num_images = 'i',returns = '*i')
    def getAcquiredData(self, c, num_images = 1):
        """Get the acquired images"""
        print 'acquiring: {}'.format(self.getAcquiredData.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.getAcquiredData.__name__)
            image = yield deferToThread(self.camera.get_acquired_data, num_images)
        finally:
            print 'releasing: {}'.format(self.getAcquiredData.__name__)
            self.lock.release()
        returnValue(image)

    @setting(33, "Get Summed Data", num_images = 'i', returns = '*i')
    def getSummedData(self, c, num_images = 1):
        ''' Get the counts with the vertical axis summed over. '''

        print 'acquiring: {}'.format(self.getAcquiredData.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired: {}'.format(self.getAcquiredData.__name__)
            images = yield deferToThread(self.camera.get_acquired_data, num_images)
            hbin, vbin, hstart, hend, vstart, vend = self.camera.get_image()
            x_pixels = int( (hend - hstart + 1.) / (hbin) )
            y_pixels = int(vend - vstart + 1.) / (vbin)
            images = np.reshape(images, (num_images, y_pixels, x_pixels))
            images = images.sum(axis=1)
            images = np.ravel(images, order='C')
            images = images.tolist()
        finally:
            print 'releasing: {}'.format(self.getAcquiredData.__name__)
            self.lock.release()
        returnValue(images)
    '''
    General
    '''
    @setting(22, "Get Camera Serial Number", returns = 'i')
    def getCameraSerialNumber(self, c):
        """Gets Camera Serial Number"""
        return self.camera.get_camera_serial_number()

    @setting(23, "Get Most Recent Image", returns = '*i')
    def getMostRecentImage(self, c):
        """Get all Data"""
#         print 'acquiring: {}'.format(self.getMostRecentImage.__name__)
        yield self.lock.acquire()
        try:
#             print 'acquired : {}'.format(self.getMostRecentImage.__name__)
            image = yield deferToThread(self.camera.get_most_recent_image)
        finally:
#             print 'releasing: {}'.format(self.getMostRecentImage.__name__)
            self.lock.release()
        returnValue(image)

    @setting(24, "Start Live Display", returns = '')
    def startLiveDisplay(self, c):
        """Starts live display of the images on the GUI"""
        yield self.gui.start_live_display()

    @setting(25, "Is Live Display Running", returns = 'b')
    def isLiveDisplayRunning(self, c):
        return self.gui.live_update_running

    @setting(26, "Get Number Kinetics", returns = 'i')
    def getNumberKinetics(self, c):
        """Gets Number Of Scans In A Kinetic Cycle"""
        return self.camera.get_number_kinetics()

    @setting(27, "Set Number Kinetics", numKin = 'i', returns = '')
    def setNumberKinetics(self, c, numKin):
        """Sets Number Of Scans In A Kinetic Cycle"""
        print 'acquiring: {}'.format(self.setNumberKinetics.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.setNumberKinetics.__name__)
            yield deferToThread(self.camera.set_number_kinetics, numKin)
        finally:
            print 'releasing: {}'.format(self.setNumberKinetics.__name__)
            self.lock.release()
    # UPDATED THE TIMEOUT. FIX IT LATER
    @setting(28, "Wait For Kinetic", timeout = 'v[s]',returns = 'b')
    def waitForKinetic(self, c, timeout = WithUnit(1,'s')):
        '''Waits until the given number of kinetic images are completed'''
        requestCalls = int(timeout['s'] / 0.050 ) #number of request calls
        for i in range(requestCalls):
            print 'acquiring: {}'.format(self.waitForKinetic.__name__)
            yield self.lock.acquire()
            try:
                print 'acquired : {}'.format(self.waitForKinetic.__name__)
                status = yield deferToThread(self.camera.get_status)
                #useful for debugging of how many iterations have been completed in case of missed trigger pulses
                a,b = yield deferToThread(self.camera.get_series_progress)
                print a,b
                print status
            finally:
                print 'releasing: {}'.format(self.waitForKinetic.__name__)
                self.lock.release()
            if status == 'DRV_IDLE':
                returnValue(True)
            yield self.wait(0.050)
        returnValue(False)

    @setting(31, "Get Detector Dimensions", returns = 'ww')
    def get_detector_dimensions(self, c):
        print 'acquiring: {}'.format(self.get_detector_dimensions.__name__)
        yield self.lock.acquire()
        try:
            print 'acquired : {}'.format(self.get_detector_dimensions.__name__)
            dimensions = yield deferToThread(self.camera.get_detector_dimensions)
        finally:
            print 'releasing: {}'.format(self.get_detector_dimensions.__name__)
            self.lock.release()
        returnValue(dimensions)

    @setting(32, "getemrange", returns = '(ii)')
    def getemrange(self, c):
        #emrange = yield self.camera.get_camera_em_gain_range()
        #returnValue(emrange)
        return self.camera.get_camera_em_gain_range()


    def wait(self, seconds, result=None):
        """Returns a deferred that will be fired later"""
        d = Deferred()
        reactor.callLater(seconds, d.callback, result)
        return d

    def stop(self):
        self._stopServer()

    @inlineCallbacks
    def stopServer(self):
        """Shuts down camera before closing"""
        try:
            if self.gui.live_update_running:
                yield self.gui.stop_live_display()
            print 'acquiring: {}'.format(self.stopServer.__name__)
            yield self.lock.acquire()
            print 'acquired : {}'.format(self.stopServer.__name__)
            self.camera.shut_down()
            print 'releasing: {}'.format(self.stopServer.__name__)
            self.lock.release()
        except Exception:
            #not yet created
            pass